Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS302E12f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58086-1|AAC47123.1| 803|Caenorhabditis elegans CUL-4 protein. 142 1e-34
U29536-1|AAA68791.3| 840|Caenorhabditis elegans Cullin protein ... 142 1e-34
U58085-1|AAC47122.1| 780|Caenorhabditis elegans CUL-3 protein. 118 2e-27
AC024744-3|AAK72067.1| 777|Caenorhabditis elegans Cullin protei... 118 2e-27
Z35639-3|CAA84695.2| 780|Caenorhabditis elegans Hypothetical pr... 101 2e-22
U58083-1|AAC47120.1| 780|Caenorhabditis elegans CUL-1 protein. 101 2e-22
Z92822-4|CAD18893.2| 791|Caenorhabditis elegans Hypothetical pr... 95 3e-20
Z92822-3|CAB07302.3| 774|Caenorhabditis elegans Hypothetical pr... 95 3e-20
Z92822-2|CAB70188.2| 850|Caenorhabditis elegans Hypothetical pr... 95 3e-20
U58084-1|AAC47121.1| 743|Caenorhabditis elegans CUL-2 protein. 87 5e-18
Z92822-5|CAD45612.3| 743|Caenorhabditis elegans Hypothetical pr... 87 7e-18
Z70783-1|CAA94852.2| 765|Caenorhabditis elegans Hypothetical pr... 83 9e-17
Z77666-5|CAB01230.1| 729|Caenorhabditis elegans Hypothetical pr... 83 1e-16
Z68227-18|CAA92521.1| 869|Caenorhabditis elegans Hypothetical p... 29 1.5
Z68220-11|CAA92493.1| 869|Caenorhabditis elegans Hypothetical p... 29 1.5
AC024805-15|AAK39331.2| 344|Caenorhabditis elegans Hypothetical... 28 3.5
U41552-7|AAU05560.1| 1174|Caenorhabditis elegans Hypothetical pr... 28 4.7
U41552-6|AAU05561.1| 1203|Caenorhabditis elegans Hypothetical pr... 28 4.7
AC006684-12|AAN60497.1| 528|Caenorhabditis elegans Hypothetical... 28 4.7
AC006684-11|AAF39968.1| 550|Caenorhabditis elegans Hypothetical... 28 4.7
Z48621-2|CAA88547.1| 536|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z47809-7|CAA87783.1| 662|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z47808-10|CAA87778.1| 662|Caenorhabditis elegans Hypothetical p... 27 6.2
Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z81110-2|CAB03259.1| 802|Caenorhabditis elegans Hypothetical pr... 27 8.1
>U58086-1|AAC47123.1| 803|Caenorhabditis elegans CUL-4 protein.
Length = 803
Score = 142 bits (345), Expect = 1e-34
Identities = 71/163 (43%), Positives = 98/163 (60%), Gaps = 1/163 (0%)
Frame = +1
Query: 1 GKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKQECGGGFTCKLEGMFKDMELSKDI 180
GKDVFEA+YK+ LAKRL + +SASVDAEK +L KLK ECG FT KLEGMFKDM+ S++
Sbjct: 479 GKDVFEAYYKRGLAKRLFLERSASVDAEKMVLCKLKTECGSAFTYKLEGMFKDMDASENY 538
Query: 181 NITYKQHLSASTETSGPGGVELSVHILTMGFWPTYRACEVRLPTELTRQQEHFTKFYLAK 360
+ Q+L E + ++T +WPTY E+ +P E+ + FY +
Sbjct: 539 GRLFNQYL----EHMNKEKANFTARVITPEYWPTYDTYEINIPKEMRDTLTDYQDFYRVQ 594
Query: 361 HSGRKLHWQPTLGHCVLRANFAQG-NKELQVSLFQALVLLLFN 486
H R + W L V+ A+F G KEL +++Q ++LLLFN
Sbjct: 595 HGNRNVKWHHGLASAVISASFRPGCKKELIATMYQTVILLLFN 637
>U29536-1|AAA68791.3| 840|Caenorhabditis elegans Cullin protein 4
protein.
Length = 840
Score = 142 bits (345), Expect = 1e-34
Identities = 71/163 (43%), Positives = 98/163 (60%), Gaps = 1/163 (0%)
Frame = +1
Query: 1 GKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKQECGGGFTCKLEGMFKDMELSKDI 180
GKDVFEA+YK+ LAKRL + +SASVDAEK +L KLK ECG FT KLEGMFKDM+ S++
Sbjct: 516 GKDVFEAYYKRGLAKRLFLERSASVDAEKMVLCKLKTECGSAFTYKLEGMFKDMDASENY 575
Query: 181 NITYKQHLSASTETSGPGGVELSVHILTMGFWPTYRACEVRLPTELTRQQEHFTKFYLAK 360
+ Q+L E + ++T +WPTY E+ +P E+ + FY +
Sbjct: 576 GRLFNQYL----EHMNKEKANFTARVITPEYWPTYDTYEINIPKEMRDTLTDYQDFYRVQ 631
Query: 361 HSGRKLHWQPTLGHCVLRANFAQG-NKELQVSLFQALVLLLFN 486
H R + W L V+ A+F G KEL +++Q ++LLLFN
Sbjct: 632 HGNRNVKWHHGLASAVISASFRPGCKKELIATMYQTVILLLFN 674
>U58085-1|AAC47122.1| 780|Caenorhabditis elegans CUL-3 protein.
Length = 780
Score = 118 bits (285), Expect = 2e-27
Identities = 62/140 (44%), Positives = 87/140 (62%)
Frame = +1
Query: 4 KDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKQECGGGFTCKLEGMFKDMELSKDIN 183
KDVFE ++K+ LAKRLL+ KS S D EK++L+KLK ECG FT KLE MF+D EL +
Sbjct: 431 KDVFEKYFKQYLAKRLLLDKSCSDDVEKALLAKLKTECGCQFTQKLENMFRDKELWLTLA 490
Query: 184 ITYKQHLSASTETSGPGGVELSVHILTMGFWPTYRACEVRLPTELTRQQEHFTKFYLAKH 363
+++ A +++S+ +LT G WPT + V LP EL+ E FT++Y KH
Sbjct: 491 TSFRDWREAQPTKM---SIDISLRVLTAGVWPTVQCNPVVLPQELSVAYEMFTQYYTEKH 547
Query: 364 SGRKLHWQPTLGHCVLRANF 423
+GRKL LG+ ++A F
Sbjct: 548 TGRKLTINTLLGNADVKATF 567
>AC024744-3|AAK72067.1| 777|Caenorhabditis elegans Cullin protein 3
protein.
Length = 777
Score = 118 bits (285), Expect = 2e-27
Identities = 62/140 (44%), Positives = 87/140 (62%)
Frame = +1
Query: 4 KDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKQECGGGFTCKLEGMFKDMELSKDIN 183
KDVFE ++K+ LAKRLL+ KS S D EK++L+KLK ECG FT KLE MF+D EL +
Sbjct: 431 KDVFEKYFKQYLAKRLLLDKSCSDDVEKALLAKLKTECGCQFTQKLENMFRDKELWLTLA 490
Query: 184 ITYKQHLSASTETSGPGGVELSVHILTMGFWPTYRACEVRLPTELTRQQEHFTKFYLAKH 363
+++ A +++S+ +LT G WPT + V LP EL+ E FT++Y KH
Sbjct: 491 TSFRDWREAQPTKM---SIDISLRVLTAGVWPTVQCNPVVLPQELSVAYEMFTQYYTEKH 547
Query: 364 SGRKLHWQPTLGHCVLRANF 423
+GRKL LG+ ++A F
Sbjct: 548 TGRKLTINTLLGNADVKATF 567
>Z35639-3|CAA84695.2| 780|Caenorhabditis elegans Hypothetical
protein D2045.6 protein.
Length = 780
Score = 101 bits (243), Expect = 2e-22
Identities = 55/168 (32%), Positives = 89/168 (52%)
Frame = +1
Query: 4 KDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKQECGGGFTCKLEGMFKDMELSKDIN 183
KDVF FY K +KRL+ SAS +AE + ++KLK CG +T +L M D ++SKD+
Sbjct: 463 KDVFSKFYTKMFSKRLISELSASDEAEANFITKLKSMCGYEYTARLSKMVNDTQVSKDLT 522
Query: 184 ITYKQHLSASTETSGPGGVELSVHILTMGFWPTYRACEVRLPTELTRQQEHFTKFYLAKH 363
+K+ + G VE +V +L+ G WPT+ + LP +L++ E F +FY K
Sbjct: 523 ADFKE---KKADMLGQKSVEFNVLVLSSGSWPTFPTTPITLPQQLSKTIEIFGQFYNEKF 579
Query: 364 SGRKLHWQPTLGHCVLRANFAQGNKELQVSLFQALVLLLFNDGDNLSL 507
+GR+L W + + + + Q +LLFN+ D+ ++
Sbjct: 580 NGRRLTWVYSQSRGEITSTAFPKKYVFTATTAQMCTMLLFNEQDSYTV 627
>U58083-1|AAC47120.1| 780|Caenorhabditis elegans CUL-1 protein.
Length = 780
Score = 101 bits (243), Expect = 2e-22
Identities = 55/168 (32%), Positives = 89/168 (52%)
Frame = +1
Query: 4 KDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKQECGGGFTCKLEGMFKDMELSKDIN 183
KDVF FY K +KRL+ SAS +AE + ++KLK CG +T +L M D ++SKD+
Sbjct: 463 KDVFSKFYTKMFSKRLISELSASDEAEANFITKLKSMCGYEYTARLSKMVNDTQVSKDLT 522
Query: 184 ITYKQHLSASTETSGPGGVELSVHILTMGFWPTYRACEVRLPTELTRQQEHFTKFYLAKH 363
+K+ + G VE +V +L+ G WPT+ + LP +L++ E F +FY K
Sbjct: 523 ADFKE---KKADMLGQKSVEFNVLVLSSGSWPTFPTTPITLPQQLSKTIEIFGQFYNEKF 579
Query: 364 SGRKLHWQPTLGHCVLRANFAQGNKELQVSLFQALVLLLFNDGDNLSL 507
+GR+L W + + + + Q +LLFN+ D+ ++
Sbjct: 580 NGRRLTWVYSQSRGEITSTAFPKKYVFTATTAQMCTMLLFNEQDSYTV 627
>Z92822-4|CAD18893.2| 791|Caenorhabditis elegans Hypothetical protein
ZK520.4c protein.
Length = 791
Score = 95.1 bits (226), Expect = 3e-20
Identities = 62/185 (33%), Positives = 89/185 (48%), Gaps = 16/185 (8%)
Frame = +1
Query: 4 KDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKQECGGGFTCKLEGMFKDMELSKDIN 183
KD+F+ FY K LA RL+ S S+DAE+ M++KLKQ CG FT KL MF D+ LS++++
Sbjct: 462 KDIFQKFYSKMLANRLIASTSISMDAEELMINKLKQACGYEFTSKLSRMFTDIGLSQELS 521
Query: 184 ITYKQHLSASTETSGPG--GVELSVHILTMGFWP--------------TYRACEVRLPTE 315
+ +H+ A +T P V IL G WP LP
Sbjct: 522 NNFDKHI-ADIKTVQPDVKFVPTQTMILQAGSWPLNAPQLSTNSNNQTAQDVANFHLPRI 580
Query: 316 LTRQQEHFTKFYLAKHSGRKLHWQPTLGHCVLRANFAQGNKELQVSLFQALVLLLFNDGD 495
L + F KFY KH+GRKL W + +R + Q+ ++Q LL F D
Sbjct: 581 LQPVIQEFEKFYTGKHNGRKLTWLFNMSQGDVRLTYLDKQYVAQMYVYQMAALLCFERRD 640
Query: 496 NLSLR 510
+ ++
Sbjct: 641 AILVK 645
>Z92822-3|CAB07302.3| 774|Caenorhabditis elegans Hypothetical
protein ZK520.4b protein.
Length = 774
Score = 95.1 bits (226), Expect = 3e-20
Identities = 62/185 (33%), Positives = 89/185 (48%), Gaps = 16/185 (8%)
Frame = +1
Query: 4 KDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKQECGGGFTCKLEGMFKDMELSKDIN 183
KD+F+ FY K LA RL+ S S+DAE+ M++KLKQ CG FT KL MF D+ LS++++
Sbjct: 445 KDIFQKFYSKMLANRLIASTSISMDAEELMINKLKQACGYEFTSKLSRMFTDIGLSQELS 504
Query: 184 ITYKQHLSASTETSGPG--GVELSVHILTMGFWP--------------TYRACEVRLPTE 315
+ +H+ A +T P V IL G WP LP
Sbjct: 505 NNFDKHI-ADIKTVQPDVKFVPTQTMILQAGSWPLNAPQLSTNSNNQTAQDVANFHLPRI 563
Query: 316 LTRQQEHFTKFYLAKHSGRKLHWQPTLGHCVLRANFAQGNKELQVSLFQALVLLLFNDGD 495
L + F KFY KH+GRKL W + +R + Q+ ++Q LL F D
Sbjct: 564 LQPVIQEFEKFYTGKHNGRKLTWLFNMSQGDVRLTYLDKQYVAQMYVYQMAALLCFERRD 623
Query: 496 NLSLR 510
+ ++
Sbjct: 624 AILVK 628
>Z92822-2|CAB70188.2| 850|Caenorhabditis elegans Hypothetical protein
ZK520.4a protein.
Length = 850
Score = 95.1 bits (226), Expect = 3e-20
Identities = 62/185 (33%), Positives = 89/185 (48%), Gaps = 16/185 (8%)
Frame = +1
Query: 4 KDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKQECGGGFTCKLEGMFKDMELSKDIN 183
KD+F+ FY K LA RL+ S S+DAE+ M++KLKQ CG FT KL MF D+ LS++++
Sbjct: 521 KDIFQKFYSKMLANRLIASTSISMDAEELMINKLKQACGYEFTSKLSRMFTDIGLSQELS 580
Query: 184 ITYKQHLSASTETSGPG--GVELSVHILTMGFWP--------------TYRACEVRLPTE 315
+ +H+ A +T P V IL G WP LP
Sbjct: 581 NNFDKHI-ADIKTVQPDVKFVPTQTMILQAGSWPLNAPQLSTNSNNQTAQDVANFHLPRI 639
Query: 316 LTRQQEHFTKFYLAKHSGRKLHWQPTLGHCVLRANFAQGNKELQVSLFQALVLLLFNDGD 495
L + F KFY KH+GRKL W + +R + Q+ ++Q LL F D
Sbjct: 640 LQPVIQEFEKFYTGKHNGRKLTWLFNMSQGDVRLTYLDKQYVAQMYVYQMAALLCFERRD 699
Query: 496 NLSLR 510
+ ++
Sbjct: 700 AILVK 704
>U58084-1|AAC47121.1| 743|Caenorhabditis elegans CUL-2 protein.
Length = 743
Score = 87.4 bits (207), Expect = 5e-18
Identities = 57/169 (33%), Positives = 85/169 (50%)
Frame = +1
Query: 4 KDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKQECGGGFTCKLEGMFKDMELSKDIN 183
KD+F+ FY K LA RL+ S S+DAE+ M++KLKQ CG FT KL MF D+ LS++++
Sbjct: 445 KDIFQKFYSKMLANRLIASTSISMDAEELMINKLKQACGYEFTSKLSRMFTDIGLSQELS 504
Query: 184 ITYKQHLSASTETSGPGGVELSVHILTMGFWPTYRACEVRLPTELTRQQEHFTKFYLAKH 363
+ +H+ A +T P + F PT L + F KFY KH
Sbjct: 505 NNFDKHI-ADIKTVQP----------DVKFVPTQTMI-------LQPVIQEFEKFYTGKH 546
Query: 364 SGRKLHWQPTLGHCVLRANFAQGNKELQVSLFQALVLLLFNDGDNLSLR 510
+GRKL W + +R + Q+ ++Q LL F D + ++
Sbjct: 547 NGRKLTWLFNMSQGDVRLTYLDKQHVAQMYVYQMAALLCFERRDAILVK 595
>Z92822-5|CAD45612.3| 743|Caenorhabditis elegans Hypothetical
protein ZK520.4d protein.
Length = 743
Score = 87.0 bits (206), Expect = 7e-18
Identities = 57/169 (33%), Positives = 85/169 (50%)
Frame = +1
Query: 4 KDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKQECGGGFTCKLEGMFKDMELSKDIN 183
KD+F+ FY K LA RL+ S S+DAE+ M++KLKQ CG FT KL MF D+ LS++++
Sbjct: 445 KDIFQKFYSKMLANRLIASTSISMDAEELMINKLKQACGYEFTSKLSRMFTDIGLSQELS 504
Query: 184 ITYKQHLSASTETSGPGGVELSVHILTMGFWPTYRACEVRLPTELTRQQEHFTKFYLAKH 363
+ +H+ A +T P + F PT L + F KFY KH
Sbjct: 505 NNFDKHI-ADIKTVQP----------DVKFVPTQTMI-------LQPVIQEFEKFYTGKH 546
Query: 364 SGRKLHWQPTLGHCVLRANFAQGNKELQVSLFQALVLLLFNDGDNLSLR 510
+GRKL W + +R + Q+ ++Q LL F D + ++
Sbjct: 547 NGRKLTWLFNMSQGDVRLTYLDKQYVAQMYVYQMAALLCFERRDAILVK 595
>Z70783-1|CAA94852.2| 765|Caenorhabditis elegans Hypothetical
protein ZK856.1 protein.
Length = 765
Score = 83.4 bits (197), Expect = 9e-17
Identities = 57/175 (32%), Positives = 91/175 (52%), Gaps = 7/175 (4%)
Frame = +1
Query: 4 KDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKQECG--GGFTCKLEGMFKDMELSKD 177
KDVF F++ L++RL++ SA + E+ M++KL+ ECG KL M +D+EL+KD
Sbjct: 427 KDVFMRFHRAHLSRRLILEMSADQEKEEMMVTKLR-ECGMPSDAVNKLSRMLQDIELNKD 485
Query: 178 INITYKQHLSASTETSGPGGVELSVHILTMGFWPTYRACEVR--LPTELTRQQEHFTKFY 351
+N ++K+ L+ + +++ +L G W + +R LP EL FY
Sbjct: 486 MNSSFKKALTGTNNNKSIAD-SINMKVLNGGAWGRGGSERIRFSLPRELEDFVPEMEAFY 544
Query: 352 LAKHSGRKLHWQPTLGHCVLRANFAQGNK-ELQVSLFQALVLLLFND--GDNLSL 507
+H+GRKL W + A G + +L+ + FQ VL FND D +SL
Sbjct: 545 KKQHNGRKLCWMHHWSSGTMVFGTANGGRFDLECTTFQMAVLFCFNDRAHDKISL 599
>Z77666-5|CAB01230.1| 729|Caenorhabditis elegans Hypothetical
protein K08E7.7 protein.
Length = 729
Score = 83.0 bits (196), Expect = 1e-16
Identities = 50/168 (29%), Positives = 87/168 (51%)
Frame = +1
Query: 4 KDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKQECGGGFTCKLEGMFKDMELSKDIN 183
KDVF+ +Y+ ++R++ SAS DAE+ ++ L G +T L M +D ++SKD+
Sbjct: 415 KDVFQLYYQNWFSERIINNSSASDDAEEKFITNLTATEGLEYTRNLVKMVEDAKISKDLT 474
Query: 184 ITYKQHLSASTETSGPGGVELSVHILTMGFWPTYRACEVRLPTELTRQQEHFTKFYLAKH 363
+K TE S ++ +V + T G WP+ ++ LP EL+ + F FY A H
Sbjct: 475 TEFK---DIKTEKS----IDFNVILQTTGAWPSLDQIKIILPRELSTILKEFDTFYNASH 527
Query: 364 SGRKLHWQPTLGHCVLRANFAQGNKELQVSLFQALVLLLFNDGDNLSL 507
+GR+L+W + + + + V+ Q L LFN+ D+ ++
Sbjct: 528 NGRRLNWAYSQCRGEVNSKAFEKKYVFIVTASQLCTLYLFNEQDSFTI 575
>Z68227-18|CAA92521.1| 869|Caenorhabditis elegans Hypothetical
protein F49C12.15 protein.
Length = 869
Score = 29.5 bits (63), Expect = 1.5
Identities = 17/72 (23%), Positives = 39/72 (54%)
Frame = +1
Query: 43 KRLLVGKSASVDAEKSMLSKLKQECGGGFTCKLEGMFKDMELSKDINITYKQHLSASTET 222
+++ GK++S+ EKS + K + G EG F +++ S+ I++ ++++ +
Sbjct: 287 RKIRSGKTSSITEEKSYANICKTKISGDHGKSTEG-FLNVQCSETISVVDQKYIRSEEFK 345
Query: 223 SGPGGVELSVHI 258
G GV +S ++
Sbjct: 346 IGLTGVNVSGNV 357
>Z68220-11|CAA92493.1| 869|Caenorhabditis elegans Hypothetical
protein F49C12.15 protein.
Length = 869
Score = 29.5 bits (63), Expect = 1.5
Identities = 17/72 (23%), Positives = 39/72 (54%)
Frame = +1
Query: 43 KRLLVGKSASVDAEKSMLSKLKQECGGGFTCKLEGMFKDMELSKDINITYKQHLSASTET 222
+++ GK++S+ EKS + K + G EG F +++ S+ I++ ++++ +
Sbjct: 287 RKIRSGKTSSITEEKSYANICKTKISGDHGKSTEG-FLNVQCSETISVVDQKYIRSEEFK 345
Query: 223 SGPGGVELSVHI 258
G GV +S ++
Sbjct: 346 IGLTGVNVSGNV 357
>AC024805-15|AAK39331.2| 344|Caenorhabditis elegans Hypothetical
protein Y51H7C.13 protein.
Length = 344
Score = 28.3 bits (60), Expect = 3.5
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = -1
Query: 344 LVKCSCCRVSSVGRRTSQARYVGQKPIVRM*TDSSTPPGPL 222
+ CS CR+ VGR S G +V ++PP P+
Sbjct: 88 VTNCSVCRLCCVGRNISYRIEDGTTAVVPPAVSGTSPPAPV 128
>U41552-7|AAU05560.1| 1174|Caenorhabditis elegans Hypothetical protein
K07E3.7a protein.
Length = 1174
Score = 27.9 bits (59), Expect = 4.7
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +1
Query: 397 GHCVLRANFAQGNKELQVSLFQAL-VLLLFNDGDNLS 504
G C L ++A SL + L V+LL+NDG N+S
Sbjct: 899 GRCALVTSYAVSKYMAAYSLNEFLSVMLLYNDGTNIS 935
>U41552-6|AAU05561.1| 1203|Caenorhabditis elegans Hypothetical protein
K07E3.7b protein.
Length = 1203
Score = 27.9 bits (59), Expect = 4.7
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +1
Query: 397 GHCVLRANFAQGNKELQVSLFQAL-VLLLFNDGDNLS 504
G C L ++A SL + L V+LL+NDG N+S
Sbjct: 928 GRCALVTSYAVSKYMAAYSLNEFLSVMLLYNDGTNIS 964
>AC006684-12|AAN60497.1| 528|Caenorhabditis elegans Hypothetical
protein T02H6.1b protein.
Length = 528
Score = 27.9 bits (59), Expect = 4.7
Identities = 16/66 (24%), Positives = 34/66 (51%)
Frame = +1
Query: 4 KDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKQECGGGFTCKLEGMFKDMELSKDIN 183
+D E Y++ AK+LL ++ ++ + KL+ + +++ + +EL D+
Sbjct: 76 EDAHERNYRE--AKKLLDKIQSTTTTQEEVAEKLRDDAVARTGTQVKRVADVVELEDDLE 133
Query: 184 ITYKQH 201
I+YK H
Sbjct: 134 ISYKPH 139
>AC006684-11|AAF39968.1| 550|Caenorhabditis elegans Hypothetical
protein T02H6.1a protein.
Length = 550
Score = 27.9 bits (59), Expect = 4.7
Identities = 16/66 (24%), Positives = 34/66 (51%)
Frame = +1
Query: 4 KDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKQECGGGFTCKLEGMFKDMELSKDIN 183
+D E Y++ AK+LL ++ ++ + KL+ + +++ + +EL D+
Sbjct: 76 EDAHERNYRE--AKKLLDKIQSTTTTQEEVAEKLRDDAVARTGTQVKRVADVVELEDDLE 133
Query: 184 ITYKQH 201
I+YK H
Sbjct: 134 ISYKPH 139
>Z48621-2|CAA88547.1| 536|Caenorhabditis elegans Hypothetical
protein R07B1.3 protein.
Length = 536
Score = 27.5 bits (58), Expect = 6.2
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 7/73 (9%)
Frame = +1
Query: 259 LTMGFWPTYRACEVRLPTELTRQQEHFTK-----FYLA--KHSGRKLHWQPTLGHCVLRA 417
L FWPT A +++ P + + H TK F+L+ S ++ +WQ L +
Sbjct: 267 LPASFWPTLEARQIKGPDSGSLSKIHLTKTDELPFFLSFMCRSFKRTYWQDGLVDGIKTM 326
Query: 418 NFAQGNKELQVSL 456
FA +E +L
Sbjct: 327 AFAVPYEEFDTTL 339
>Z47809-7|CAA87783.1| 662|Caenorhabditis elegans Hypothetical
protein D2013.9 protein.
Length = 662
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +1
Query: 163 ELSKDINITYKQHLSASTETSGPGGVELSVHILTM 267
E+ KDIN+T ++ + A+ + P GV +V M
Sbjct: 569 EVQKDINLTIRKAIEAAAKEEAPRGVAPNVQSRAM 603
>Z47808-10|CAA87778.1| 662|Caenorhabditis elegans Hypothetical
protein D2013.9 protein.
Length = 662
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +1
Query: 163 ELSKDINITYKQHLSASTETSGPGGVELSVHILTM 267
E+ KDIN+T ++ + A+ + P GV +V M
Sbjct: 569 EVQKDINLTIRKAIEAAAKEEAPRGVAPNVQSRAM 603
>Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical
protein T01D3.3b protein.
Length = 1011
Score = 27.1 bits (57), Expect = 8.1
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = -1
Query: 458 NNETCSSLLPCAKLALSTQCPSVGCQCSFRPECFAR 351
N ++C S P + +Q S+ C S P CF R
Sbjct: 489 NYQSCGSKCPASCDRPLSQAASIDCALSCEPGCFCR 524
>Z81110-2|CAB03259.1| 802|Caenorhabditis elegans Hypothetical
protein T01D3.3a protein.
Length = 802
Score = 27.1 bits (57), Expect = 8.1
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = -1
Query: 458 NNETCSSLLPCAKLALSTQCPSVGCQCSFRPECFAR 351
N ++C S P + +Q S+ C S P CF R
Sbjct: 280 NYQSCGSKCPASCDRPLSQAASIDCALSCEPGCFCR 315
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,906,215
Number of Sequences: 27780
Number of extensions: 205897
Number of successful extensions: 616
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 583
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 606
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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