Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS302E10f
         (360 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   3.8  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    21   5.1  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    21   5.1  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    21   5.1  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    20   6.7  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    20   6.7  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    20   6.7  

>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.0 bits (42), Expect = 3.8
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -1

Query: 339 NVLERGLFC 313
           N +ERGLFC
Sbjct: 128 NCIERGLFC 136


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 20.6 bits (41), Expect = 5.1
 Identities = 8/33 (24%), Positives = 16/33 (48%)
 Frame = -1

Query: 270 LRSPTKTTCLPLNFFSSSRTSLIWIF*KAFSLG 172
           L +PT T      F+ + + +++W+      LG
Sbjct: 31  LTTPTPTDINSFYFYKTEQFTVLWVLFTMIVLG 63


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 20.6 bits (41), Expect = 5.1
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +1

Query: 67  RNQLRPQSPTSGA 105
           R Q++PQSP+S +
Sbjct: 19  RMQIKPQSPSSSS 31


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 20.6 bits (41), Expect = 5.1
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +1

Query: 67  RNQLRPQSPTSGA 105
           R Q++PQSP+S +
Sbjct: 19  RMQIKPQSPSSSS 31


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 20.2 bits (40), Expect = 6.7
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -3

Query: 235 ELLFELTDKPDL 200
           ELL  L+DKP+L
Sbjct: 428 ELLHALSDKPEL 439


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 20.2 bits (40), Expect = 6.7
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 205 DLDLLKGLQFRHR 167
           DLDL +GL F+ R
Sbjct: 455 DLDLSRGLDFQPR 467


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 20.2 bits (40), Expect = 6.7
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = +3

Query: 78  PTSKPNFGSFTLQKLKKLNYTIRSRSSSMCRCLN 179
           P +  +FG+FT +  K       +  SS+  C N
Sbjct: 11  PAAGFHFGAFTCEGCKSFFGRTYNNISSISECKN 44


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,737
Number of Sequences: 336
Number of extensions: 1346
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7299165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)