Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS302E09f
         (472 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY343324-1|AAQ21381.1|  156|Apis mellifera vacuolar H+ ATP synth...    22   3.8  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    21   8.8  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   8.8  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      21   8.8  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   8.8  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    21   8.8  

>AY343324-1|AAQ21381.1|  156|Apis mellifera vacuolar H+ ATP synthase
           16 kDa proteolipidsubunit protein.
          Length = 156

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -2

Query: 213 GGGWIPSGYCSPRGYVHLPA 154
           GG   P GY   +G+VHL A
Sbjct: 77  GGLEEPKGYTLFKGFVHLGA 96


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 5/16 (31%), Positives = 13/16 (81%)
 Frame = -1

Query: 313 TASLTFFFLCLIFLGV 266
           ++S++F+  C++ LG+
Sbjct: 196 SSSISFYVPCIVMLGI 211


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = -2

Query: 162 LPAAFQQRSTSVDWEGFPLCLEF*LSHSRWYLTARPQ 52
           +P+A Q  STS+    F +  +  LS+   Y   +PQ
Sbjct: 404 IPSALQSYSTSMRDPAFYMLYQKILSYFLRYKKLQPQ 440


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = -2

Query: 162 LPAAFQQRSTSVDWEGFPLCLEF*LSHSRWYLTARPQ 52
           +P+A Q  STS+    F +  +  LS+   Y   +PQ
Sbjct: 404 IPSALQSYSTSMRDPAFYMLYQNILSYFLRYKKLQPQ 440


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +3

Query: 333 DENGKIHRLRRECTGEQ 383
           + +GK+HR  R  TGE+
Sbjct: 158 EHSGKLHRHMRIHTGER 174


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = +2

Query: 185 QYPEGIHPPPGVEASWW 235
           +YP    PPP  + S W
Sbjct: 658 EYPPDSDPPPPDDISGW 674


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,496
Number of Sequences: 438
Number of extensions: 2256
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12682287
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)