Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS302E08f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT024459-1|ABC86521.1|  882|Drosophila melanogaster AT20596p pro...    44   1e-04
BT003798-1|AAO41481.1|  927|Drosophila melanogaster AT25231p pro...    44   1e-04
AE014296-640|AAF47760.1|  882|Drosophila melanogaster CG11526-PA...    44   1e-04
AE014296-639|AAN11560.2|  927|Drosophila melanogaster CG11526-PB...    44   1e-04
DQ162845-1|ABA42953.1| 1715|Drosophila melanogaster TRF2 protein.      29   2.9  
L23146-1|AAA03750.1| 1011|Drosophila melanogaster neuromusculin ...    28   8.8  
AE014296-3753|ABI31268.1| 1036|Drosophila melanogaster CG8779-PB...    28   8.8  
AE014296-3752|AAF51887.4| 1087|Drosophila melanogaster CG8779-PA...    28   8.8  

>BT024459-1|ABC86521.1|  882|Drosophila melanogaster AT20596p
           protein.
          Length = 882

 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 15/32 (46%), Positives = 24/32 (75%)
 Frame = -2

Query: 427 ESNIDLDEEFKENYELWLEQEVYNNEINWDVL 332
           +  ++L + FK NY +WLE+EVYN++ +WD L
Sbjct: 851 DRKVELTDYFKANYAVWLEEEVYNSQTDWDAL 882


>BT003798-1|AAO41481.1|  927|Drosophila melanogaster AT25231p
           protein.
          Length = 927

 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 15/32 (46%), Positives = 24/32 (75%)
 Frame = -2

Query: 427 ESNIDLDEEFKENYELWLEQEVYNNEINWDVL 332
           +  ++L + FK NY +WLE+EVYN++ +WD L
Sbjct: 896 DRKVELTDYFKANYAVWLEEEVYNSQTDWDAL 927


>AE014296-640|AAF47760.1|  882|Drosophila melanogaster CG11526-PA,
           isoform A protein.
          Length = 882

 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 15/32 (46%), Positives = 24/32 (75%)
 Frame = -2

Query: 427 ESNIDLDEEFKENYELWLEQEVYNNEINWDVL 332
           +  ++L + FK NY +WLE+EVYN++ +WD L
Sbjct: 851 DRKVELTDYFKANYAVWLEEEVYNSQTDWDAL 882


>AE014296-639|AAN11560.2|  927|Drosophila melanogaster CG11526-PB,
           isoform B protein.
          Length = 927

 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 15/32 (46%), Positives = 24/32 (75%)
 Frame = -2

Query: 427 ESNIDLDEEFKENYELWLEQEVYNNEINWDVL 332
           +  ++L + FK NY +WLE+EVYN++ +WD L
Sbjct: 896 DRKVELTDYFKANYAVWLEEEVYNSQTDWDAL 927


>DQ162845-1|ABA42953.1| 1715|Drosophila melanogaster TRF2 protein.
          Length = 1715

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = -2

Query: 478 EQEIDLTPLDTDINSVLESNIDLDEE 401
           E++ D +  DTD NS  +SN+DLD +
Sbjct: 600 EEDSDSSSFDTDSNSDSDSNLDLDSD 625


>L23146-1|AAA03750.1| 1011|Drosophila melanogaster neuromusculin
           protein.
          Length = 1011

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = +3

Query: 186 NLSVIVAFSFCLSLVAITDNTESTTISQLASQTMYLP 296
           ++S+ +    CL+LV  +     TTISQ  SQ++ LP
Sbjct: 21  SISLSLVLVLCLALVDSSTAQVDTTISQQESQSVVLP 57


>AE014296-3753|ABI31268.1| 1036|Drosophila melanogaster CG8779-PB,
           isoform B protein.
          Length = 1036

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = +3

Query: 186 NLSVIVAFSFCLSLVAITDNTESTTISQLASQTMYLP 296
           ++S+ +    CL+LV  +     TTISQ  SQ++ LP
Sbjct: 24  SISLSLVLVLCLALVDSSTAQVDTTISQQESQSVVLP 60


>AE014296-3752|AAF51887.4| 1087|Drosophila melanogaster CG8779-PA,
           isoform A protein.
          Length = 1087

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = +3

Query: 186 NLSVIVAFSFCLSLVAITDNTESTTISQLASQTMYLP 296
           ++S+ +    CL+LV  +     TTISQ  SQ++ LP
Sbjct: 24  SISLSLVLVLCLALVDSSTAQVDTTISQQESQSVVLP 60


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,993,862
Number of Sequences: 53049
Number of extensions: 351766
Number of successful extensions: 892
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 872
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 892
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)