Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS302E08f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41264-1|AAA82421.1|  929|Caenorhabditis elegans Hypothetical pr...    58   4e-09
Z80215-14|CAI79138.1|  662|Caenorhabditis elegans Hypothetical p...    30   1.2  
Z80215-13|CAI79137.1|  640|Caenorhabditis elegans Hypothetical p...    30   1.2  
Z80215-12|CAB02277.1|  652|Caenorhabditis elegans Hypothetical p...    30   1.2  
Z75711-11|CAB00038.1|  755|Caenorhabditis elegans Hypothetical p...    29   2.0  
Z75710-10|CAB00029.1|  755|Caenorhabditis elegans Hypothetical p...    29   2.0  
AF098506-1|ABN43085.1|  145|Caenorhabditis elegans Hypothetical ...    29   2.0  
AF016685-6|AAG24147.1|  338|Caenorhabditis elegans Seven tm rece...    29   2.0  
AF000198-9|AAB53057.4|  684|Caenorhabditis elegans Hypothetical ...    29   2.7  
Z81119-8|CAB03340.1|  504|Caenorhabditis elegans Hypothetical pr...    28   4.7  
AF039050-7|ABC71842.1|  516|Caenorhabditis elegans Cytochrome p4...    28   4.7  
AF039050-6|AAC47939.2|  499|Caenorhabditis elegans Cytochrome p4...    28   4.7  
Z75536-2|CAA99830.2| 4171|Caenorhabditis elegans Hypothetical pr...    27   6.2  

>U41264-1|AAA82421.1|  929|Caenorhabditis elegans Hypothetical protein
            F10E7.8 protein.
          Length = 929

 Score = 58.0 bits (134), Expect = 4e-09
 Identities = 25/46 (54%), Positives = 33/46 (71%)
 Frame = -2

Query: 466  DLTPLDTDINSVLESNIDLDEEFKENYELWLEQEVYNNEINWDVLL 329
            D  P+DT  +SVL +N+ L   FK++YE WLEQEV+N  I+WD LL
Sbjct: 874  DFEPVDTCAHSVLGANLKLGRHFKKDYEKWLEQEVFNASIDWDKLL 919


>Z80215-14|CAI79138.1|  662|Caenorhabditis elegans Hypothetical
           protein C36B1.12c protein.
          Length = 662

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 14/54 (25%), Positives = 25/54 (46%)
 Frame = +2

Query: 317 TLCRXXXXXXXXXXXXFLFEPQFIILFELFI*VYVTLQDTVYVCVQGSQINFLF 478
           T+C             + F P  +I F +F+ ++ T   ++Y C++G   NF F
Sbjct: 294 TICLMMTTLCGVLLLGYFFRPVLVIFFNIFLVIFGTC--SLYGCIRGFLSNFKF 345


>Z80215-13|CAI79137.1|  640|Caenorhabditis elegans Hypothetical
           protein C36B1.12b protein.
          Length = 640

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 14/54 (25%), Positives = 25/54 (46%)
 Frame = +2

Query: 317 TLCRXXXXXXXXXXXXFLFEPQFIILFELFI*VYVTLQDTVYVCVQGSQINFLF 478
           T+C             + F P  +I F +F+ ++ T   ++Y C++G   NF F
Sbjct: 294 TICLMMTTLCGVLLLGYFFRPVLVIFFNIFLVIFGTC--SLYGCIRGFLSNFKF 345


>Z80215-12|CAB02277.1|  652|Caenorhabditis elegans Hypothetical
           protein C36B1.12a protein.
          Length = 652

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 14/54 (25%), Positives = 25/54 (46%)
 Frame = +2

Query: 317 TLCRXXXXXXXXXXXXFLFEPQFIILFELFI*VYVTLQDTVYVCVQGSQINFLF 478
           T+C             + F P  +I F +F+ ++ T   ++Y C++G   NF F
Sbjct: 294 TICLMMTTLCGVLLLGYFFRPVLVIFFNIFLVIFGTC--SLYGCIRGFLSNFKF 345


>Z75711-11|CAB00038.1|  755|Caenorhabditis elegans Hypothetical
           protein D1081.8 protein.
          Length = 755

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 12/33 (36%), Positives = 22/33 (66%)
 Frame = +3

Query: 234 ITDNTESTTISQLASQTMYLPLLAKKIKLYVDN 332
           +TD TES   + +A++TM  P+L   ++L ++N
Sbjct: 328 LTDYTESARANAVAARTMRTPMLKDTVQLELEN 360


>Z75710-10|CAB00029.1|  755|Caenorhabditis elegans Hypothetical
           protein D1081.8 protein.
          Length = 755

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 12/33 (36%), Positives = 22/33 (66%)
 Frame = +3

Query: 234 ITDNTESTTISQLASQTMYLPLLAKKIKLYVDN 332
           +TD TES   + +A++TM  P+L   ++L ++N
Sbjct: 328 LTDYTESARANAVAARTMRTPMLKDTVQLELEN 360


>AF098506-1|ABN43085.1|  145|Caenorhabditis elegans Hypothetical
           protein H29C22.1 protein.
          Length = 145

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = -2

Query: 430 LESNIDLDEEFKENYEL-WLEQEVYNNEINWDVLLST 323
           LE+N D+ E F EN+E    ++E YN E   D ++ T
Sbjct: 39  LENNDDVPELFHENFEFKTCKEERYNKEQTVDYIIDT 75


>AF016685-6|AAG24147.1|  338|Caenorhabditis elegans Seven tm
           receptor protein 84 protein.
          Length = 338

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = -2

Query: 412 LDEEFKENYELWLEQEVYNNEI 347
           L EEFK NY L ++Q +YN  I
Sbjct: 164 LTEEFKTNYNLTMDQVLYNGPI 185


>AF000198-9|AAB53057.4|  684|Caenorhabditis elegans Hypothetical
           protein T28F2.7 protein.
          Length = 684

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 18/78 (23%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
 Frame = -2

Query: 508 FNH-RRYGTGTEQEIDLTPLDTDINSVLESNIDLDEEFKENYELWLEQEVYNNEINWDVL 332
           +NH  R+   T  E  +  +DT +  V+  + +++    E  ++  + +VY++  ++   
Sbjct: 402 YNHLNRFNDCTPYETFIC-MDTKMKKVVNQSFNIEMPTCEECKVECKSQVYHSFNSYGKG 460

Query: 331 LST*SLIFLANRGKYMVW 278
           LS  +L++L  +GK   W
Sbjct: 461 LSRGALMWLTKQGKQETW 478


>Z81119-8|CAB03340.1|  504|Caenorhabditis elegans Hypothetical
           protein T10H4.10 protein.
          Length = 504

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
 Frame = -2

Query: 463 LTPLDTDINSVLESNIDLDEEFKENYELWL-EQEVYNNEINW 341
           L  +  D N  LE+   L+    + Y+LWL  QE  +  +NW
Sbjct: 282 LLKMQKDKNEGLETTFTLENLAVDMYDLWLGGQETTSTTLNW 323


>AF039050-7|ABC71842.1|  516|Caenorhabditis elegans Cytochrome p450
           family protein34A9, isoform b protein.
          Length = 516

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = -2

Query: 463 LTPLDTDINSVLESNIDLDEEFKENYELWLE-QEVYNNEINW 341
           L  ++ D N  ++S  DL+    + Y+LWL  QE  +  + W
Sbjct: 278 LIKMEKDKNEGIQSTFDLETLAVDLYDLWLAGQETTSTTLTW 319


>AF039050-6|AAC47939.2|  499|Caenorhabditis elegans Cytochrome p450
           family protein34A9, isoform a protein.
          Length = 499

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = -2

Query: 463 LTPLDTDINSVLESNIDLDEEFKENYELWLE-QEVYNNEINW 341
           L  ++ D N  ++S  DL+    + Y+LWL  QE  +  + W
Sbjct: 278 LIKMEKDKNEGIQSTFDLETLAVDLYDLWLAGQETTSTTLTW 319


>Z75536-2|CAA99830.2| 4171|Caenorhabditis elegans Hypothetical protein
            F18C12.1 protein.
          Length = 4171

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 9/24 (37%), Positives = 18/24 (75%)
 Frame = -2

Query: 415  DLDEEFKENYELWLEQEVYNNEIN 344
            ++DE+ K+  + WL  E++NNE++
Sbjct: 1080 EIDEDIKQFEDNWLIYEMFNNELD 1103


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,682,419
Number of Sequences: 27780
Number of extensions: 193666
Number of successful extensions: 527
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 519
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 527
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)