Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS302E08f
         (521 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g14990.1 68418.m01758 hypothetical protein                          28   4.4  
At2g26330.1 68415.m03159 leucine-rich repeat protein kinase, put...    27   5.8  

>At5g14990.1 68418.m01758 hypothetical protein
          Length = 666

 Score = 27.9 bits (59), Expect = 4.4
 Identities = 14/61 (22%), Positives = 33/61 (54%)
 Frame = -2

Query: 514 DRFNHRRYGTGTEQEIDLTPLDTDINSVLESNIDLDEEFKENYELWLEQEVYNNEINWDV 335
           D   + R     E+EI    +++++   ++   +L+ E  ++YE+ LE E +  E++W +
Sbjct: 459 DEITNNRKAEEEEEEIKSEKIESEVKC-MDCLENLNRE--KDYEILLEDEEFRQELSWII 515

Query: 334 L 332
           +
Sbjct: 516 V 516


>At2g26330.1 68415.m03159 leucine-rich repeat protein kinase,
           putative (ERECTA) identical to uncharacterized receptor
           protein kinase ERECTA [Arabidopsis thaliana]
           gi|1389566|dbj|BAA11869; contains Pfam domains PF00560:
           Leucine Rich Repeat and PF00069: Protein kinase domain
          Length = 976

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +3

Query: 195 VIVAFSFCLSLVAITDNTESTTISQL 272
           V++ F FCLSLVA   + E  T+ ++
Sbjct: 8   VLLGFLFCLSLVATVTSEEGATLLEI 33


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,809,087
Number of Sequences: 28952
Number of extensions: 170087
Number of successful extensions: 441
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 438
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 440
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 957410176
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)