Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS302E06f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    24   0.71 
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    23   2.2  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   2.9  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    21   6.6  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    21   6.6  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    21   8.7  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   8.7  
AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A prot...    21   8.7  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    21   8.7  

>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 24.2 bits (50), Expect = 0.71
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = +1

Query: 364 EKSAVPTPPSEIRWRKRRREVT 429
           +KSA P+PP ++   +R+  +T
Sbjct: 224 KKSATPSPPPQLEVNERKENLT 245


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = -1

Query: 365 SLPFSSISRHLNTHSSLSHIVIHTLHPC 282
           S PF S+ + LN  +       HTL  C
Sbjct: 239 SSPFESLKKSLNFRTPSCLETFHTLEKC 266


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = +1

Query: 127  GVLTIIKIIENNSHTLSVVWSCDA*REDACD*LG 228
            G  T I++  N+ H+L V W   A  E   D LG
Sbjct: 997  GPPTSIRVETNDQHSLVVYWKPPAREEWNGDILG 1030


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +3

Query: 63  NVRYVFFIYV*LCKHMTSRFGWS 131
           N   V F+ + L +H  SR+ W+
Sbjct: 137 NTLTVVFMLIALGEHWLSRYSWA 159


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +3

Query: 63  NVRYVFFIYV*LCKHMTSRFGWS 131
           N   V F+ + L +H  SR+ W+
Sbjct: 137 NTLTVVFMLIALGEHWLSRYSWA 159


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -1

Query: 74  IPYIPRFDTVTVPPWYS 24
           IP IPR+  +++  W S
Sbjct: 127 IPDIPRYPWMSITDWMS 143


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -1

Query: 74  IPYIPRFDTVTVPPWYS 24
           IP IPR+  +++  W S
Sbjct: 186 IPDIPRYPWMSITDWMS 202


>AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A
           protein.
          Length = 150

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -1

Query: 74  IPYIPRFDTVTVPPWYS 24
           IP IPR+  +++  W S
Sbjct: 127 IPDIPRYPWMSITDWMS 143


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -1

Query: 74  IPYIPRFDTVTVPPWYS 24
           IP IPR+  +++  W S
Sbjct: 186 IPDIPRYPWMSITDWMS 202


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,336
Number of Sequences: 336
Number of extensions: 2463
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)