Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS302E06f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z77659-4|CAB01163.1|  507|Caenorhabditis elegans Hypothetical pr...    48   5e-06
Z81044-2|CAB02813.1|  337|Caenorhabditis elegans Hypothetical pr...    42   4e-04
AF047653-6|AAC04462.2|  463|Caenorhabditis elegans Hypothetical ...    33   0.16 
Z70754-6|CAA94776.1|  242|Caenorhabditis elegans Hypothetical pr...    29   1.5  
AC006615-3|AAK68232.1| 1148|Caenorhabditis elegans Hypothetical ...    27   8.1  
AC006615-2|AAK68231.1| 1121|Caenorhabditis elegans Hypothetical ...    27   8.1  

>Z77659-4|CAB01163.1|  507|Caenorhabditis elegans Hypothetical
           protein F23B12.5 protein.
          Length = 507

 Score = 47.6 bits (108), Expect = 5e-06
 Identities = 21/34 (61%), Positives = 28/34 (82%)
 Frame = +1

Query: 1   KDGKLQPQEYQGGTVTVSNLGMYGMYSLSTFSCV 102
           ++GKLQP E+QGGT TVSNLGM+G  S+S F+ +
Sbjct: 409 REGKLQPHEFQGGTFTVSNLGMFG--SVSDFTAI 440


>Z81044-2|CAB02813.1|  337|Caenorhabditis elegans Hypothetical
           protein C30H6.7 protein.
          Length = 337

 Score = 41.5 bits (93), Expect = 4e-04
 Identities = 16/34 (47%), Positives = 28/34 (82%)
 Frame = +1

Query: 1   KDGKLQPQEYQGGTVTVSNLGMYGMYSLSTFSCV 102
           ++ KL+PQ++QGG+ T+SNLGM+G  S++ F+ +
Sbjct: 225 RESKLKPQQFQGGSFTISNLGMFG--SVTNFTAI 256


>AF047653-6|AAC04462.2|  463|Caenorhabditis elegans Hypothetical
           protein W02F12.5 protein.
          Length = 463

 Score = 32.7 bits (71), Expect = 0.16
 Identities = 12/24 (50%), Positives = 19/24 (79%)
 Frame = +1

Query: 1   KDGKLQPQEYQGGTVTVSNLGMYG 72
           +DGKL  ++ +GGT T+SN G++G
Sbjct: 365 RDGKLAVEDMEGGTFTISNGGVFG 388


>Z70754-6|CAA94776.1|  242|Caenorhabditis elegans Hypothetical
           protein F58E6.6 protein.
          Length = 242

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
 Frame = -1

Query: 356 FSSISRHLNTHSSLSHIVIHTLHPCLLRSTSSPSTLH*-HFHTSPSQSHASSLYASHDHT 180
           F +I   ++   +L  + + + H C+++ T+S  +LH  HFH +  +    S ++  DH 
Sbjct: 13  FFTIIHSISATGNLQ-LTLTSSHDCVIKLTTS--SLHSEHFHLAMGKPRVVSFHSLVDHE 69

Query: 179 TLSVCELFSI 150
           TL V  +FS+
Sbjct: 70  TLQV--IFSL 77


>AC006615-3|AAK68232.1| 1148|Caenorhabditis elegans Hypothetical
           protein C36B7.5b protein.
          Length = 1148

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = +3

Query: 225 RRCMEMLVQGRGGRGRPKKTWMECVN-DDMRERGVSIEMT 341
           RR  +    GRGG  RP  T  +C N DD +ER   +E T
Sbjct: 837 RRFCDRSPIGRGGPMRPDST-CDCGNGDDSQERSCPMEQT 875


>AC006615-2|AAK68231.1| 1121|Caenorhabditis elegans Hypothetical
           protein C36B7.5a protein.
          Length = 1121

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = +3

Query: 225 RRCMEMLVQGRGGRGRPKKTWMECVN-DDMRERGVSIEMT 341
           RR  +    GRGG  RP  T  +C N DD +ER   +E T
Sbjct: 837 RRFCDRSPIGRGGPMRPDST-CDCGNGDDSQERSCPMEQT 875


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,752,326
Number of Sequences: 27780
Number of extensions: 233588
Number of successful extensions: 597
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 579
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 597
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)