Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS302E05f
         (521 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB065594-1|BAC05822.1|  301|Homo sapiens seven transmembrane hel...    29   7.5  
DQ925701-1|ABI96896.1|  600|Homo sapiens fibroblast-related prot...    29   9.9  
BC142993-1|AAI42994.1|  600|Homo sapiens kelch-like 24 (Drosophi...    29   9.9  
AY422472-1|AAR13703.1|  600|Homo sapiens DRE1 protein protein.         29   9.9  
AY102009-1|AAM52484.1|  735|Homo sapiens winged-helix transcript...    29   9.9  
AK026326-1|BAB15447.1|  403|Homo sapiens protein ( Homo sapiens ...    29   9.9  
AK000066-1|BAA90921.1|  421|Homo sapiens protein ( Homo sapiens ...    29   9.9  
AB095366-1|BAE48232.1|  735|Homo sapiens regulatory factor X4, i...    29   9.9  

>AB065594-1|BAC05822.1|  301|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 301

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = -2

Query: 466 WHLFAGLFMQSWM*LLVDGSNILLLNSHP-LSLGSLASASEFSLLVLC 326
           W LF+   +   M L+ +G  ILL+  HP L        S FSLL +C
Sbjct: 16  WMLFSIFLLMYLMILMCNGIIILLIKIHPALQTPMYFFLSNFSLLEIC 63


>DQ925701-1|ABI96896.1|  600|Homo sapiens fibroblast-related protein
           protein.
          Length = 600

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +3

Query: 357 LANDPSDNGCEFKSSMFEPSTSSYIHDCIKSPAKRC 464
           +   P DN C  K   ++P T+S++       AKRC
Sbjct: 459 IGGGPDDNTCSDKVQSYDPETNSWLLRAAIPIAKRC 494


>BC142993-1|AAI42994.1|  600|Homo sapiens kelch-like 24 (Drosophila)
           protein.
          Length = 600

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +3

Query: 357 LANDPSDNGCEFKSSMFEPSTSSYIHDCIKSPAKRC 464
           +   P DN C  K   ++P T+S++       AKRC
Sbjct: 459 IGGGPDDNTCSDKVQSYDPETNSWLLRAAIPIAKRC 494


>AY422472-1|AAR13703.1|  600|Homo sapiens DRE1 protein protein.
          Length = 600

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +3

Query: 357 LANDPSDNGCEFKSSMFEPSTSSYIHDCIKSPAKRC 464
           +   P DN C  K   ++P T+S++       AKRC
Sbjct: 459 IGGGPDDNTCSDKVQSYDPETNSWLLRAAIPIAKRC 494


>AY102009-1|AAM52484.1|  735|Homo sapiens winged-helix
          transcription factor RFX4 variant 3 protein.
          Length = 735

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 11/25 (44%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
 Frame = -1

Query: 77 PELDLVNNW-EICVKNSENKHHKSH 6
          P++D   +W E C+  SENK + SH
Sbjct: 9  PDMDSTESWIERCLNESENKRYSSH 33


>AK026326-1|BAB15447.1|  403|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ22673 fis, clone HSI10503. ).
          Length = 403

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +3

Query: 357 LANDPSDNGCEFKSSMFEPSTSSYIHDCIKSPAKRC 464
           +   P DN C  K   ++P T+S++       AKRC
Sbjct: 262 IGGGPDDNTCSDKVQSYDPETNSWLLRAAIPIAKRC 297


>AK000066-1|BAA90921.1|  421|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20059 fis, clone COL01349. ).
          Length = 421

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +3

Query: 357 LANDPSDNGCEFKSSMFEPSTSSYIHDCIKSPAKRC 464
           +   P DN C  K   ++P T+S++       AKRC
Sbjct: 343 IGGGPDDNTCSDKVQSYDPETNSWLLRAAIRIAKRC 378


>AB095366-1|BAE48232.1|  735|Homo sapiens regulatory factor X4,
          isoform d protein.
          Length = 735

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 11/25 (44%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
 Frame = -1

Query: 77 PELDLVNNW-EICVKNSENKHHKSH 6
          P++D   +W E C+  SENK + SH
Sbjct: 9  PDMDSTESWIERCLNESENKRYSSH 33


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,148,536
Number of Sequences: 237096
Number of extensions: 1334280
Number of successful extensions: 3049
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3005
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3049
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)