Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS302E05f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81530-5|CAB04309.2|  287|Caenorhabditis elegans Hypothetical pr...    29   1.5  
Z81510-3|CAB04163.1|  311|Caenorhabditis elegans Hypothetical pr...    29   2.0  
Z48006-3|CAB62803.1|  449|Caenorhabditis elegans Hypothetical pr...    29   2.7  
AF068716-1|AAC17747.1|  247|Caenorhabditis elegans Hypothetical ...    28   3.5  
Z69662-7|CAA93497.2| 1132|Caenorhabditis elegans Hypothetical pr...    28   4.7  
Z22175-2|CAA80131.2|  520|Caenorhabditis elegans Hypothetical pr...    27   8.1  
Z11115-20|CAA77460.2|  520|Caenorhabditis elegans Hypothetical p...    27   8.1  

>Z81530-5|CAB04309.2|  287|Caenorhabditis elegans Hypothetical
           protein F36D1.6 protein.
          Length = 287

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 16/42 (38%), Positives = 25/42 (59%)
 Frame = -1

Query: 404 HTAFEFASIITRVIGERIRVLTLGSVPNGHYVRTQSVFIRRS 279
           H  +EF S ++RVIG +  ++ LG+    +   T +VF RRS
Sbjct: 236 HGEYEFGSPLSRVIGRKWTIVGLGTT---YMDFTSNVFFRRS 274


>Z81510-3|CAB04163.1|  311|Caenorhabditis elegans Hypothetical
           protein F21D9.4 protein.
          Length = 311

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
 Frame = +3

Query: 111 RHMNLENLDKALHDLGMLSAITEARREYLRET-KSNYSVMRLNTRYVSNVTVGYCMKRAT 287
           R +N E L+   +DL   +    ARR+ +R   + + S  R+      N+ VGYC  R  
Sbjct: 161 REVNAEQLEA--YDL---TICPRARRKIIRPWFEQDQSYTRVAFERNQNI-VGYCTIRVI 214

Query: 288 NKNRLC 305
           N NRLC
Sbjct: 215 NLNRLC 220


>Z48006-3|CAB62803.1|  449|Caenorhabditis elegans Hypothetical
           protein F19C6.2b protein.
          Length = 449

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = -1

Query: 131 IFKIHVARLAFLKIIAFHPELDLVNNWEICVKN-SENKHHKSHN 3
           IFK+H        ++A   + D++ NW   VK+ +ENK H S +
Sbjct: 81  IFKVHTTDYEKNPLVAEAKKSDVLPNWAHSVKDFAENKLHSSES 124


>AF068716-1|AAC17747.1|  247|Caenorhabditis elegans Hypothetical
           protein F26D11.4 protein.
          Length = 247

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
 Frame = +3

Query: 240 RYVSNVTVGYCMKRATNKNR-LCPYVVPIRHRTKSENSDALANDPSDNGCEFKSSMFEPS 416
           +Y  N   G CM    +KN  L PYV+   HR +  N   +     D  C+  ++ FE +
Sbjct: 95  KYEENEKDGICM---LHKNLDLHPYVLLSGHRNRECNQPIIQFASLDKKCKNGTTAFEIA 151

Query: 417 TSSYIHDCIKS 449
             S  H  ++S
Sbjct: 152 DGSSNHSYLQS 162


>Z69662-7|CAA93497.2| 1132|Caenorhabditis elegans Hypothetical
           protein F56D5.9 protein.
          Length = 1132

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 30/123 (24%), Positives = 57/123 (46%), Gaps = 2/123 (1%)
 Frame = +3

Query: 81  KCNDFEKSKSRHMNLENLDKALHD-LGMLSAITEARREYLRETKSNYSVMRLNTRYVSNV 257
           K  D+EK K+  ++++NL   LH  +  +  I + + + L E K+    +R+  + +   
Sbjct: 357 KSFDYEKFKNIFIHMDNLATELHKYIRRVRKIIKQKDKTLDELKN----IRVKVKEIMKS 412

Query: 258 TVGYCMKRATN-KNRLCPYVVPIRHRTKSENSDALANDPSDNGCEFKSSMFEPSTSSYIH 434
             G   +  +N  N++ P       R  SEN   L +D   +G EF  S+    +  Y++
Sbjct: 413 DSGNWRQIQSNLYNKISPNDTKSIKR-MSENVTQLISD--YDGSEFVKSIINAPSLDYLN 469

Query: 435 DCI 443
           D +
Sbjct: 470 DVL 472


>Z22175-2|CAA80131.2|  520|Caenorhabditis elegans Hypothetical
           protein ZK637.1 protein.
          Length = 520

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 28/93 (30%), Positives = 39/93 (41%), Gaps = 6/93 (6%)
 Frame = -2

Query: 346 FSLLVLCLMGTT*GHSLFLFVALFMQYPTVTFDT*RVFNRITL*LDFVSRKYSRLASVIA 167
           FS LV C+MG   G S   +V LF +  T  F    V   +TL  +F+         V+ 
Sbjct: 154 FSTLVACIMGVISGMSPHFYVLLFFRGLT-GFGIGGVPQSVTLYAEFLPTAQRAKCVVLI 212

Query: 166 LS------MPKSCKALSKFSRFMWRDLLFSKSL 86
            S      + ++  A      F WR L+F  SL
Sbjct: 213 ESFWAIGAVFEALLAYFVMESFGWRALMFLSSL 245


>Z11115-20|CAA77460.2|  520|Caenorhabditis elegans Hypothetical
           protein ZK637.1 protein.
          Length = 520

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 28/93 (30%), Positives = 39/93 (41%), Gaps = 6/93 (6%)
 Frame = -2

Query: 346 FSLLVLCLMGTT*GHSLFLFVALFMQYPTVTFDT*RVFNRITL*LDFVSRKYSRLASVIA 167
           FS LV C+MG   G S   +V LF +  T  F    V   +TL  +F+         V+ 
Sbjct: 154 FSTLVACIMGVISGMSPHFYVLLFFRGLT-GFGIGGVPQSVTLYAEFLPTAQRAKCVVLI 212

Query: 166 LS------MPKSCKALSKFSRFMWRDLLFSKSL 86
            S      + ++  A      F WR L+F  SL
Sbjct: 213 ESFWAIGAVFEALLAYFVMESFGWRALMFLSSL 245


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,137,302
Number of Sequences: 27780
Number of extensions: 224739
Number of successful extensions: 602
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 586
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 602
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)