Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS302D12f
(521 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 207 4e-54
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 207 5e-54
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 207 5e-54
SB_56| Best HMM Match : Actin (HMM E-Value=0) 207 5e-54
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 206 6e-54
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 205 2e-53
SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07) 178 3e-45
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 73 1e-13
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 63 1e-10
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 3e-08
SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 2e-07
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 38 0.004
SB_54| Best HMM Match : Actin (HMM E-Value=0) 34 0.062
SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 30 1.3
SB_5589| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_50207| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_9926| Best HMM Match : DPPIV_N (HMM E-Value=0) 28 4.1
SB_36169| Best HMM Match : DUF676 (HMM E-Value=0) 28 5.4
SB_20112| Best HMM Match : EGF (HMM E-Value=0) 27 7.1
SB_22697| Best HMM Match : Hirudin (HMM E-Value=3.2) 27 7.1
SB_41148| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_39925| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_12780| Best HMM Match : SAC3_GANP (HMM E-Value=3.7e-07) 27 9.4
SB_35821| Best HMM Match : TUDOR (HMM E-Value=0) 27 9.4
SB_27191| Best HMM Match : Lysis_S (HMM E-Value=5.6) 27 9.4
SB_26480| Best HMM Match : EGF (HMM E-Value=0) 27 9.4
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 207 bits (506), Expect = 4e-54
Identities = 95/99 (95%), Positives = 99/99 (100%)
Frame = -2
Query: 520 TTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERK 341
TTYNSIMKCDVDIRKDLYANTV+SGGTTMYPG+ADRMQKEI+ALAPSTMKIKIIAPPERK
Sbjct: 251 TTYNSIMKCDVDIRKDLYANTVMSGGTTMYPGLADRMQKEISALAPSTMKIKIIAPPERK 310
Query: 340 YSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 224
YSVWIGGSILASLSTFQQMWISKQEYDESGP+IVHRKCF
Sbjct: 311 YSVWIGGSILASLSTFQQMWISKQEYDESGPAIVHRKCF 349
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 207 bits (505), Expect = 5e-54
Identities = 96/99 (96%), Positives = 98/99 (98%)
Frame = -2
Query: 520 TTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERK 341
TTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI+ALAP TMKIKIIAPPERK
Sbjct: 240 TTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEISALAPPTMKIKIIAPPERK 299
Query: 340 YSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 224
YSVWIGGSILASLSTFQQMWISKQEYDESGP+IVHRKCF
Sbjct: 300 YSVWIGGSILASLSTFQQMWISKQEYDESGPAIVHRKCF 338
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 207 bits (505), Expect = 5e-54
Identities = 96/99 (96%), Positives = 98/99 (98%)
Frame = -2
Query: 520 TTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERK 341
TTYNSIMKCDVDIRKDLYANTVLSGG+TMYPGIADRMQKEIT+LAP TMKIKIIAPPERK
Sbjct: 278 TTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEITSLAPPTMKIKIIAPPERK 337
Query: 340 YSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 224
YSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 338 YSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 207 bits (505), Expect = 5e-54
Identities = 96/99 (96%), Positives = 98/99 (98%)
Frame = -2
Query: 520 TTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERK 341
TTYNSIMKCDVDIRKDLYANTVLSGG+TMYPGIADRMQKEIT+LAP TMKIKIIAPPERK
Sbjct: 277 TTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEITSLAPPTMKIKIIAPPERK 336
Query: 340 YSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 224
YSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 337 YSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 206 bits (504), Expect = 6e-54
Identities = 96/99 (96%), Positives = 98/99 (98%)
Frame = -2
Query: 520 TTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERK 341
TTYNSIMKCDVDIRKDLYANTVLSGG+TMYPGIADRMQKEI+ALAP TMKIKIIAPPERK
Sbjct: 278 TTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEISALAPPTMKIKIIAPPERK 337
Query: 340 YSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 224
YSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 338 YSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 205 bits (500), Expect = 2e-53
Identities = 95/99 (95%), Positives = 98/99 (98%)
Frame = -2
Query: 520 TTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERK 341
TTYNSIMKCDVDIRKDLYANTVLSGG+TM+PGIADRMQKEI+ALAP TMKIKIIAPPERK
Sbjct: 277 TTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEISALAPPTMKIKIIAPPERK 336
Query: 340 YSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 224
YSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 337 YSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
>SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07)
Length = 149
Score = 178 bits (433), Expect = 3e-45
Identities = 80/97 (82%), Positives = 89/97 (91%)
Frame = -2
Query: 514 YNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYS 335
YN IMKCDVDIRKDLY+N VLSGG+TM+PGIADRMQKEI LA ++MK+K+IAPPERKYS
Sbjct: 53 YNCIMKCDVDIRKDLYSNCVLSGGSTMFPGIADRMQKEIAMLANASMKVKVIAPPERKYS 112
Query: 334 VWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 224
VWIGGSILASLSTFQQMWI+K+EY E GP IVHRKCF
Sbjct: 113 VWIGGSILASLSTFQQMWIAKEEYHEYGPPIVHRKCF 149
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 72.9 bits (171), Expect = 1e-13
Identities = 41/116 (35%), Positives = 62/116 (53%), Gaps = 16/116 (13%)
Frame = -2
Query: 511 NSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITA----------------LAPS 380
N I C +D+R+ LY N VLSGG+TM+ R+Q++I + P
Sbjct: 229 NVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDIKRTVDARLKMSETLSGGRIKPK 288
Query: 379 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF*THR 212
++ ++I+ ++Y+VW GGS+LAS F + +K +YDE GPSI F HR
Sbjct: 289 PIETQVISHHMQRYAVWFGGSMLASTPEFYSVCHTKADYDEHGPSICRHNPF-LHR 343
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 63.3 bits (147), Expect = 1e-10
Identities = 27/72 (37%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Frame = -2
Query: 508 SIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKII---APPERKY 338
S+ D+DIR L+ + +++GG T+ G +R+ +E+ + P +M++K+I + E+++
Sbjct: 159 SVGMTDIDIRAGLFNSVIVTGGNTLLQGFVERLNRELVSKTPPSMRLKLISNNSSVEKRF 218
Query: 337 SVWIGGSILASL 302
+ WIGGSILASL
Sbjct: 219 NPWIGGSILASL 230
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 55.2 bits (127), Expect = 3e-08
Identities = 39/117 (33%), Positives = 60/117 (51%), Gaps = 29/117 (24%)
Frame = -2
Query: 514 YNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITAL------------------ 389
+N+I D+D R + Y + VLSGG+TMYPG+ R+++EI L
Sbjct: 283 FNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLEREIKQLYLERVLKGDTSKLSSGMG 342
Query: 388 ---APST-----MKIKI-IAPP-ERKYSVWIGGSILAS-LSTFQQMWISKQEYDESG 251
P T K KI I P RK+ V++GG++LA + W++++EY+E G
Sbjct: 343 MEQIPLTADYLLQKFKIRIEDPPRRKHMVFMGGAVLADIMKDKDSFWMTRKEYEEKG 399
>SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 52.4 bits (120), Expect = 2e-07
Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Frame = -2
Query: 511 NSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPS--------TMKIKIIA 356
+S++ C +D RK L N VL GGT M PG R+ +EI L S +K+
Sbjct: 64 DSLLLCPIDTRKTLAENIVLIGGTAMTPGFKHRLMQEIYLLLQSPKYKDKLFIKTVKMHQ 123
Query: 355 PP-ERKYSVWIGGSILASLSTFQQMWISKQEYDE 257
PP + W+GG+I SL +++ Y +
Sbjct: 124 PPVNANITAWLGGAIFGSLEVLADRSTTRERYQQ 157
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 38.3 bits (85), Expect = 0.004
Identities = 15/28 (53%), Positives = 23/28 (82%)
Frame = -2
Query: 508 SIMKCDVDIRKDLYANTVLSGGTTMYPG 425
+I K D+D+R+ LY+N VLSGG+T++ G
Sbjct: 264 AIQKSDLDLRRVLYSNIVLSGGSTLFKG 291
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 34.3 bits (75), Expect = 0.062
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = -2
Query: 514 YNSIMKCDVDIRKDLYANTVLSG 446
+ SI KCD+D+R +L+ N VLSG
Sbjct: 2324 FKSIKKCDIDLRAELFHNIVLSG 2346
>SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 1973
Score = 29.9 bits (64), Expect = 1.3
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +3
Query: 315 IDPPIHTEYFLSGGAMILIFIVDGARAVISFCIRSAIPGYMV-VPPD-NTVLAYKSLRMS 488
+DPP+ +Y L+GG ++ + FCI G++V PP+ N+ + R++
Sbjct: 758 LDPPLENKYNLNGGQQVIQSTLQIQSLFFPFCI---FQGFVVPTPPECNSAIVLPDARIT 814
Query: 489 TS 494
S
Sbjct: 815 AS 816
>SB_5589| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 583
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -3
Query: 342 STPYGSVDRSSPPSLPSNKCGSRNKSTTSLAPPLYTGSAS 223
STP +V PP PSN+ + +K S +P T S S
Sbjct: 217 STPQATVQTPPPPPEPSNEPSTSSKPKASPSPSSITTSTS 256
>SB_50207| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 318
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/37 (32%), Positives = 15/37 (40%)
Frame = -3
Query: 300 LPSNKCGSRNKSTTSLAPPLYTGSASKRTARRCLQQP 190
L C SR K P Y G RT ++C +P
Sbjct: 118 LVKRTCNSRKKKKPEKRPSSYNGDTDYRTRKQCRYEP 154
>SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 205
Score = 28.3 bits (60), Expect = 4.1
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -2
Query: 463 NTVLSGGTTMYPGIADRMQKEITALAP 383
N ++GG TMY R+++E+ A+ P
Sbjct: 132 NVFVTGGNTMYNNFMARLERELLAIRP 158
>SB_9926| Best HMM Match : DPPIV_N (HMM E-Value=0)
Length = 1066
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = -3
Query: 297 PSNKCGSRNKSTTSLAPPLYTGSASK--RTARRCLQQPAAGC 178
P N+ G++ + +L P++TGS + RT + P+A C
Sbjct: 879 PGNQAGNKTRPLRALRSPIHTGSTLEVDRTRQGTRPDPSARC 920
>SB_36169| Best HMM Match : DUF676 (HMM E-Value=0)
Length = 2442
Score = 27.9 bits (59), Expect = 5.4
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -3
Query: 324 VDRSSPPSLPSNKCGSRNKSTTSLAPPLYTGSA-SKRTA 211
VD+S P SLP+ K G + S P GS+ SK TA
Sbjct: 1939 VDKSEPGSLPTVKFGVTTTADASSMPKFQFGSSGSKDTA 1977
>SB_20112| Best HMM Match : EGF (HMM E-Value=0)
Length = 2112
Score = 27.5 bits (58), Expect = 7.1
Identities = 19/61 (31%), Positives = 23/61 (37%), Gaps = 3/61 (4%)
Frame = -3
Query: 315 SSPPSLPSNKCGSRNKSTTSLAPPLYTGSASKRTARRCLQQP---AAGCSIQACNLR*FN 145
SS P C R S + P YTGS + RC P A C +L F+
Sbjct: 684 SSDPCQHGGTCSDRIGSYSCYCRPGYTGSNCQHPLDRCANDPCRNGATCRRTGEDLSDFH 743
Query: 144 C 142
C
Sbjct: 744 C 744
>SB_22697| Best HMM Match : Hirudin (HMM E-Value=3.2)
Length = 306
Score = 27.5 bits (58), Expect = 7.1
Identities = 20/64 (31%), Positives = 26/64 (40%), Gaps = 1/64 (1%)
Frame = -1
Query: 506 HHEVRRGHP*GLVRQHRIVRWYHHVPWNRRPYAKGNHSSRPIDNED*DHCS-SREEVLRM 330
++EV G+P H + YH VP A G H P + H S S VLR
Sbjct: 205 YYEVPHGYPAAPHGYHEVPHGYHAVPHGYYEVAHGYHEV-PHGYHEVPHGSRSASWVLRS 263
Query: 329 DRWI 318
W+
Sbjct: 264 GSWV 267
>SB_41148| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 583
Score = 27.1 bits (57), Expect = 9.4
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -3
Query: 270 KSTTSLAPPLYTGSASKRTARRCLQQP 190
K+T P++T S K+T R C++ P
Sbjct: 18 KNTLRFIMPVFTRSGRKKTNRTCIEDP 44
>SB_39925| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 143
Score = 27.1 bits (57), Expect = 9.4
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = -3
Query: 330 GSVDRSSPPSLPSNKCGSRNKSTTSLAP 247
G+ S+P ++P + + N STTSL+P
Sbjct: 16 GTTRPSAPATIPHSTTNTDNSSTTSLSP 43
>SB_12780| Best HMM Match : SAC3_GANP (HMM E-Value=3.7e-07)
Length = 436
Score = 27.1 bits (57), Expect = 9.4
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = -3
Query: 330 GSVDRSSPPSLPSNKCGSRNKSTTSLAP 247
G+ S+P ++P + + N STTSL+P
Sbjct: 124 GTTRPSAPATIPHSTTNTDNSSTTSLSP 151
>SB_35821| Best HMM Match : TUDOR (HMM E-Value=0)
Length = 754
Score = 27.1 bits (57), Expect = 9.4
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -3
Query: 342 STPYGSVDRSSPPSLPSNKCGSRNKSTTSLAPPLYTG 232
S YG +S+P S+ +NK R + PPL +G
Sbjct: 571 SAGYGKEAKSAPVSIAANKPFIRPSQDQQVMPPLISG 607
>SB_27191| Best HMM Match : Lysis_S (HMM E-Value=5.6)
Length = 181
Score = 27.1 bits (57), Expect = 9.4
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = -2
Query: 367 KIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVH 236
K++ + KY + I G+ L+ F ISK EY P+I +
Sbjct: 50 KVVVIVDYKYELDIRGTKFGELTGFDPKVISKTEYGSKLPNITN 93
>SB_26480| Best HMM Match : EGF (HMM E-Value=0)
Length = 1772
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +1
Query: 421 RFQGTWWYHRTIRCWRTSPYGCPRR 495
RF+ WY R C R YGCP R
Sbjct: 1613 RFRPQAWYSRV--CLRAEVYGCPDR 1635
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,179,363
Number of Sequences: 59808
Number of extensions: 340641
Number of successful extensions: 1058
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 977
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1055
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1172759136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -