Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS302D11f
(521 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A6YPG5 Cluster: 40S ribosomal protein S11; n=7; Eukaryo... 241 9e-63
UniRef50_P62280 Cluster: 40S ribosomal protein S11; n=65; Eukary... 239 4e-62
UniRef50_P26781 Cluster: 40S ribosomal protein S11; n=73; Eukary... 199 4e-50
UniRef50_A0BVQ1 Cluster: Chromosome undetermined scaffold_130, w... 198 5e-50
UniRef50_P79013 Cluster: 40S ribosomal protein S11; n=2; Dikarya... 196 3e-49
UniRef50_Q9U9A0 Cluster: Putative ribosomal protein S11; n=8; Eu... 187 1e-46
UniRef50_Q7XLC9 Cluster: OSJNBa0070C17.20 protein; n=11; Eukaryo... 168 8e-41
UniRef50_Q4QCN7 Cluster: Ribosomal protein s11 homolog; n=16; Eu... 161 9e-39
UniRef50_Q15GB4 Cluster: 60S ribosomal protein 11; n=1; Rhodomon... 159 3e-38
UniRef50_Q8SS53 Cluster: 40S RIBOSOMAL PROTEIN S11; n=1; Encepha... 126 3e-28
UniRef50_Q3LW88 Cluster: Ribosomal protein S11; n=1; Bigelowiell... 122 4e-27
UniRef50_Q8TW21 Cluster: 30S ribosomal protein S17P; n=24; Archa... 102 6e-21
UniRef50_Q2QAS1 Cluster: Ribosomal protein S17; n=2; environment... 101 1e-20
UniRef50_Q42068 Cluster: Ribosomal protein 40S-S11; n=1; Arabido... 99 3e-20
UniRef50_Q8PV41 Cluster: 30S ribosomal protein S17P; n=5; Methan... 96 4e-19
UniRef50_P12741 Cluster: 30S ribosomal protein S17P; n=8; Euryar... 91 1e-17
UniRef50_Q9YF81 Cluster: 30S ribosomal protein S17P; n=4; Thermo... 89 4e-17
UniRef50_A3H7C0 Cluster: Ribosomal protein S17; n=4; Thermoprote... 86 4e-16
UniRef50_Q9HIR8 Cluster: 30S ribosomal protein S17P; n=3; Euryar... 82 7e-15
UniRef50_Q74NJ4 Cluster: 30S ribosomal protein S17P; n=1; Nanoar... 79 5e-14
UniRef50_Q8ZWL3 Cluster: 30S ribosomal protein S17P; n=3; Pyroba... 78 1e-13
UniRef50_Q8TP90 Cluster: Putative 30S ribosomal protein S17P-lik... 77 2e-13
UniRef50_A1RXG3 Cluster: Ribosomal protein S17; n=1; Thermofilum... 71 1e-11
UniRef50_A0RVY2 Cluster: Ribosomal protein S17; n=2; Thermoprote... 71 1e-11
UniRef50_UPI0000D9F1CD Cluster: PREDICTED: similar to ribosomal ... 65 1e-09
UniRef50_P38519 Cluster: 30S ribosomal protein S17; n=7; Bacteri... 53 5e-06
UniRef50_Q59NQ3 Cluster: Putative uncharacterized protein; n=1; ... 49 6e-05
UniRef50_A4M9T1 Cluster: 30S ribosomal protein S17; n=2; Bacteri... 49 7e-05
UniRef50_P24321 Cluster: 30S ribosomal protein S17; n=6; Bacteri... 48 1e-04
UniRef50_A7BRH2 Cluster: Ribosomal protein S17; n=1; Beggiatoa s... 46 5e-04
UniRef50_Q7VQD9 Cluster: 30S ribosomal protein S17; n=8; Gammapr... 46 5e-04
UniRef50_O66439 Cluster: 30S ribosomal protein S17; n=1; Aquifex... 45 0.001
UniRef50_Q9PLY0 Cluster: 30S ribosomal protein S17; n=14; Campyl... 44 0.003
UniRef50_Q7WZS8 Cluster: 30S ribosomal protein S17; n=1; Candida... 43 0.004
UniRef50_Q7M8E2 Cluster: 30S ribosomal protein S17; n=11; Epsilo... 43 0.004
UniRef50_Q6KI46 Cluster: 30S ribosomal protein S17; n=3; Mycopla... 43 0.005
UniRef50_Q5FTZ2 Cluster: 30S ribosomal protein S17; n=5; Proteob... 43 0.005
UniRef50_Q3ZZL5 Cluster: 30S ribosomal protein S17; n=7; cellula... 43 0.005
UniRef50_Q6SG39 Cluster: 30S ribosomal protein S17; n=1; uncultu... 42 0.006
UniRef50_Q31IX3 Cluster: 30S ribosomal protein S17; n=1; Thiomic... 41 0.015
UniRef50_Q9Z7R6 Cluster: 30S ribosomal protein S17; n=11; Bacter... 41 0.015
UniRef50_Q67JV2 Cluster: 30S ribosomal protein S17; n=4; Bacteri... 41 0.020
UniRef50_Q7MTM2 Cluster: 30S ribosomal protein S17; n=2; cellula... 41 0.020
UniRef50_Q1ISB3 Cluster: 30S ribosomal protein S17; n=5; Bacteri... 41 0.020
UniRef50_UPI00006CFC97 Cluster: ribosomal protein S17 containing... 40 0.035
UniRef50_Q92QG1 Cluster: 30S ribosomal protein S17; n=7; Bacteri... 40 0.035
UniRef50_Q8FS73 Cluster: 30S ribosomal protein S17; n=9; Bacteri... 40 0.035
UniRef50_Q5P323 Cluster: 30S ribosomal protein S17; n=130; Bacte... 39 0.060
UniRef50_Q50309 Cluster: 30S ribosomal protein S17; n=4; Bacteri... 39 0.080
UniRef50_Q01WA1 Cluster: 30S ribosomal protein S17; n=3; Bacteri... 38 0.11
UniRef50_Q7UN11 Cluster: 30S ribosomal protein S17; n=4; Plancto... 38 0.11
UniRef50_Q601K5 Cluster: 30S ribosomal protein S17; n=4; Mycopla... 38 0.14
UniRef50_O06051 Cluster: 30S ribosomal protein S17; n=22; Bacter... 38 0.14
UniRef50_Q9UUB0 Cluster: Mitochondrial ribosomal protein subunit... 37 0.24
UniRef50_Q3YRL8 Cluster: 30S ribosomal protein S17; n=9; Rickett... 37 0.24
UniRef50_A3EVR2 Cluster: 30S ribosomal protein S17; n=1; Leptosp... 37 0.32
UniRef50_Q6CCN7 Cluster: Yarrowia lipolytica chromosome C of str... 37 0.32
UniRef50_Q7NEG1 Cluster: 30S ribosomal protein S17; n=7; cellula... 37 0.32
UniRef50_Q6C8W4 Cluster: Patatin-like phospholipase domain-conta... 37 0.32
UniRef50_Q9LHN1 Cluster: 40S ribosomal protein S17-like; n=8; Ma... 36 0.43
UniRef50_Q6MJ23 Cluster: 30S ribosomal protein S17; n=12; Bacter... 36 0.43
UniRef50_Q8ABV5 Cluster: 30S ribosomal protein S17 2; n=2; Bacte... 36 0.43
UniRef50_Q9TJN6 Cluster: 30S ribosomal protein S17, chloroplast ... 36 0.43
UniRef50_Q9PE67 Cluster: 30S ribosomal protein S17; n=52; Bacter... 36 0.56
UniRef50_O46903 Cluster: Chloroplast 30S ribosomal protein S17; ... 36 0.56
UniRef50_A3VT29 Cluster: 30S ribosomal protein S17; n=2; Alphapr... 36 0.74
UniRef50_Q2JFG7 Cluster: 30S ribosomal protein S17; n=19; Bacter... 36 0.74
UniRef50_Q6G2X4 Cluster: 30S ribosomal protein S17; n=19; Alphap... 35 0.98
UniRef50_A1UB26 Cluster: Putative uncharacterized protein; n=3; ... 35 1.3
UniRef50_A6UND3 Cluster: Heat shock protein DnaJ domain protein;... 34 1.7
UniRef50_Q62GL4 Cluster: 30S ribosomal protein S17; n=144; Bacte... 34 1.7
UniRef50_Q4FUE7 Cluster: 30S ribosomal protein S17; n=16; Gammap... 34 2.3
UniRef50_Q6A6N5 Cluster: 30S ribosomal protein S17; n=133; cellu... 34 2.3
UniRef50_Q9XD27 Cluster: 30S ribosomal protein S17; n=14; Bacter... 34 2.3
UniRef50_Q14591-2 Cluster: Isoform 2 of Q14591 ; n=2; Homo sapie... 33 3.0
UniRef50_A3TU64 Cluster: 30S ribosomal protein S17; n=3; Rhodoba... 33 3.0
UniRef50_Q9HJI5 Cluster: Putative uncharacterized protein Ta0983... 33 4.0
UniRef50_Q85FV4 Cluster: Chloroplast 30S ribosomal protein S17; ... 33 4.0
UniRef50_Q1NPK7 Cluster: 30S ribosomal protein S17; n=2; Proteob... 32 9.2
UniRef50_Q1AU38 Cluster: 30S ribosomal protein S17; n=18; Bacter... 32 9.2
>UniRef50_A6YPG5 Cluster: 40S ribosomal protein S11; n=7;
Eukaryota|Rep: 40S ribosomal protein S11 - Triatoma
infestans (Assassin bug)
Length = 194
Score = 241 bits (589), Expect = 9e-63
Identities = 115/136 (84%), Positives = 122/136 (89%)
Frame = +1
Query: 1 SFQKQPTVFLNRKKGIGVKRSRKPLRYHKDVGLGFKTPREAIEGTYIDKKCPFTGNVSIR 180
+FQKQP VFL K S+KPLR +K VGLGFKTPREAIEGTYIDKKCPFTGNVSIR
Sbjct: 51 AFQKQPHVFLASKVS-----SKKPLRRYKSVGLGFKTPREAIEGTYIDKKCPFTGNVSIR 105
Query: 181 GRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVXIGDIVTIG 360
GRILTGVVQKMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV IGD+VT+G
Sbjct: 106 GRILTGVVQKMKMQRTIVIRRDYLHYVRKYNRFEKRHKNMSVHLSPCFRDVEIGDVVTVG 165
Query: 361 ECRPLSKTVRFNVLKV 408
ECRPLSKTVRFNVLKV
Sbjct: 166 ECRPLSKTVRFNVLKV 181
Score = 69.7 bits (163), Expect = 4e-11
Identities = 30/40 (75%), Positives = 35/40 (87%)
Frame = +1
Query: 1 SFQKQPTVFLNRKKGIGVKRSRKPLRYHKDVGLGFKTPRE 120
SFQKQPT+FLNRKKG+GVK+ LRY ++VGLGFKTPRE
Sbjct: 8 SFQKQPTIFLNRKKGLGVKKKANALRYIRNVGLGFKTPRE 47
>UniRef50_P62280 Cluster: 40S ribosomal protein S11; n=65;
Eukaryota|Rep: 40S ribosomal protein S11 - Homo sapiens
(Human)
Length = 158
Score = 239 bits (584), Expect = 4e-62
Identities = 110/137 (80%), Positives = 124/137 (90%), Gaps = 1/137 (0%)
Frame = +1
Query: 1 SFQKQPTVFLNRKKGI-GVKRSRKPLRYHKDVGLGFKTPREAIEGTYIDKKCPFTGNVSI 177
++QKQPT+F N+K+ + G K RY+K++GLGFKTP+EAIEGTYIDKKCPFTGNVSI
Sbjct: 9 AYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTGNVSI 68
Query: 178 RGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVXIGDIVTI 357
RGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV IGDIVT+
Sbjct: 69 RGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTV 128
Query: 358 GECRPLSKTVRFNVLKV 408
GECRPLSKTVRFNVLKV
Sbjct: 129 GECRPLSKTVRFNVLKV 145
>UniRef50_P26781 Cluster: 40S ribosomal protein S11; n=73;
Eukaryota|Rep: 40S ribosomal protein S11 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 156
Score = 199 bits (485), Expect = 4e-50
Identities = 93/136 (68%), Positives = 113/136 (83%)
Frame = +1
Query: 1 SFQKQPTVFLNRKKGIGVKRSRKPLRYHKDVGLGFKTPREAIEGTYIDKKCPFTGNVSIR 180
+FQKQP +F N K VK S++ R++K+ GLGFKTP+ AIEG+YIDKKCPFTG VSIR
Sbjct: 12 AFQKQPHIFNNPK----VKTSKRTKRWYKNAGLGFKTPKTAIEGSYIDKKCPFTGLVSIR 67
Query: 181 GRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVXIGDIVTIG 360
G+ILTG V KM RTIVIRR YLHY+PKYNR+EKRH+N+ VH+SP FR V +GDIVT+G
Sbjct: 68 GKILTGTVVSTKMHRTIVIRRAYLHYIPKYNRYEKRHKNVPVHVSPAFR-VQVGDIVTVG 126
Query: 361 ECRPLSKTVRFNVLKV 408
+CRP+SKTVRFNV+KV
Sbjct: 127 QCRPISKTVRFNVVKV 142
>UniRef50_A0BVQ1 Cluster: Chromosome undetermined scaffold_130,
whole genome shotgun sequence; n=18; Eukaryota|Rep:
Chromosome undetermined scaffold_130, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 188
Score = 198 bits (484), Expect = 5e-50
Identities = 92/136 (67%), Positives = 109/136 (80%)
Frame = +1
Query: 1 SFQKQPTVFLNRKKGIGVKRSRKPLRYHKDVGLGFKTPREAIEGTYIDKKCPFTGNVSIR 180
+FQKQ +F N KK + K++ K +RY K+VGLGFK P++AIEG YIDKKCPFTGNVS+R
Sbjct: 38 AFQKQEGIFQNSKKLLA-KKTSKGVRYWKEVGLGFKVPKDAIEGNYIDKKCPFTGNVSVR 96
Query: 181 GRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVXIGDIVTIG 360
G IL G+V KM RTI+IRRDYLHY+ KYNR+EKRHRN+ VH+SP F V GDIV G
Sbjct: 97 GAILKGIVISTKMTRTIIIRRDYLHYVAKYNRYEKRHRNVPVHISPAFGPVKEGDIVVCG 156
Query: 361 ECRPLSKTVRFNVLKV 408
+CRPLSKTVRFNVLKV
Sbjct: 157 QCRPLSKTVRFNVLKV 172
>UniRef50_P79013 Cluster: 40S ribosomal protein S11; n=2;
Dikarya|Rep: 40S ribosomal protein S11 -
Schizosaccharomyces pombe (Fission yeast)
Length = 152
Score = 196 bits (477), Expect = 3e-49
Identities = 90/136 (66%), Positives = 109/136 (80%)
Frame = +1
Query: 1 SFQKQPTVFLNRKKGIGVKRSRKPLRYHKDVGLGFKTPREAIEGTYIDKKCPFTGNVSIR 180
+FQKQP +F N KKG G R++KDVGLGFKTP EAI G Y+DKKCPF G VSIR
Sbjct: 12 AFQKQPHIFQNAKKGAG-------RRWYKDVGLGFKTPAEAIYGEYVDKKCPFVGQVSIR 64
Query: 181 GRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVXIGDIVTIG 360
GRILTG V KM RTI+IRR+YLH++PKYNR+EKRH+N++ H+SP FR + GD+VT+G
Sbjct: 65 GRILTGTVVSTKMHRTIIIRREYLHFIPKYNRYEKRHKNLAAHVSPAFR-INEGDVVTVG 123
Query: 361 ECRPLSKTVRFNVLKV 408
+CRPLSKTVRFNVL+V
Sbjct: 124 QCRPLSKTVRFNVLRV 139
>UniRef50_Q9U9A0 Cluster: Putative ribosomal protein S11; n=8;
Eukaryota|Rep: Putative ribosomal protein S11 - Physarum
polycephalum (Slime mold)
Length = 158
Score = 187 bits (456), Expect = 1e-46
Identities = 86/136 (63%), Positives = 107/136 (78%), Gaps = 1/136 (0%)
Frame = +1
Query: 4 FQKQPTVFLNRKKGIGVKRSRKPLRYHKDVGLGFKTPREAIEGTYIDKKCPFTGNVSIRG 183
+QKQ +F+ +K+ +G+K + RY + VGLG+KTP+ A+EGT++D KCPFTGNVSIRG
Sbjct: 11 YQKQKPIFVGKKRLLGLKLKKSDTRYVRQVGLGYKTPKAALEGTFVDDKCPFTGNVSIRG 70
Query: 184 RILTGVVQKM-KMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVXIGDIVTIG 360
RIL GVV KM+RT+V+RR+YLHY+ KY R+EKRH N SVH SP DV GD VT+G
Sbjct: 71 RILRGVVVSAGKMKRTVVVRRNYLHYIQKYKRYEKRHTNFSVHCSPAL-DVKEGDTVTVG 129
Query: 361 ECRPLSKTVRFNVLKV 408
ECRPLSKTVRFNVLKV
Sbjct: 130 ECRPLSKTVRFNVLKV 145
>UniRef50_Q7XLC9 Cluster: OSJNBa0070C17.20 protein; n=11;
Eukaryota|Rep: OSJNBa0070C17.20 protein - Oryza sativa
subsp. japonica (Rice)
Length = 185
Score = 168 bits (408), Expect = 8e-41
Identities = 91/161 (56%), Positives = 106/161 (65%), Gaps = 25/161 (15%)
Frame = +1
Query: 1 SFQKQPTVFLNRKK-GIGVKRSRKPLRYHKDVGLGFKTPREAIEGTYIDKKCPFTGNVSI 177
+F KQP VFL+ KK G G K + R+ K +GLGFKTPREAIEGTYIDKKCPFTG VSI
Sbjct: 8 AFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSI 67
Query: 178 RGRILTGVVQKMKMQRTIVIRRDYLHYLPKYN------------------------RFEK 285
RGRI+ G KM RTI++RR+YLH++ KY R+EK
Sbjct: 68 RGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRQVNNYGFYLCFFSFFFPISDLGCRYEK 127
Query: 286 RHRNMSVHLSPCFRDVXIGDIVTIGECRPLSKTVRFNVLKV 408
RH N+ H+SPCFR V GD V IG+CRPLSKTVRFNVLKV
Sbjct: 128 RHSNIPAHVSPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKV 167
>UniRef50_Q4QCN7 Cluster: Ribosomal protein s11 homolog; n=16;
Eukaryota|Rep: Ribosomal protein s11 homolog -
Leishmania major
Length = 141
Score = 161 bits (391), Expect = 9e-39
Identities = 71/112 (63%), Positives = 90/112 (80%)
Frame = +1
Query: 73 LRYHKDVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYL 252
+RY K +GLGFKTP +A+ G YID+KCPFT NV IRGRIL GVV KM RTI+IRR+YL
Sbjct: 15 IRYSKKIGLGFKTPAKALNGKYIDRKCPFTSNVVIRGRILRGVVHSTKMHRTIIIRRNYL 74
Query: 253 HYLPKYNRFEKRHRNMSVHLSPCFRDVXIGDIVTIGECRPLSKTVRFNVLKV 408
H++ KY R++KRH++++VH SP F D GD V IG+CRPLSKT+R+NVL+V
Sbjct: 75 HFIKKYQRYQKRHKSLAVHCSPAF-DPKQGDEVVIGQCRPLSKTIRYNVLEV 125
>UniRef50_Q15GB4 Cluster: 60S ribosomal protein 11; n=1; Rhodomonas
salina|Rep: 60S ribosomal protein 11 - Rhodomonas salina
(Cryptomonas salina)
Length = 145
Score = 159 bits (387), Expect = 3e-38
Identities = 70/116 (60%), Positives = 89/116 (76%)
Frame = +1
Query: 61 SRKPLRYHKDVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIR 240
++K K++G+G K P EAI Y DKKCPF G +SIRGRIL G V KM+R+++IR
Sbjct: 17 TKKKKNSFKNIGMGLKAPLEAINNNYFDKKCPFRGLISIRGRILRGTVISTKMKRSVIIR 76
Query: 241 RDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVXIGDIVTIGECRPLSKTVRFNVLKV 408
RDYLH++ KY RFEKRH+N+ H SPCFR V GD+VTIG+CRPLSKT+RFNVL++
Sbjct: 77 RDYLHWISKYKRFEKRHKNIPCHCSPCFR-VQEGDLVTIGQCRPLSKTIRFNVLRI 131
>UniRef50_Q8SS53 Cluster: 40S RIBOSOMAL PROTEIN S11; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S11
- Encephalitozoon cuniculi
Length = 156
Score = 126 bits (304), Expect = 3e-28
Identities = 55/96 (57%), Positives = 70/96 (72%), Gaps = 1/96 (1%)
Frame = +1
Query: 100 GFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRF 279
GFK P A YIDKKCPFTG+V++RGR+ GVV+KMK ++TIV+ +Y+HY KY R+
Sbjct: 38 GFKAPETAYTRQYIDKKCPFTGDVNVRGRLFKGVVKKMKAEKTIVVVANYVHYSKKYKRY 97
Query: 280 EKRHRNMSVHLSPCFRD-VXIGDIVTIGECRPLSKT 384
+RH N SVH+SPCF + +GD V GE RPLSKT
Sbjct: 98 SRRHTNFSVHMSPCFEGMINVGDTVICGETRPLSKT 133
>UniRef50_Q3LW88 Cluster: Ribosomal protein S11; n=1; Bigelowiella
natans|Rep: Ribosomal protein S11 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 119
Score = 122 bits (295), Expect = 4e-27
Identities = 56/90 (62%), Positives = 70/90 (77%)
Frame = +1
Query: 139 IDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSP 318
IDKKCPF G +++RGRIL G V+K+KM+ T++IR DYL +L KYNRF KRH+N+ HLS
Sbjct: 23 IDKKCPFYGKINLRGRILRGKVRKIKMKSTVIIRIDYLKFLKKYNRFVKRHKNIPAHLSN 82
Query: 319 CFRDVXIGDIVTIGECRPLSKTVRFNVLKV 408
+GDIV I ECRP+SKTVRFNV+KV
Sbjct: 83 LL-TCKVGDIVIIAECRPISKTVRFNVIKV 111
>UniRef50_Q8TW21 Cluster: 30S ribosomal protein S17P; n=24;
Archaea|Rep: 30S ribosomal protein S17P - Methanopyrus
kandleri
Length = 118
Score = 102 bits (244), Expect = 6e-21
Identities = 51/111 (45%), Positives = 66/111 (59%)
Frame = +1
Query: 76 RYHKDVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLH 255
R KD+GLG K PR + D CPF GN+ +RG IL GVV +M +T+++ R+Y
Sbjct: 6 RMAKDIGLGVKPPRRECD----DPNCPFHGNLRVRGMILEGVVVSDRMDKTVIVEREYYR 61
Query: 256 YLPKYNRFEKRHRNMSVHLSPCFRDVXIGDIVTIGECRPLSKTVRFNVLKV 408
Y KY R+E+R + H PC D GD V I ECRPLSKT F V++V
Sbjct: 62 YDRKYERWERRRSRIPAHNPPCI-DAQEGDKVRIAECRPLSKTKSFVVIEV 111
>UniRef50_Q2QAS1 Cluster: Ribosomal protein S17; n=2; environmental
samples|Rep: Ribosomal protein S17 - uncultured marine
group II euryarchaeote HF70_59C08
Length = 111
Score = 101 bits (242), Expect = 1e-20
Identities = 44/108 (40%), Positives = 72/108 (66%), Gaps = 1/108 (0%)
Frame = +1
Query: 85 KDVGLGFKT-PREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYL 261
+D+G+ P+ +G D+ CPF G++ +RG+I+ G + K+ MQ++I++ R+++ Y+
Sbjct: 2 RDIGIELNNQPKGEWDG---DENCPFYGSLRLRGQIIEGTIAKVGMQKSIIVEREHIRYM 58
Query: 262 PKYNRFEKRHRNMSVHLSPCFRDVXIGDIVTIGECRPLSKTVRFNVLK 405
K+ R+EKR R + HL C DV +GD V I ECRPLSKT+ F V++
Sbjct: 59 QKFERYEKRTRRYAAHLPSCIGDVNVGDSVRIMECRPLSKTITFCVIE 106
>UniRef50_Q42068 Cluster: Ribosomal protein 40S-S11; n=1;
Arabidopsis thaliana|Rep: Ribosomal protein 40S-S11 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 103
Score = 99 bits (238), Expect = 3e-20
Identities = 43/75 (57%), Positives = 58/75 (77%)
Frame = +1
Query: 37 KKGIGVKRSRKPLRYHKDVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMK 216
++ + KR K R+ K++GLGFKTPREAI+G Y+DKKCPFTG VSIRGRIL + + +
Sbjct: 29 RRNLEGKRPGKVERFWKNIGLGFKTPREAIDGAYVDKKCPFTGTVSIRGRILVWYLPQCE 88
Query: 217 MQRTIVIRRDYLHYL 261
MQ TI++ RDYLH++
Sbjct: 89 MQSTIIVARDYLHFV 103
>UniRef50_Q8PV41 Cluster: 30S ribosomal protein S17P; n=5;
Methanomicrobia|Rep: 30S ribosomal protein S17P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 109
Score = 96.3 bits (229), Expect = 4e-19
Identities = 47/107 (43%), Positives = 61/107 (57%)
Frame = +1
Query: 85 KDVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLP 264
+D+GL P E + Y CPF G + +RG+IL G V KM T+VI R Y+ +
Sbjct: 3 RDIGLNIPAPSEECDDAY----CPFHGTLPVRGQILVGTVVSSKMDNTVVIERQYMKMVS 58
Query: 265 KYNRFEKRHRNMSVHLSPCFRDVXIGDIVTIGECRPLSKTVRFNVLK 405
KY R+EKR + H C +GDIVTI ECRP+SKT F V+K
Sbjct: 59 KYQRYEKRRSKIHAHNPACI-SAKVGDIVTIVECRPISKTKSFVVVK 104
>UniRef50_P12741 Cluster: 30S ribosomal protein S17P; n=8;
Euryarchaeota|Rep: 30S ribosomal protein S17P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 112
Score = 91.1 bits (216), Expect = 1e-17
Identities = 44/98 (44%), Positives = 60/98 (61%)
Frame = +1
Query: 91 VGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKY 270
+GL + P E T D+ CPF G +S+RG+ L G V M++T+V+ R+Y +PKY
Sbjct: 3 LGLNVQEPEE----TCADQNCPFHGELSVRGQTLNGEVASTDMEKTVVVEREYDVKVPKY 58
Query: 271 NRFEKRHRNMSVHLSPCFRDVXIGDIVTIGECRPLSKT 384
+RF KR + H C D+ +GD VTI ECRPLSKT
Sbjct: 59 DRFMKRRSRVPAHAPDCL-DLAVGDTVTIAECRPLSKT 95
>UniRef50_Q9YF81 Cluster: 30S ribosomal protein S17P; n=4;
Thermoprotei|Rep: 30S ribosomal protein S17P - Aeropyrum
pernix
Length = 114
Score = 89.4 bits (212), Expect = 4e-17
Identities = 41/89 (46%), Positives = 58/89 (65%)
Frame = +1
Query: 142 DKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPC 321
D CP+ G + +RG +L GVV K + +R +V++ YL+Y KYNR+E+R + + HL C
Sbjct: 24 DPNCPWHGTLRVRGVLLEGVVAKARARRMVVVQHVYLYYDKKYNRYERRSKKIHAHLPDC 83
Query: 322 FRDVXIGDIVTIGECRPLSKTVRFNVLKV 408
V GD+V IGE P+SKTV+F VL V
Sbjct: 84 I-SVKEGDVVVIGETMPISKTVKFTVLGV 111
>UniRef50_A3H7C0 Cluster: Ribosomal protein S17; n=4;
Thermoprotei|Rep: Ribosomal protein S17 - Caldivirga
maquilingensis IC-167
Length = 152
Score = 86.2 bits (204), Expect = 4e-16
Identities = 44/106 (41%), Positives = 67/106 (63%)
Frame = +1
Query: 85 KDVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLP 264
+ +G+ + P +A+ D KCP+ G+V +RG IL G V + M + +VI+ ++LHY P
Sbjct: 32 RHIGVPWLLPPKAVCN---DDKCPWHGHVKVRGTILEGRVVSVYMGQ-VVIQHEWLHYSP 87
Query: 265 KYNRFEKRHRNMSVHLSPCFRDVXIGDIVTIGECRPLSKTVRFNVL 402
KY R+ ++ RN+ HL C + V +GD V IGE RPL+K + F VL
Sbjct: 88 KYKRYIRKRRNIHAHLPSCIK-VNVGDYVVIGETRPLAKFISFVVL 132
>UniRef50_Q9HIR8 Cluster: 30S ribosomal protein S17P; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S17P -
Thermoplasma acidophilum
Length = 109
Score = 82.2 bits (194), Expect = 7e-15
Identities = 39/109 (35%), Positives = 62/109 (56%)
Frame = +1
Query: 79 YHKDVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHY 258
Y +++GL K P E D CP+ G +S+RG++LTG V M ++ V+ R+Y Y
Sbjct: 2 YTRNIGLDVKLP----ESECNDPHCPYHGKLSVRGQVLTGKVVSANMTKSAVVAREYQQY 57
Query: 259 LPKYNRFEKRHRNMSVHLSPCFRDVXIGDIVTIGECRPLSKTVRFNVLK 405
+PKY R + + VH+ C + + GD V ECR L+KT+ F +++
Sbjct: 58 IPKYERKATKIKKYHVHVPDCIK-IKPGDTVRFAECRKLAKTISFVIVE 105
>UniRef50_Q74NJ4 Cluster: 30S ribosomal protein S17P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S17P -
Nanoarchaeum equitans
Length = 113
Score = 79.4 bits (187), Expect = 5e-14
Identities = 38/87 (43%), Positives = 51/87 (58%)
Frame = +1
Query: 142 DKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPC 321
DKKCP G++ +RG G V K +T+ I ++LPKY R+E R ++ +L C
Sbjct: 16 DKKCPHHGHLKVRGFFFKGKVIKKSDNKTVKIEIIRYYWLPKYERYELRRTRITAYLPEC 75
Query: 322 FRDVXIGDIVTIGECRPLSKTVRFNVL 402
+D+ GD V IGE RPLSKT F VL
Sbjct: 76 LKDIKEGDYVLIGETRPLSKTKHFVVL 102
>UniRef50_Q8ZWL3 Cluster: 30S ribosomal protein S17P; n=3;
Pyrobaculum|Rep: 30S ribosomal protein S17P -
Pyrobaculum aerophilum
Length = 123
Score = 78.2 bits (184), Expect = 1e-13
Identities = 35/87 (40%), Positives = 57/87 (65%)
Frame = +1
Query: 142 DKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPC 321
D CP+ G++ +R ++L V+K++M + V+ ++LHY+ KYNR+E+R + M V + C
Sbjct: 20 DPLCPWHGHLKVRLKLLEVTVEKVRMHKAAVVIHEWLHYIRKYNRYERRRKRMRVRVPEC 79
Query: 322 FRDVXIGDIVTIGECRPLSKTVRFNVL 402
+V GD V I E RPLSKT+ + V+
Sbjct: 80 I-EVKPGDKVIIAETRPLSKTIAWVVI 105
>UniRef50_Q8TP90 Cluster: Putative 30S ribosomal protein S17P-like;
n=1; Methanosarcina acetivorans|Rep: Putative 30S
ribosomal protein S17P-like - Methanosarcina acetivorans
Length = 486
Score = 77.0 bits (181), Expect = 2e-13
Identities = 42/108 (38%), Positives = 63/108 (58%), Gaps = 1/108 (0%)
Frame = +1
Query: 85 KDVGL-GFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYL 261
+D+G+ G K P E D +CPF G +S+RG+IL G+V KM + IV++R +
Sbjct: 2 RDIGINGIKLPTEDCN----DPECPFHGKLSVRGQILKGIVISDKMTKNIVMKRYREKWS 57
Query: 262 PKYNRFEKRHRNMSVHLSPCFRDVXIGDIVTIGECRPLSKTVRFNVLK 405
KY R ++ + + PC + IGDI+TI ECRPL+K F V++
Sbjct: 58 YKYQRKQRVSSKIHAYSPPCM-EAKIGDIITIAECRPLNKGSSFVVIE 104
>UniRef50_A1RXG3 Cluster: Ribosomal protein S17; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein S17 - Thermofilum
pendens (strain Hrk 5)
Length = 111
Score = 71.3 bits (167), Expect = 1e-11
Identities = 35/87 (40%), Positives = 51/87 (58%)
Frame = +1
Query: 142 DKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPC 321
D CP+ G + +RG++L V+K+KM V +YL+Y KY R+E R + V + PC
Sbjct: 21 DPLCPWHGELPVRGQVLRLRVEKVKMHNVAVAVHEYLYYNEKYKRYEVRRKKKHVRVPPC 80
Query: 322 FRDVXIGDIVTIGECRPLSKTVRFNVL 402
V GD V + E RPL+K+V F V+
Sbjct: 81 I-PVKPGDEVIVAETRPLAKSVSFVVI 106
>UniRef50_A0RVY2 Cluster: Ribosomal protein S17; n=2;
Thermoprotei|Rep: Ribosomal protein S17 - Cenarchaeum
symbiosum
Length = 109
Score = 71.3 bits (167), Expect = 1e-11
Identities = 39/109 (35%), Positives = 61/109 (55%), Gaps = 1/109 (0%)
Frame = +1
Query: 85 KDVGLGFKTP-REAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYL 261
+++GL P REA +G DK PF G + IRG++ G + K + T+VI ++ Y
Sbjct: 3 REIGLPVPAPSREAADG---DKNNPFNGTLPIRGKLFEGTIVSAKARSTVVIEKESPVYF 59
Query: 262 PKYNRFEKRHRNMSVHLSPCFRDVXIGDIVTIGECRPLSKTVRFNVLKV 408
K+ R+ + + H+ P DV GD V ECRP++K+V F V++V
Sbjct: 60 TKFKRYARGRSRIHAHV-PSNIDVREGDRVLAAECRPVAKSVSFVVVEV 107
>UniRef50_UPI0000D9F1CD Cluster: PREDICTED: similar to ribosomal
protein S11; n=1; Macaca mulatta|Rep: PREDICTED: similar
to ribosomal protein S11 - Macaca mulatta
Length = 84
Score = 64.9 bits (151), Expect = 1e-09
Identities = 28/38 (73%), Positives = 32/38 (84%)
Frame = +1
Query: 295 NMSVHLSPCFRDVXIGDIVTIGECRPLSKTVRFNVLKV 408
NMS+H S CFRDV IG IVT+GEC+PLSKTVRF + KV
Sbjct: 34 NMSIHFSTCFRDVHIGHIVTVGECQPLSKTVRFIMFKV 71
>UniRef50_P38519 Cluster: 30S ribosomal protein S17; n=7;
Bacteria|Rep: 30S ribosomal protein S17 - Thermotoga
maritima
Length = 107
Score = 52.8 bits (121), Expect = 5e-06
Identities = 28/73 (38%), Positives = 42/73 (57%)
Frame = +1
Query: 190 LTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVXIGDIVTIGECR 369
LTG+V KM +T+V+ + L P Y ++ KR + H + IGD+V I E R
Sbjct: 6 LTGIVVSDKMDKTVVVAVEKLVQHPLYKKYVKRTKKYHAHDER--NECKIGDVVEIEETR 63
Query: 370 PLSKTVRFNVLKV 408
PLSKT R+ V+++
Sbjct: 64 PLSKTKRWRVVRI 76
>UniRef50_Q59NQ3 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 162
Score = 49.2 bits (112), Expect = 6e-05
Identities = 34/103 (33%), Positives = 47/103 (45%)
Frame = -3
Query: 408 NFQNIESNCFGQRSAFADRYNITNXHVPEARRQMYGHVPVPFLEPIVFG*VVKVIXXXXX 229
NFQNIES+ F S + NIT + E+ R + ++ V F ++F V++VI
Sbjct: 61 NFQNIESDSFRNWSTLTNGDNITFFN-SESWRDVGSNILVSFFVSVIFWNVMQVISSDND 119
Query: 228 XXXXXXXXXXAGEDAAADRNVASEGTLLVNVGTLNRLTGSLET 100
G+D +D N SE T VNV T N ET
Sbjct: 120 GTVHFGGNNSTGQDFTSDGNSTSEWTFFVNVRTFNGSFWGFET 162
>UniRef50_A4M9T1 Cluster: 30S ribosomal protein S17; n=2;
Bacteria|Rep: 30S ribosomal protein S17 - Petrotoga
mobilis SJ95
Length = 110
Score = 48.8 bits (111), Expect = 7e-05
Identities = 31/74 (41%), Positives = 40/74 (54%)
Frame = +1
Query: 184 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVXIGDIVTIGE 363
+I+TG V M +TI + D L PKY++F ++ R H + IGDIV I E
Sbjct: 4 KIITGKVVSNAMDKTITVETDRLTKHPKYHKFVRKTRRYHAHDEN--NECEIGDIVEIEE 61
Query: 364 CRPLSKTVRFNVLK 405
R LSKT F VLK
Sbjct: 62 SRKLSKTKAF-VLK 74
>UniRef50_P24321 Cluster: 30S ribosomal protein S17; n=6;
Bacteria|Rep: 30S ribosomal protein S17 - Thermus
thermophilus
Length = 105
Score = 48.4 bits (110), Expect = 1e-04
Identities = 30/77 (38%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Frame = +1
Query: 184 RILTGVVQKMKMQRTI--VIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVXIGDIVTI 357
++LTGVV KMQ+T+ ++ R + H P Y + KR + H P +GD+V I
Sbjct: 4 KVLTGVVVSDKMQKTVTVLVERQFPH--PLYGKVIKRSKKYLAH-DP-EEKYKLGDVVEI 59
Query: 358 GECRPLSKTVRFNVLKV 408
E RP+SK RF VL++
Sbjct: 60 IESRPISKRKRFRVLRL 76
>UniRef50_A7BRH2 Cluster: Ribosomal protein S17; n=1; Beggiatoa sp.
PS|Rep: Ribosomal protein S17 - Beggiatoa sp. PS
Length = 100
Score = 46.0 bits (104), Expect = 5e-04
Identities = 26/67 (38%), Positives = 34/67 (50%)
Frame = +1
Query: 184 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVXIGDIVTIGE 363
R L G V KM +TI + PKY ++ KR + VH +GDIV I +
Sbjct: 21 RTLIGQVVSDKMHKTITVLVSRKIKHPKYGKYIKRSTKLHVHDEE--NTCQVGDIVAISQ 78
Query: 364 CRPLSKT 384
CRP+SKT
Sbjct: 79 CRPISKT 85
>UniRef50_Q7VQD9 Cluster: 30S ribosomal protein S17; n=8;
Gammaproteobacteria|Rep: 30S ribosomal protein S17 -
Blochmannia floridanus
Length = 85
Score = 46.0 bits (104), Expect = 5e-04
Identities = 26/66 (39%), Positives = 39/66 (59%)
Frame = +1
Query: 187 ILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVXIGDIVTIGEC 366
+L G+V + KMQ++IV+ + + Y +F R + VH + +V GDIV I EC
Sbjct: 7 VLQGIVIRSKMQKSIVVSINRIVKHSMYKKFINRTTKIYVHDTNNISNV--GDIVEITEC 64
Query: 367 RPLSKT 384
RP+SKT
Sbjct: 65 RPISKT 70
>UniRef50_O66439 Cluster: 30S ribosomal protein S17; n=1; Aquifex
aeolicus|Rep: 30S ribosomal protein S17 - Aquifex
aeolicus
Length = 107
Score = 44.8 bits (101), Expect = 0.001
Identities = 27/73 (36%), Positives = 39/73 (53%)
Frame = +1
Query: 190 LTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVXIGDIVTIGECR 369
L GVV KM +T+V++ D P Y + + + H + +GDIV I E R
Sbjct: 17 LVGVVVSDKMDKTVVVKVDRKVPHPIYGKHIIKSKKYHAHDE--HNECRVGDIVMIRETR 74
Query: 370 PLSKTVRFNVLKV 408
PLSKT R+ V+K+
Sbjct: 75 PLSKTKRWVVVKI 87
>UniRef50_Q9PLY0 Cluster: 30S ribosomal protein S17; n=14;
Campylobacterales|Rep: 30S ribosomal protein S17 -
Campylobacter jejuni
Length = 83
Score = 43.6 bits (98), Expect = 0.003
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Frame = +1
Query: 184 RILTGVVQKMKMQRT--IVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVXIGDIVTI 357
R + GVV K+ ++T +++ R +H P+Y + KR + +H +V +GD V
Sbjct: 5 REIQGVVVKIAGEKTASVLVERKVVH--PRYRKIVKRFKKYLIHDER--NEVKVGDTVVA 60
Query: 358 GECRPLSKTVRFNVLKV 408
ECRPLSK F + V
Sbjct: 61 VECRPLSKRKSFRLKSV 77
>UniRef50_Q7WZS8 Cluster: 30S ribosomal protein S17; n=1; Candidatus
Portiera aleyrodidarum|Rep: 30S ribosomal protein S17 -
Candidatus Portiera aleyrodidarum
Length = 83
Score = 43.2 bits (97), Expect = 0.004
Identities = 27/79 (34%), Positives = 42/79 (53%)
Frame = +1
Query: 172 SIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVXIGDIV 351
+I+ R + G V KM +TIV+ + L Y ++ KR + +SVH S IGDIV
Sbjct: 4 NIKVRKIKGKVVSNKMNKTIVVLIERLFKHKTYGKYIKRSKKLSVHDSK--NKAEIGDIV 61
Query: 352 TIGECRPLSKTVRFNVLKV 408
E +SKT + ++K+
Sbjct: 62 ECAESLKISKTKSWILIKI 80
>UniRef50_Q7M8E2 Cluster: 30S ribosomal protein S17; n=11;
Epsilonproteobacteria|Rep: 30S ribosomal protein S17 -
Wolinella succinogenes
Length = 88
Score = 43.2 bits (97), Expect = 0.004
Identities = 28/78 (35%), Positives = 41/78 (52%)
Frame = +1
Query: 175 IRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVXIGDIVT 354
I+G+++T K TI++ R H PKY + KR + VH V +GD++
Sbjct: 11 IQGKVVTKAGDKSV---TILVERRVTH--PKYRKIVKRFKKYIVHDES--NAVKVGDMIE 63
Query: 355 IGECRPLSKTVRFNVLKV 408
ECRPLSK F++ KV
Sbjct: 64 AIECRPLSKRKSFSLHKV 81
>UniRef50_Q6KI46 Cluster: 30S ribosomal protein S17; n=3;
Mycoplasma|Rep: 30S ribosomal protein S17 - Mycoplasma
mobile
Length = 92
Score = 42.7 bits (96), Expect = 0.005
Identities = 28/77 (36%), Positives = 38/77 (49%)
Frame = +1
Query: 178 RGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVXIGDIVTI 357
R + LTGVV K +TIV+ D P Y + K + + H + +GDIV I
Sbjct: 7 RRKALTGVVVSDKSSKTIVVAVDTFKKDPLYQKRFKSTKKFAAHDEK--EEAQMGDIVKI 64
Query: 358 GECRPLSKTVRFNVLKV 408
RPLSKT F + K+
Sbjct: 65 VGTRPLSKTKFFRLEKI 81
>UniRef50_Q5FTZ2 Cluster: 30S ribosomal protein S17; n=5;
Proteobacteria|Rep: 30S ribosomal protein S17 -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 90
Score = 42.7 bits (96), Expect = 0.005
Identities = 24/73 (32%), Positives = 37/73 (50%)
Frame = +1
Query: 184 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVXIGDIVTIGE 363
R+LTG V KM +T+ + D P Y +F +R + + H GD+V I E
Sbjct: 4 RVLTGRVTSDKMDKTVTVLLDRRIMHPLYKKFIRRSKKYAAHDEE--NVCQTGDLVRIEE 61
Query: 364 CRPLSKTVRFNVL 402
C P+SK ++V+
Sbjct: 62 CAPISKRKTWSVV 74
>UniRef50_Q3ZZL5 Cluster: 30S ribosomal protein S17; n=7; cellular
organisms|Rep: 30S ribosomal protein S17 -
Dehalococcoides sp. (strain CBDB1)
Length = 90
Score = 42.7 bits (96), Expect = 0.005
Identities = 25/80 (31%), Positives = 41/80 (51%)
Frame = +1
Query: 169 VSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVXIGDI 348
+ I+ + G V KM++TIV+ D + P Y + +R VH + IGD+
Sbjct: 1 MEIKNKTRIGHVISDKMEKTIVVGIDVVKRHPLYKKTYRRTMKYLVHDEK--NEAKIGDM 58
Query: 349 VTIGECRPLSKTVRFNVLKV 408
+ I ECRP+SK + + K+
Sbjct: 59 IEIVECRPISKGKYWRLSKI 78
>UniRef50_Q6SG39 Cluster: 30S ribosomal protein S17; n=1; uncultured
bacterium 562|Rep: 30S ribosomal protein S17 -
uncultured bacterium 562
Length = 95
Score = 42.3 bits (95), Expect = 0.006
Identities = 26/71 (36%), Positives = 35/71 (49%)
Frame = +1
Query: 172 SIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVXIGDIV 351
S RIL+GVV K +TI ++ + P Y + KR + H IGD V
Sbjct: 3 STNPRILSGVVISDKADKTITVKIERKVKHPLYGKVMKRATKVHAHDEN--NSAAIGDQV 60
Query: 352 TIGECRPLSKT 384
T+ ECRP SK+
Sbjct: 61 TVKECRPFSKS 71
>UniRef50_Q31IX3 Cluster: 30S ribosomal protein S17; n=1;
Thiomicrospira crunogena XCL-2|Rep: 30S ribosomal
protein S17 - Thiomicrospira crunogena (strain XCL-2)
Length = 87
Score = 41.1 bits (92), Expect = 0.015
Identities = 21/77 (27%), Positives = 39/77 (50%)
Frame = +1
Query: 178 RGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVXIGDIVTI 357
+ R + GVV M +++V+ + PKY +F ++ + H + +GD VTI
Sbjct: 7 KARTMQGVVVSNGMDKSVVVMTNRYIKHPKYKKFVRKSTKVMAHDAD--NACGVGDRVTI 64
Query: 358 GECRPLSKTVRFNVLKV 408
EC P SK ++++ +
Sbjct: 65 SECTPFSKRKTWSLVSI 81
>UniRef50_Q9Z7R6 Cluster: 30S ribosomal protein S17; n=11;
Bacteria|Rep: 30S ribosomal protein S17 - Chlamydia
pneumoniae (Chlamydophila pneumoniae)
Length = 86
Score = 41.1 bits (92), Expect = 0.015
Identities = 24/74 (32%), Positives = 39/74 (52%)
Frame = +1
Query: 184 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVXIGDIVTIGE 363
++ GVV KM++T+V+R + + P+Y + + + H V GD V I E
Sbjct: 10 KVKIGVVVSAKMEKTVVVRVERIFSHPQYLKVVRSSKKYYAHTE---LKVSEGDKVKIQE 66
Query: 364 CRPLSKTVRFNVLK 405
RPLSK R+ V++
Sbjct: 67 TRPLSKLKRWRVIE 80
>UniRef50_Q67JV2 Cluster: 30S ribosomal protein S17; n=4;
Bacteria|Rep: 30S ribosomal protein S17 -
Symbiobacterium thermophilum
Length = 94
Score = 40.7 bits (91), Expect = 0.020
Identities = 24/71 (33%), Positives = 36/71 (50%)
Frame = +1
Query: 196 GVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVXIGDIVTIGECRPL 375
GVV KM +T+V+ + L P Y + +R + H +GD V I E RPL
Sbjct: 13 GVVTSDKMDKTVVVAVETLVQHPLYKKRVRRTKKFKAHDE--HNQCKVGDKVRIMETRPL 70
Query: 376 SKTVRFNVLKV 408
SK R+ V+++
Sbjct: 71 SKEKRWRVVEI 81
>UniRef50_Q7MTM2 Cluster: 30S ribosomal protein S17; n=2; cellular
organisms|Rep: 30S ribosomal protein S17 - Porphyromonas
gingivalis (Bacteroides gingivalis)
Length = 84
Score = 40.7 bits (91), Expect = 0.020
Identities = 23/71 (32%), Positives = 35/71 (49%)
Frame = +1
Query: 196 GVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVXIGDIVTIGECRPL 375
GVV KM +TI + + P Y +F + + H + IGD V I E RPL
Sbjct: 11 GVVSSNKMDKTITVAVKWKEKHPIYGKFVNKTKKYHAHDEK--NECGIGDTVRIMETRPL 68
Query: 376 SKTVRFNVLKV 408
S+T R+ + ++
Sbjct: 69 SRTKRWRLTEI 79
>UniRef50_Q1ISB3 Cluster: 30S ribosomal protein S17; n=5;
Bacteria|Rep: 30S ribosomal protein S17 - Acidobacteria
bacterium (strain Ellin345)
Length = 101
Score = 40.7 bits (91), Expect = 0.020
Identities = 26/73 (35%), Positives = 36/73 (49%)
Frame = +1
Query: 190 LTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVXIGDIVTIGECR 369
L G+V KMQ+TIV++ + Y R R + H + IGD V I E R
Sbjct: 16 LIGLVVSTKMQKTIVVQVERQKSHAMYGRVISRRKRFYAHDEE--QTAHIGDYVRIEETR 73
Query: 370 PLSKTVRFNVLKV 408
PLSK R+ + +V
Sbjct: 74 PLSKLKRWKLAEV 86
>UniRef50_UPI00006CFC97 Cluster: ribosomal protein S17 containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
ribosomal protein S17 containing protein - Tetrahymena
thermophila SB210
Length = 205
Score = 39.9 bits (89), Expect = 0.035
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +1
Query: 181 GRILTG-VVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVXIGDIVTI 357
GR L G V+Q KM +T+ ++ DY ++ PK F+ + VH S F GD V I
Sbjct: 24 GRELFGTVIQHGKMDKTVTVKVDYRYWYPKTKEFKSKTSKYQVHDSENF--CVTGDKVVI 81
Query: 358 GECRPLSKTVRFNVLKV 408
P+S + V +
Sbjct: 82 KSMLPISTMKHYYVRNI 98
>UniRef50_Q92QG1 Cluster: 30S ribosomal protein S17; n=7;
Bacteria|Rep: 30S ribosomal protein S17 - Rhizobium
meliloti (Sinorhizobium meliloti)
Length = 78
Score = 39.9 bits (89), Expect = 0.035
Identities = 23/73 (31%), Positives = 36/73 (49%)
Frame = +1
Query: 184 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVXIGDIVTIGE 363
RIL G V K +T+V+R + P + +R + H +GD+V+I E
Sbjct: 4 RILQGTVVSDKNDKTVVVRVERRFAHPILQKTVRRSKKYKAHDEN--NQFKVGDLVSIEE 61
Query: 364 CRPLSKTVRFNVL 402
C P+SK R+ V+
Sbjct: 62 CAPISKDKRWTVV 74
>UniRef50_Q8FS73 Cluster: 30S ribosomal protein S17; n=9;
Bacteria|Rep: 30S ribosomal protein S17 -
Corynebacterium efficiens
Length = 92
Score = 39.9 bits (89), Expect = 0.035
Identities = 22/75 (29%), Positives = 39/75 (52%)
Frame = +1
Query: 184 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVXIGDIVTIGE 363
++ TG V KMQ+TIV+ + Y++ + ++ + H IGD+V I E
Sbjct: 15 KVRTGYVVSDKMQKTIVVELEDRKQHALYSKILRTNKKVKAHDEENI--AGIGDLVRIEE 72
Query: 364 CRPLSKTVRFNVLKV 408
RPLSK + ++++
Sbjct: 73 TRPLSKDKNYRLIEI 87
>UniRef50_Q5P323 Cluster: 30S ribosomal protein S17; n=130;
Bacteria|Rep: 30S ribosomal protein S17 - Azoarcus sp.
(strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 89
Score = 39.1 bits (87), Expect = 0.060
Identities = 28/77 (36%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Frame = +1
Query: 184 RILTGVVQKMKMQRTI--VIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVXIGDIVTI 357
R L G V KMQ T+ ++ R H L Y + R H+ GD+V I
Sbjct: 10 RALVGRVVSDKMQNTVTVLVERRVKHEL--YGKVITRSAKYHAHVED--GGAAAGDLVEI 65
Query: 358 GECRPLSKTVRFNVLKV 408
ECRP+SKT + V KV
Sbjct: 66 EECRPISKTKSWRVAKV 82
>UniRef50_Q50309 Cluster: 30S ribosomal protein S17; n=4;
Bacteria|Rep: 30S ribosomal protein S17 - Mycoplasma
pneumoniae
Length = 85
Score = 38.7 bits (86), Expect = 0.080
Identities = 23/75 (30%), Positives = 36/75 (48%)
Frame = +1
Query: 184 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVXIGDIVTIGE 363
++L G+V+ K +T ++ + P Y++ RH+ H GD V I E
Sbjct: 7 KVLIGIVKSTKNAKTATVQVESRFKHPLYHKSVVRHKKYQAHNEGEVL-AKDGDKVQIVE 65
Query: 364 CRPLSKTVRFNVLKV 408
RPLS T RF + K+
Sbjct: 66 TRPLSATKRFRIAKI 80
>UniRef50_Q01WA1 Cluster: 30S ribosomal protein S17; n=3;
Bacteria|Rep: 30S ribosomal protein S17 - Solibacter
usitatus (strain Ellin6076)
Length = 102
Score = 38.3 bits (85), Expect = 0.11
Identities = 24/71 (33%), Positives = 33/71 (46%)
Frame = +1
Query: 196 GVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVXIGDIVTIGECRPL 375
G V KMQ+TIV+ P Y R + + H +GD+V I ECRPL
Sbjct: 16 GEVVSTKMQKTIVVEVSRRVPHPLYKRIIGKRKKFYAHDEE--GRANLGDVVRIIECRPL 73
Query: 376 SKTVRFNVLKV 408
SK R+ + +
Sbjct: 74 SKLKRWRLADI 84
>UniRef50_Q7UN11 Cluster: 30S ribosomal protein S17; n=4;
Planctomycetaceae|Rep: 30S ribosomal protein S17 -
Rhodopirellula baltica
Length = 117
Score = 38.3 bits (85), Expect = 0.11
Identities = 24/75 (32%), Positives = 38/75 (50%)
Frame = +1
Query: 184 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVXIGDIVTIGE 363
R++ G+V KM +T + L PKY ++ +R VH + +GD V I E
Sbjct: 4 RVVAGIVTSDKMSKTRRVEIARLVKHPKYKKYIRRRTVCHVHDEN--NESGVGDKVEIIE 61
Query: 364 CRPLSKTVRFNVLKV 408
PLSK R+ +++V
Sbjct: 62 SEPLSKLKRWRLVRV 76
>UniRef50_Q601K5 Cluster: 30S ribosomal protein S17; n=4; Mycoplasma
hyopneumoniae|Rep: 30S ribosomal protein S17 -
Mycoplasma hyopneumoniae (strain 232)
Length = 98
Score = 37.9 bits (84), Expect = 0.14
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Frame = +1
Query: 184 RILTGVVQKMKMQRTIV-IRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVXIGDIVTIG 360
+ L G+V + + +V + Y H L RF+KR + + H +V GD V I
Sbjct: 20 KTLQGIVIRTSPKTIMVEVETAYKHKLYA-KRFKKR-KKFNTHDEKNLAEV--GDFVKIA 75
Query: 361 ECRPLSKTVRFNVLKV 408
ECRP+SKT F +++V
Sbjct: 76 ECRPISKTKHFRLVEV 91
>UniRef50_O06051 Cluster: 30S ribosomal protein S17; n=22;
Bacteria|Rep: 30S ribosomal protein S17 - Mycobacterium
bovis
Length = 135
Score = 37.9 bits (84), Expect = 0.14
Identities = 26/88 (29%), Positives = 41/88 (46%)
Frame = +1
Query: 145 KKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCF 324
K P T R + G V KMQ+TIV+ + P Y + + + + H
Sbjct: 45 KHTPRTPKPRGRRKTRIGYVVSDKMQKTIVVELEDRMRHPLYGKIIRTTKKVKAHDEDSV 104
Query: 325 RDVXIGDIVTIGECRPLSKTVRFNVLKV 408
IGD V++ E RPLS T R+ ++++
Sbjct: 105 --AGIGDRVSLMETRPLSATKRWRLVEI 130
>UniRef50_Q9UUB0 Cluster: Mitochondrial ribosomal protein subunit
S17; n=1; Schizosaccharomyces pombe|Rep: Mitochondrial
ribosomal protein subunit S17 - Schizosaccharomyces
pombe (Fission yeast)
Length = 90
Score = 37.1 bits (82), Expect = 0.24
Identities = 21/71 (29%), Positives = 35/71 (49%)
Frame = +1
Query: 196 GVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVXIGDIVTIGECRPL 375
G+V M +T +R + P ++ +++N V + +GD VTI CRP
Sbjct: 7 GIVISRAMPKTAKVRVAKEKFHPVVKKYVTQYQNYMVQDD---LNCNVGDAVTIQPCRPR 63
Query: 376 SKTVRFNVLKV 408
S T RF ++K+
Sbjct: 64 SATKRFEIIKI 74
>UniRef50_Q3YRL8 Cluster: 30S ribosomal protein S17; n=9;
Rickettsiales|Rep: 30S ribosomal protein S17 - Ehrlichia
canis (strain Jake)
Length = 83
Score = 37.1 bits (82), Expect = 0.24
Identities = 23/73 (31%), Positives = 36/73 (49%)
Frame = +1
Query: 184 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVXIGDIVTIGE 363
++LTGVV K +TI + + Y + K+ +N VH + GD+V I E
Sbjct: 13 KVLTGVVVATKCDKTIKVMVSRMVRHKTYKKIVKKRKNYVVHDE--YNKCKCGDVVKIQE 70
Query: 364 CRPLSKTVRFNVL 402
P+S T R+ V+
Sbjct: 71 HIPISATKRWIVI 83
>UniRef50_A3EVR2 Cluster: 30S ribosomal protein S17; n=1;
Leptospirillum sp. Group II UBA|Rep: 30S ribosomal
protein S17 - Leptospirillum sp. Group II UBA
Length = 95
Score = 36.7 bits (81), Expect = 0.32
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Frame = +1
Query: 196 GVVQKMKMQRTIV--IRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVXIGDIVTIGECR 369
GVV KM +T+V I+R LH P Y++ R + H + +G +V I R
Sbjct: 20 GVVVGNKMMKTVVVEIQRRVLH--PLYHKVVSRRTRIKAHTQ---EPIEVGSVVEIISTR 74
Query: 370 PLSKTVRFNVLKV 408
P+SK VL+V
Sbjct: 75 PISKDKSHRVLRV 87
>UniRef50_Q6CCN7 Cluster: Yarrowia lipolytica chromosome C of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome C of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 232
Score = 36.7 bits (81), Expect = 0.32
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Frame = +1
Query: 178 RGR-ILTGVVQKM--KMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVH--LSPCFRDVXIG 342
RGR GVV ++ K ++I +R Y+P + HR+ H + C G
Sbjct: 9 RGRQSFVGVVTRLGPKGSKSIKVRVTRRKYMPAILKEINFHRDFYTHDEMMACQE----G 64
Query: 343 DIVTIGECRPLSKTVRFNVLKV 408
D+V I +CRP+SKT F V ++
Sbjct: 65 DVVRIEQCRPISKTKHFAVAEI 86
>UniRef50_Q7NEG1 Cluster: 30S ribosomal protein S17; n=7; cellular
organisms|Rep: 30S ribosomal protein S17 - Gloeobacter
violaceus
Length = 83
Score = 36.7 bits (81), Expect = 0.32
Identities = 25/71 (35%), Positives = 34/71 (47%)
Frame = +1
Query: 196 GVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVXIGDIVTIGECRPL 375
G+V MQ+T+V+ + PKY + R R H +GD V I E PL
Sbjct: 8 GLVVSDAMQKTVVVAVENRVPHPKYKKIVVRTRKFKAHDEE--NRCKVGDRVRILESPPL 65
Query: 376 SKTVRFNVLKV 408
SKT R+ VL +
Sbjct: 66 SKTKRWVVLDI 76
>UniRef50_Q6C8W4 Cluster: Patatin-like phospholipase
domain-containing protein YALI0D16379g; n=1; Yarrowia
lipolytica|Rep: Patatin-like phospholipase
domain-containing protein YALI0D16379g - Yarrowia
lipolytica (Candida lipolytica)
Length = 818
Score = 36.7 bits (81), Expect = 0.32
Identities = 25/84 (29%), Positives = 36/84 (42%)
Frame = +1
Query: 52 VKRSRKPLRYHKDVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTI 231
+K P+ V P E ++ YI K +T S+ V K KM T
Sbjct: 82 LKEEEVPVESSTPVSSEEMLPLEPVQKEYITSKHDWTPVFSVLKN--NNSVNKRKMSHT- 138
Query: 232 VIRRDYLHYLPKYNRFEKRHRNMS 303
++ D+ HYL Y++ EKR R S
Sbjct: 139 ALKSDFKHYLDMYDKEEKRRRGKS 162
>UniRef50_Q9LHN1 Cluster: 40S ribosomal protein S17-like; n=8;
Magnoliophyta|Rep: 40S ribosomal protein S17-like -
Arabidopsis thaliana (Mouse-ear cress)
Length = 105
Score = 36.3 bits (80), Expect = 0.43
Identities = 23/66 (34%), Positives = 31/66 (46%)
Frame = +1
Query: 184 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVXIGDIVTIGE 363
+ + G V KMQ ++V+ D L + YNR+ KR H IGD V +
Sbjct: 2 KAVIGTVVSNKMQMSVVVAVDRLFHNNIYNRYVKRTSKFMAHDEK--DSCNIGDRVKLDP 59
Query: 364 CRPLSK 381
RPLSK
Sbjct: 60 SRPLSK 65
>UniRef50_Q6MJ23 Cluster: 30S ribosomal protein S17; n=12;
Bacteria|Rep: 30S ribosomal protein S17 - Bdellovibrio
bacteriovorus
Length = 89
Score = 36.3 bits (80), Expect = 0.43
Identities = 28/79 (35%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Frame = +1
Query: 178 RGRIL--TGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVXIGDIV 351
RGR + G V KM +TI + + KY ++ K+ H IGDIV
Sbjct: 7 RGRKIEVVGEVISDKMDKTISVLIYRMVKHAKYGKYVKKTSVFKAHDEK--NQAKIGDIV 64
Query: 352 TIGECRPLSKTVRFNVLKV 408
I E RPLSKT R+ + +V
Sbjct: 65 KIRETRPLSKTKRWALAEV 83
>UniRef50_Q8ABV5 Cluster: 30S ribosomal protein S17 2; n=2;
Bacteroides thetaiotaomicron|Rep: 30S ribosomal protein
S17 2 - Bacteroides thetaiotaomicron
Length = 98
Score = 36.3 bits (80), Expect = 0.43
Identities = 22/68 (32%), Positives = 33/68 (48%)
Frame = +1
Query: 190 LTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVXIGDIVTIGECR 369
+ G+V KMQ+T+VI + PKY + + + +H P + +GD V E R
Sbjct: 26 IEGIVVSTKMQKTVVIEVERTKKHPKYGKTVQYTKKYKIH-DP-LEECSVGDRVLAHETR 83
Query: 370 PLSKTVRF 393
SKT F
Sbjct: 84 HFSKTKYF 91
>UniRef50_Q9TJN6 Cluster: 30S ribosomal protein S17, chloroplast
precursor; n=13; Magnoliophyta|Rep: 30S ribosomal
protein S17, chloroplast precursor - Zea mays (Maize)
Length = 132
Score = 36.3 bits (80), Expect = 0.43
Identities = 24/70 (34%), Positives = 33/70 (47%)
Frame = +1
Query: 184 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVXIGDIVTIGE 363
R LTG V K +T+ + L PKY R E+ + H P +GD+V +
Sbjct: 33 RQLTGRVVTTKADKTVGVEVVRLAPHPKYKRRERIKKKYQAH-DPD-NQFKVGDVVELQP 90
Query: 364 CRPLSKTVRF 393
RP+SKT F
Sbjct: 91 SRPISKTKHF 100
>UniRef50_Q9PE67 Cluster: 30S ribosomal protein S17; n=52;
Bacteria|Rep: 30S ribosomal protein S17 - Xylella
fastidiosa
Length = 89
Score = 35.9 bits (79), Expect = 0.56
Identities = 22/79 (27%), Positives = 43/79 (54%)
Frame = +1
Query: 172 SIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVXIGDIV 351
+I+GR+++ +QK T+++ R H L Y ++ KR + H + + GD+V
Sbjct: 13 TIKGRVISNKMQKTV---TVLVERQIKHAL--YGKYIKRSTKLHAHDADDLCNE--GDVV 65
Query: 352 TIGECRPLSKTVRFNVLKV 408
+ E P+SKT + V+++
Sbjct: 66 LMTEVAPISKTKNWRVVEI 84
>UniRef50_O46903 Cluster: Chloroplast 30S ribosomal protein S17;
n=23; cellular organisms|Rep: Chloroplast 30S ribosomal
protein S17 - Guillardia theta (Cryptomonas phi)
Length = 90
Score = 35.9 bits (79), Expect = 0.56
Identities = 24/75 (32%), Positives = 40/75 (53%)
Frame = +1
Query: 169 VSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVXIGDI 348
+SI+ R+ G+V KM +T+V+ +Y + + + VH P + +GD+
Sbjct: 1 MSIKERL--GLVISDKMDKTVVVSIANRVTHKRYGKIVTKTKKYKVH-DPN-NNCQVGDL 56
Query: 349 VTIGECRPLSKTVRF 393
+ I E RPLSKT R+
Sbjct: 57 ILINETRPLSKTKRW 71
>UniRef50_A3VT29 Cluster: 30S ribosomal protein S17; n=2;
Alphaproteobacteria|Rep: 30S ribosomal protein S17 -
Parvularcula bermudensis HTCC2503
Length = 93
Score = 35.5 bits (78), Expect = 0.74
Identities = 22/73 (30%), Positives = 35/73 (47%)
Frame = +1
Query: 184 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVXIGDIVTIGE 363
RIL G + K ++T+V+R D P + +R + H ++ +G V I E
Sbjct: 4 RILQGPIVSDKGEKTVVVRVDRAFKHPLLAKVVRRSKRYHAHDES--NELKVGQRVLIRE 61
Query: 364 CRPLSKTVRFNVL 402
C P SK R+ V+
Sbjct: 62 CPPKSKLKRWEVV 74
>UniRef50_Q2JFG7 Cluster: 30S ribosomal protein S17; n=19;
Bacteria|Rep: 30S ribosomal protein S17 - Frankia sp.
(strain CcI3)
Length = 102
Score = 35.5 bits (78), Expect = 0.74
Identities = 21/75 (28%), Positives = 38/75 (50%)
Frame = +1
Query: 184 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVXIGDIVTIGE 363
++ G+V KM +T+V+ + P Y + +R + + H +GD V + E
Sbjct: 25 KVREGLVVSDKMTKTVVVAVEDRVQHPLYGKTIRRTKKVKAHDES--GTTGVGDRVLLME 82
Query: 364 CRPLSKTVRFNVLKV 408
RPLS T R+ +++V
Sbjct: 83 TRPLSATKRWRIVQV 97
>UniRef50_Q6G2X4 Cluster: 30S ribosomal protein S17; n=19;
Alphaproteobacteria|Rep: 30S ribosomal protein S17 -
Bartonella henselae (Rochalimaea henselae)
Length = 79
Score = 35.1 bits (77), Expect = 0.98
Identities = 21/74 (28%), Positives = 37/74 (50%)
Frame = +1
Query: 184 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVXIGDIVTIGE 363
R+L GVV K +T+V++ + + P + ++ + H IGD + I E
Sbjct: 4 RVLQGVVVSDKNDKTVVVKVERRYSHPLLKKTVRQSKKYKAHDES--NQFKIGDQIFIQE 61
Query: 364 CRPLSKTVRFNVLK 405
+P+SK R+ V+K
Sbjct: 62 SKPISKDKRWIVVK 75
>UniRef50_A1UB26 Cluster: Putative uncharacterized protein; n=3;
Mycobacterium|Rep: Putative uncharacterized protein -
Mycobacterium sp. (strain KMS)
Length = 2125
Score = 34.7 bits (76), Expect = 1.3
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +1
Query: 70 PLRYHKDVGLGFKTPREAIEGTYIDKKCPFTGN 168
P Y +D G GF PRE GT++ +CP G+
Sbjct: 2015 PAEYKRDDGEGFYWPREIDPGTWLSVRCPVEGS 2047
>UniRef50_A6UND3 Cluster: Heat shock protein DnaJ domain protein;
n=1; Methanococcus vannielii SB|Rep: Heat shock protein
DnaJ domain protein - Methanococcus vannielii SB
Length = 1061
Score = 34.3 bits (75), Expect = 1.7
Identities = 18/42 (42%), Positives = 26/42 (61%)
Frame = -1
Query: 437 KDFFEPLPFETFKTLNLTVLDKGLHSPIVTISPIXTSLKQGD 312
K++FE LP+ K L++ LDK + S I TI I LK+G+
Sbjct: 596 KNYFESLPYYK-KVLSINPLDKNVESKIKTIEKISELLKRGN 636
>UniRef50_Q62GL4 Cluster: 30S ribosomal protein S17; n=144;
Bacteria|Rep: 30S ribosomal protein S17 - Burkholderia
mallei (Pseudomonas mallei)
Length = 90
Score = 34.3 bits (75), Expect = 1.7
Identities = 22/75 (29%), Positives = 35/75 (46%)
Frame = +1
Query: 184 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVXIGDIVTIGE 363
R L G V KM +T+ + ++ P Y ++ R + H GD+V I E
Sbjct: 11 RTLVGKVVSNKMDKTVTVLVEHRVKHPIYGKYVVRSKKYHAHDEA--NTYNEGDLVEIQE 68
Query: 364 CRPLSKTVRFNVLKV 408
RP+SKT + V ++
Sbjct: 69 TRPVSKTKAWAVSRL 83
>UniRef50_Q4FUE7 Cluster: 30S ribosomal protein S17; n=16;
Gammaproteobacteria|Rep: 30S ribosomal protein S17 -
Psychrobacter arcticum
Length = 91
Score = 33.9 bits (74), Expect = 2.3
Identities = 23/74 (31%), Positives = 36/74 (48%)
Frame = +1
Query: 187 ILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVXIGDIVTIGEC 366
+LTG V KM ++I + + L P Y + +R + H GD+V I E
Sbjct: 13 VLTGRVVSDKMDKSITVLIERLVRHPLYGKQLRRSTKIKAHDEN--NVCQQGDLVRIKET 70
Query: 367 RPLSKTVRFNVLKV 408
RP+SKT + ++ V
Sbjct: 71 RPISKTKSWTLVDV 84
>UniRef50_Q6A6N5 Cluster: 30S ribosomal protein S17; n=133; cellular
organisms|Rep: 30S ribosomal protein S17 -
Propionibacterium acnes
Length = 90
Score = 33.9 bits (74), Expect = 2.3
Identities = 22/83 (26%), Positives = 39/83 (46%)
Frame = +1
Query: 160 TGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVXI 339
T + R ++ G+V KM +TI + + P Y + + + H + +
Sbjct: 5 TAERTTRRKVREGLVVSDKMNKTITVMVEDRVKHPLYGKVMTKSVRLKAHDEN--NEAGM 62
Query: 340 GDIVTIGECRPLSKTVRFNVLKV 408
GD V I E RPLS T R+ ++++
Sbjct: 63 GDRVRIMETRPLSATKRWRLVEI 85
>UniRef50_Q9XD27 Cluster: 30S ribosomal protein S17; n=14;
Bacteria|Rep: 30S ribosomal protein S17 - Leptospira
interrogans
Length = 89
Score = 33.9 bits (74), Expect = 2.3
Identities = 21/71 (29%), Positives = 33/71 (46%)
Frame = +1
Query: 196 GVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVXIGDIVTIGECRPL 375
G V M +T+VI + PK+ + +R + VH + +GD + E RPL
Sbjct: 16 GRVVSNSMNKTVVILVETRKTHPKFKKIVRRSVRLKVHDEK--NECVVGDKILAIETRPL 73
Query: 376 SKTVRFNVLKV 408
SK R + K+
Sbjct: 74 SKEKRHRLYKI 84
>UniRef50_Q14591-2 Cluster: Isoform 2 of Q14591 ; n=2; Homo
sapiens|Rep: Isoform 2 of Q14591 - Homo sapiens (Human)
Length = 423
Score = 33.5 bits (73), Expect = 3.0
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = -1
Query: 179 RIETL-PVKGHFLSM*VPSIASRGVLKPRPTSLWYLNGFLLRFTPIPFLRFRK 24
RI+TL ++G L ++ S G L R SL+Y+ GF+L PIP + K
Sbjct: 37 RIQTLLNIEGSTLERNPINVMSVGKLLIRAQSLFYIRGFILERNPIPVINVAK 89
>UniRef50_A3TU64 Cluster: 30S ribosomal protein S17; n=3;
Rhodobacteraceae|Rep: 30S ribosomal protein S17 -
Oceanicola batsensis HTCC2597
Length = 109
Score = 33.5 bits (73), Expect = 3.0
Identities = 28/76 (36%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Frame = +1
Query: 184 RILTGVVQKMKMQRTIVI--RRDYLH-YLPKYNRFEKRHRNMSVHLSPCFRDVXIGDIVT 354
RIL GVV +T+ + R + H L K R K++R F+ GDIV
Sbjct: 4 RILRGVVTSDANAQTVTVSVERRFTHPVLQKTIRKSKKYRAHDA--DNAFKK---GDIVR 58
Query: 355 IGECRPLSKTVRFNVL 402
I EC P SKT R+ V+
Sbjct: 59 IQECAPKSKTKRWEVM 74
>UniRef50_Q9HJI5 Cluster: Putative uncharacterized protein Ta0983;
n=1; Thermoplasma acidophilum|Rep: Putative
uncharacterized protein Ta0983 - Thermoplasma
acidophilum
Length = 322
Score = 33.1 bits (72), Expect = 4.0
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = +1
Query: 235 IRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVXIGDIVTIGE 363
IRRD L+ + +YNR R + + P F IG+IV IGE
Sbjct: 182 IRRDDLNRIDRYNRIRITGRR--IRMKPLFEVASIGNIVGIGE 222
>UniRef50_Q85FV4 Cluster: Chloroplast 30S ribosomal protein S17;
n=1; Cyanidioschyzon merolae|Rep: Chloroplast 30S
ribosomal protein S17 - Cyanidioschyzon merolae (Red
alga)
Length = 82
Score = 33.1 bits (72), Expect = 4.0
Identities = 20/70 (28%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Frame = +1
Query: 190 LTGVVQKMKMQRTIVI--RRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVXIGDIVTIGE 363
L G+V +MQ+T+++ + H L Y + + + +VH P + +G+++ I
Sbjct: 4 LLGLVVSCRMQKTVIVEVKTQVKHAL--YGKRIMKKKRYAVH-DP-EKKASLGELIWIRT 59
Query: 364 CRPLSKTVRF 393
CRP+SKT ++
Sbjct: 60 CRPISKTKKW 69
>UniRef50_Q1NPK7 Cluster: 30S ribosomal protein S17; n=2;
Proteobacteria|Rep: 30S ribosomal protein S17 - delta
proteobacterium MLMS-1
Length = 86
Score = 31.9 bits (69), Expect = 9.2
Identities = 23/77 (29%), Positives = 35/77 (45%)
Frame = +1
Query: 178 RGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVXIGDIVTI 357
R + G+V KM++TIVI Y ++ +R + +GD V I
Sbjct: 7 RKKTQEGLVISNKMEKTIVIETTRFTPHKLYGKYIRRR--VKYLADDPEGTCQVGDRVLI 64
Query: 358 GECRPLSKTVRFNVLKV 408
ECRPLS+ R+ + V
Sbjct: 65 EECRPLSRRKRWRLRSV 81
>UniRef50_Q1AU38 Cluster: 30S ribosomal protein S17; n=18;
Bacteria|Rep: 30S ribosomal protein S17 - Rubrobacter
xylanophilus (strain DSM 9941 / NBRC 16129)
Length = 138
Score = 31.9 bits (69), Expect = 9.2
Identities = 19/71 (26%), Positives = 33/71 (46%)
Frame = +1
Query: 196 GVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVXIGDIVTIGECRPL 375
G+V +T+ + + L P Y + +R + VH + +GD V I E RPL
Sbjct: 65 GLVVSDAADKTVTVSVETLKEHPMYKKRIRRSKKFLVHDER--NEARVGDTVRIIETRPL 122
Query: 376 SKTVRFNVLKV 408
S+ R+ + +
Sbjct: 123 SRRKRWRLASI 133
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 484,754,914
Number of Sequences: 1657284
Number of extensions: 8766834
Number of successful extensions: 20971
Number of sequences better than 10.0: 80
Number of HSP's better than 10.0 without gapping: 20408
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20919
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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