Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS302D10f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    24   3.6  
AY146753-1|AAO12068.1|  311|Anopheles gambiae odorant-binding pr...    23   8.2  
AY146750-1|AAO12065.1|  311|Anopheles gambiae odorant-binding pr...    23   8.2  

>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -2

Query: 430  DNKKKIQPVIS*LPRS*KKTYKI 362
            D+KKKIQ +I+ L    KK  K+
Sbjct: 1008 DDKKKIQAIITDLDEEKKKKLKV 1030


>AY146753-1|AAO12068.1|  311|Anopheles gambiae odorant-binding
           protein AgamOBP34 protein.
          Length = 311

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 229 NVQTAVSFQNQLAISCKQ 176
           N QT    QNQ  ++CK+
Sbjct: 237 NAQTVACLQNQKKLACKK 254


>AY146750-1|AAO12065.1|  311|Anopheles gambiae odorant-binding
           protein AgamOBP37 protein.
          Length = 311

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 229 NVQTAVSFQNQLAISCKQ 176
           N QT    QNQ  ++CK+
Sbjct: 237 NAQTVACLQNQKKLACKK 254


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 400,237
Number of Sequences: 2352
Number of extensions: 5401
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)