Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS302D09f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    21   5.0  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    21   5.0  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   8.7  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   8.7  

>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = +1

Query: 154 PQHEQAHQESLHISF 198
           PQH Q H +  H+ +
Sbjct: 176 PQHHQPHHQQQHMMY 190


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = +1

Query: 154 PQHEQAHQESLHISF 198
           PQH Q H +  H+ +
Sbjct: 178 PQHHQPHHQQQHMMY 192


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +2

Query: 326 IHLIFYCTEI 355
           IHL+FYC  I
Sbjct: 224 IHLLFYCVLI 233


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 6/6 (100%), Positives = 6/6 (100%)
 Frame = -2

Query: 256 YNPPDH 239
           YNPPDH
Sbjct: 285 YNPPDH 290


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,901
Number of Sequences: 336
Number of extensions: 2147
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)