Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS302D09f
(521 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC631.02 |||bromodomain protein|Schizosaccharomyces pombe|chr ... 115 5e-27
SPCC1450.02 ||SPCC191.13|bromodomain protein|Schizosaccharomyces... 110 1e-25
SPAC1952.05 |gcn5||histone acetyltransferase Gcn5|Schizosaccharo... 65 7e-12
SPBC25H2.11c |||bromodomain protein|Schizosaccharomyces pombe|ch... 60 3e-10
SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase Snf22... 48 6e-07
SPAC1250.01 |snf21|SPAC29A4.21|ATP-dependent DNA helicase Snf21|... 44 1e-05
SPBC1734.15 |rsc4|brd1|RSC complex subunit Rsc4|Schizosaccharomy... 42 4e-05
SPBC4B4.03 |rsc1||RSC complex subunit Rsc1 |Schizosaccharomyces ... 41 1e-04
SPBC21D10.10 |||bromodomain protein|Schizosaccharomyces pombe|ch... 39 4e-04
SPAC24H6.13 |||DUF221 family protein|Schizosaccharomyces pombe|c... 29 0.56
SPBC1718.05 |trs31||TRAPP complex subunit Trs31 |Schizosaccharom... 25 5.2
SPAC22A12.10 |||diacylglycerol cholinephosphotranferase/ diacylg... 25 6.8
SPAC30C2.08 |||conserved fungal protein|Schizosaccharomyces pomb... 25 6.8
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 25 6.8
SPBC29A3.04 |rpl8||60S ribosomal protein L7a |Schizosaccharomyce... 25 9.0
>SPAC631.02 |||bromodomain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 727
Score = 115 bits (276), Expect = 5e-27
Identities = 51/113 (45%), Positives = 71/113 (62%)
Frame = -2
Query: 511 KEKLSDALKSCNEILKELFSKKHSGYAWPFYKPVDAELLGLHDYFDIIKKPMDLGTVKNK 332
+ K + +K C +LKEL K+H YA+PFYKPV+ G DYF +IK PMDLGT++NK
Sbjct: 387 RRKDAAEMKFCQSVLKELLKKQHEAYAYPFYKPVNPTACGCPDYFKVIKHPMDLGTMQNK 446
Query: 331 MDGRAYKSAAEFAADVRLIFTNCYKYNPPDHDVVAMARKLQDVFEMRYAKIPD 173
++ Y S F AD+ L+F NCYK+N V M +KL+ +F+ +A PD
Sbjct: 447 LNHNEYASMKAFEADMVLMFKNCYKFNSAGTPVHLMGKKLESIFQKLWANKPD 499
Score = 73.7 bits (173), Expect = 1e-14
Identities = 36/97 (37%), Positives = 53/97 (54%)
Frame = -2
Query: 427 PFYKPVDAELLGLHDYFDIIKKPMDLGTVKNKMDGRAYKSAAEFAADVRLIFTNCYKYNP 248
PF PVD + DY IIK P+DLGT++ K Y SA F D+ L+F+NC+ YN
Sbjct: 253 PFRAPVDPVKQNIPDYPTIIKNPIDLGTMQKKFSSGVYSSAQHFIDDMNLMFSNCFLYNG 312
Query: 247 PDHDVVAMARKLQDVFEMRYAKIPDEPVHVAAHAEKG 137
+ V M + LQ FE + ++P +V +++ G
Sbjct: 313 TESPVGVMGKNLQATFERQLKQLPS--AYVTSYSRPG 347
>SPCC1450.02 ||SPCC191.13|bromodomain protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 578
Score = 110 bits (265), Expect = 1e-25
Identities = 44/112 (39%), Positives = 75/112 (66%)
Frame = -2
Query: 511 KEKLSDALKSCNEILKELFSKKHSGYAWPFYKPVDAELLGLHDYFDIIKKPMDLGTVKNK 332
+ K + ++ C+ +LKEL+ +++ +A+PFY+PVD DYFD+IK+PMDL T+++K
Sbjct: 250 RRKNNSQMRFCSTVLKELYKRQYESFAFPFYQPVDPVACDCPDYFDVIKEPMDLSTIQSK 309
Query: 331 MDGRAYKSAAEFAADVRLIFTNCYKYNPPDHDVVAMARKLQDVFEMRYAKIP 176
++ Y + EF +D+ L+F NC+ YNPP V M R+L++VF+ ++ P
Sbjct: 310 LNKNEYSTLEEFESDILLMFNNCFTYNPPGTPVHVMGRQLENVFKEKWEARP 361
Score = 84.2 bits (199), Expect = 1e-17
Identities = 44/116 (37%), Positives = 65/116 (56%)
Frame = -2
Query: 487 KSCNEILKELFSKKHSGYAWPFYKPVDAELLGLHDYFDIIKKPMDLGTVKNKMDGRAYKS 308
K C I+++L K+S PF PVD + DY I+K PMDLGT++ K+ Y
Sbjct: 91 KYCLAIVRQLKRTKNSA---PFKVPVDPIKQNIPDYPTIVKNPMDLGTIEKKLTSYEYSV 147
Query: 307 AAEFAADVRLIFTNCYKYNPPDHDVVAMARKLQDVFEMRYAKIPDEPVHVAAHAEK 140
EF D+ L+F+NC+ YN + V +M + LQ+VFE + ++PD AA +K
Sbjct: 148 PQEFIDDMNLMFSNCFLYNGTESPVGSMGKALQEVFERQLKQLPDAEQPAAAPVKK 203
>SPAC1952.05 |gcn5||histone acetyltransferase
Gcn5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 454
Score = 64.9 bits (151), Expect = 7e-12
Identities = 31/95 (32%), Positives = 55/95 (57%), Gaps = 1/95 (1%)
Frame = -2
Query: 472 ILKELFSK-KHSGYAWPFYKPVDAELLGLHDYFDIIKKPMDLGTVKNKMDGRAYKSAAEF 296
+L+ LF++ ++ +WPF +PV E + DY+++I+ PMDL T++ ++ Y+S EF
Sbjct: 351 VLEMLFTEMQNHPSSWPFMQPVSKE--DVPDYYEVIEHPMDLSTMEFRLRNNQYESVEEF 408
Query: 295 AADVRLIFTNCYKYNPPDHDVVAMARKLQDVFEMR 191
D + IF NC YN + A +L+ F+ +
Sbjct: 409 IRDAKYIFDNCRSYNDSNTTYYKNADRLEKFFQKK 443
>SPBC25H2.11c |||bromodomain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 979
Score = 59.7 bits (138), Expect = 3e-10
Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Frame = -2
Query: 385 DYFDIIKKPMDLGTVKNKMDGRAYKSAAEFAADVRLIFTNCYKYNP-PDHDVVAMARKLQ 209
DY+ +IK+PMDLGT+ + Y S EF D+ LI++NC+ YN PDH + A+ ++
Sbjct: 335 DYYTVIKEPMDLGTILRNLKNLHYNSKKEFVHDLMLIWSNCFLYNSHPDHPLRVHAQFMK 394
Query: 208 DVFEMRYAKIPD 173
D IPD
Sbjct: 395 DKSLELINLIPD 406
>SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase
Snf22|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1680
Score = 48.4 bits (110), Expect = 6e-07
Identities = 23/60 (38%), Positives = 32/60 (53%)
Frame = -2
Query: 385 DYFDIIKKPMDLGTVKNKMDGRAYKSAAEFAADVRLIFTNCYKYNPPDHDVVAMARKLQD 206
DY+ IIK+P+ LG +K + Y E AD L+F N Y YN +H +V KL +
Sbjct: 1555 DYYIIIKRPIALGKIKRNIKNDRYGDVGELIADFMLMFNNAYTYN-EEHSIVYEDAKLME 1613
>SPAC1250.01 |snf21|SPAC29A4.21|ATP-dependent DNA helicase
Snf21|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1199
Score = 44.0 bits (99), Expect = 1e-05
Identities = 20/72 (27%), Positives = 36/72 (50%)
Frame = -2
Query: 385 DYFDIIKKPMDLGTVKNKMDGRAYKSAAEFAADVRLIFTNCYKYNPPDHDVVAMARKLQD 206
DY+ IIK P+ L ++ ++G YK+ +D+ +F N YN V A K+Q
Sbjct: 1103 DYYMIIKSPIALDAIRKHINGTFYKTLEAMKSDLMTMFNNARTYNEEGSFVYEDANKMQT 1162
Query: 205 VFEMRYAKIPDE 170
E + ++ ++
Sbjct: 1163 AMETKIEELEED 1174
>SPBC1734.15 |rsc4|brd1|RSC complex subunit Rsc4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 542
Score = 42.3 bits (95), Expect = 4e-05
Identities = 20/73 (27%), Positives = 33/73 (45%)
Frame = -2
Query: 385 DYFDIIKKPMDLGTVKNKMDGRAYKSAAEFAADVRLIFTNCYKYNPPDHDVVAMARKLQD 206
DY++IIK PM + ++ + Y + F D+ +F N YN P V A KL
Sbjct: 181 DYYEIIKSPMTIKMLEKRFKKGEYTTLESFVKDLNQMFINAKTYNAPGSFVYEDAEKLSQ 240
Query: 205 VFEMRYAKIPDEP 167
+ + ++P
Sbjct: 241 LSSSLISSFSEQP 253
Score = 40.7 bits (91), Expect = 1e-04
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = -2
Query: 385 DYFDIIKKPMDLGTVKNKMDGRAYKSAAEFAADVRLIFTNCYKYNPP 245
DY+ II+KP+ ++NK Y S +F D+RL+ +N YN P
Sbjct: 48 DYYQIIQKPICYKMMRNKAKTGKYLSMGDFYDDIRLMVSNAQTYNMP 94
>SPBC4B4.03 |rsc1||RSC complex subunit Rsc1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 803
Score = 40.7 bits (91), Expect = 1e-04
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Frame = -2
Query: 385 DYFDIIKKPMDLGTVKNKMDGRAYKSAAEFAADVRLIFTNCYKYNPPD----HDVVAMAR 218
+Y+ I++PM L ++ K+ Y++ +F D L+F N +N P D +
Sbjct: 248 EYYQAIEQPMALEVIQKKLSKHRYETIEQFVDDFNLMFDNAKSFNDPSSQVYRDADFLKN 307
Query: 217 KLQDVFEMRYAKIPDE 170
L DV + K+ E
Sbjct: 308 YLADVLRLEAGKLDSE 323
Score = 26.6 bits (56), Expect = 2.2
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = -2
Query: 364 KPMDLGTVKNKMDGRAYKSAAEFAADVRLIFTN 266
+P L ++++K+D Y +EF +D+ +F N
Sbjct: 57 RPTTLKSIQSKIDEFQYHDFSEFVSDLAYLFIN 89
>SPBC21D10.10 |||bromodomain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 299
Score = 39.1 bits (87), Expect = 4e-04
Identities = 27/93 (29%), Positives = 40/93 (43%)
Frame = -2
Query: 520 AKGKEKLSDALKSCNEILKELFSKKHSGYAWPFYKPVDAELLGLHDYFDIIKKPMDLGTV 341
A E+ K + +L L + + + PF PV+ + DY ++ KP DL T+
Sbjct: 178 ALSNEEKQSLKKFQSAMLPMLDNISNHRFGAPFSHPVNRK--EAPDYDSLVYKPQDLRTL 235
Query: 340 KNKMDGRAYKSAAEFAADVRLIFTNCYKYNPPD 242
KN + E +V IF NC YN D
Sbjct: 236 KNMIKEGNITEVDELYREVLRIFANCKMYNGSD 268
>SPAC24H6.13 |||DUF221 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 871
Score = 28.7 bits (61), Expect = 0.56
Identities = 14/24 (58%), Positives = 15/24 (62%)
Frame = -2
Query: 370 IKKPMDLGTVKNKMDGRAYKSAAE 299
IK PMDLGT + K GRAY E
Sbjct: 698 IKYPMDLGTSEMKNVGRAYPEILE 721
>SPBC1718.05 |trs31||TRAPP complex subunit Trs31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 209
Score = 25.4 bits (53), Expect = 5.2
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -3
Query: 147 QKKEALHQVQNLDQSPIQNQMIQKKKETIRLRC 49
+ KEA + +D +P+ N+ I KE +L C
Sbjct: 124 KSKEASDEYMIVDNNPLLNKFISVPKEMNQLNC 156
>SPAC22A12.10 |||diacylglycerol cholinephosphotranferase/
diacylglycerol ethanolaminesphotranferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 386
Score = 25.0 bits (52), Expect = 6.8
Identities = 11/37 (29%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Frame = +2
Query: 416 FIKWPGIARVFLR-EKFFKN-FITAFECIRQFLFSFS 520
F++W + ++ + FF++ F+T F C+ F+F++S
Sbjct: 264 FLQWMAVFSLYAKYPAFFEHHFLTIF-CLNAFIFAYS 299
>SPAC30C2.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 457
Score = 25.0 bits (52), Expect = 6.8
Identities = 8/25 (32%), Positives = 18/25 (72%)
Frame = -2
Query: 517 KGKEKLSDALKSCNEILKELFSKKH 443
+G+E ++ L C+++++EL +KH
Sbjct: 416 EGQELVNSLLTQCHQLIEELRDEKH 440
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 25.0 bits (52), Expect = 6.8
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +2
Query: 419 IKWPGIARVFLREKFFKNFITAFECIRQFLFSFS 520
+ W FL+ F+ F T+F+ IR F ++ S
Sbjct: 1697 LHWISSLEPFLKATLFQLFSTSFQQIRDFYYNKS 1730
>SPBC29A3.04 |rpl8||60S ribosomal protein L7a |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 259
Score = 24.6 bits (51), Expect = 9.0
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +2
Query: 407 INRFIKWPGIARVFLREKFFKNFITAFECIRQF 505
++RF+KWP R+ R K + I QF
Sbjct: 46 LSRFVKWPEYIRLQRRRKILNLRLKVPPAIAQF 78
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,921,194
Number of Sequences: 5004
Number of extensions: 35257
Number of successful extensions: 125
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 120
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 125
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 212331630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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