Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS302D09f
(521 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_9343| Best HMM Match : No HMM Matches (HMM E-Value=.) 161 2e-40
SB_30003| Best HMM Match : DUF906 (HMM E-Value=0) 78 5e-15
SB_49662| Best HMM Match : Bromodomain (HMM E-Value=9.8e-38) 75 3e-14
SB_4331| Best HMM Match : Bromodomain (HMM E-Value=3.30006e-41) 66 1e-11
SB_2262| Best HMM Match : No HMM Matches (HMM E-Value=.) 65 3e-11
SB_48561| Best HMM Match : AAA (HMM E-Value=0) 60 1e-09
SB_32425| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 2e-09
SB_34678| Best HMM Match : Bromodomain (HMM E-Value=9e-25) 59 3e-09
SB_11346| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 8e-09
SB_56834| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 3e-07
SB_55405| Best HMM Match : Bromodomain (HMM E-Value=5.5e-16) 48 4e-06
SB_12182| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 6e-06
SB_737| Best HMM Match : 7tm_1 (HMM E-Value=1.9e-35) 47 8e-06
SB_10642| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 6e-05
SB_49136| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 1e-04
SB_17956| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 1e-04
SB_11349| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_32718| Best HMM Match : Bromodomain (HMM E-Value=0.069) 39 0.003
SB_54984| Best HMM Match : Bromodomain (HMM E-Value=4.1) 35 0.035
SB_9857| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.047
SB_4196| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.14
SB_25249| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.14
SB_21258| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.25
SB_41944| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.33
SB_53067| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.58
SB_4509| Best HMM Match : Brix (HMM E-Value=4.4) 31 0.76
SB_17235| Best HMM Match : DUF1004 (HMM E-Value=5.4) 31 0.76
SB_56322| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_52733| Best HMM Match : DUF948 (HMM E-Value=0.37) 29 3.1
SB_58672| Best HMM Match : PHD (HMM E-Value=3e-18) 29 3.1
SB_36078| Best HMM Match : F5_F8_type_C (HMM E-Value=2.1e-27) 28 4.1
SB_50496| Best HMM Match : FHA (HMM E-Value=7.8e-07) 28 4.1
SB_39590| Best HMM Match : PHD (HMM E-Value=2.2e-18) 28 5.4
SB_25556| Best HMM Match : rve (HMM E-Value=2.8e-17) 27 7.1
SB_5145| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_37708| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
>SB_9343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 161 bits (392), Expect = 2e-40
Identities = 75/149 (50%), Positives = 102/149 (68%), Gaps = 3/149 (2%)
Frame = -2
Query: 442 SGYAWPFYKPVDAELLGLHDYFDIIKKPMDLGTVKNKMDGRAYKSAAEFAADVRLIFTNC 263
+ YAWPFYKPVDAE LGLHDY DIIK+PMD+ +KNK++ RAY S +EFAAD+RL+F+NC
Sbjct: 335 TAYAWPFYKPVDAEALGLHDYHDIIKQPMDMTEIKNKLENRAYDSPSEFAADIRLMFSNC 394
Query: 262 YKYNPPDHDVVAMARKLQDVFEMRYAKIPDEPVHVAAH---AEKGXXXXXXXXXXXXXXX 92
Y+YNPPDHDVV MAR+LQDVFEM++AK+P+E + A+
Sbjct: 395 YRYNPPDHDVVKMARQLQDVFEMKFAKMPEETIIAPPSPPPAQPEVEPEQQESSDEETSV 454
Query: 91 XXXXXXERNNKVKMLEKELLALQEKMRKL 5
ER K+ L+++L+++ E++ KL
Sbjct: 455 SNDSEAERAEKLSQLQQQLISVHEQLSKL 483
Score = 99.5 bits (237), Expect = 1e-21
Identities = 47/101 (46%), Positives = 60/101 (59%)
Frame = -2
Query: 472 ILKELFSKKHSGYAWPFYKPVDAELLGLHDYFDIIKKPMDLGTVKNKMDGRAYKSAAEFA 293
+LK L+ H AWPF +PVDA L L DY IIKKPMDLGT+K K++ Y A E
Sbjct: 123 VLKGLWRHHH---AWPFREPVDAVKLNLPDYHTIIKKPMDLGTIKKKLENNEYPCAQECI 179
Query: 292 ADVRLIFTNCYKYNPPDHDVVAMARKLQDVFEMRYAKIPDE 170
D RL+ NCY YN P D+V M + + +F + A +P E
Sbjct: 180 EDFRLMINNCYTYNKPGDDIVLMCQSMDKLFHQKIAMMPPE 220
>SB_30003| Best HMM Match : DUF906 (HMM E-Value=0)
Length = 2276
Score = 77.8 bits (183), Expect = 5e-15
Identities = 36/77 (46%), Positives = 47/77 (61%)
Frame = -2
Query: 427 PFYKPVDAELLGLHDYFDIIKKPMDLGTVKNKMDGRAYKSAAEFAADVRLIFTNCYKYNP 248
PF PVD +LLG DYF+I++ PMDL T+K K+D YK+ E+ DV L+F N + YN
Sbjct: 904 PFRSPVDPKLLGCLDYFEIVRNPMDLSTIKRKLDNGQYKNPWEYCDDVWLMFDNAWLYNR 963
Query: 247 PDHDVVAMARKLQDVFE 197
V KL +VFE
Sbjct: 964 KTSRVYKYCTKLSEVFE 980
>SB_49662| Best HMM Match : Bromodomain (HMM E-Value=9.8e-38)
Length = 1301
Score = 75.4 bits (177), Expect = 3e-14
Identities = 36/92 (39%), Positives = 52/92 (56%)
Frame = -2
Query: 457 FSKKHSGYAWPFYKPVDAELLGLHDYFDIIKKPMDLGTVKNKMDGRAYKSAAEFAADVRL 278
+ KKH+ AWPF +PVD Y +II+ PMDL T++ K+D Y + EF +D++L
Sbjct: 366 YLKKHNN-AWPFLEPVDESYAP--QYHEIIENPMDLSTIEEKLDTSKYATLDEFQSDMKL 422
Query: 277 IFTNCYKYNPPDHDVVAMARKLQDVFEMRYAK 182
+F NC +YN PD M L+ F + K
Sbjct: 423 MFENCLEYNGPDSMYTKMGNTLEAAFNRQIKK 454
>SB_4331| Best HMM Match : Bromodomain (HMM E-Value=3.30006e-41)
Length = 305
Score = 66.5 bits (155), Expect = 1e-11
Identities = 36/91 (39%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Frame = -2
Query: 469 LKELFSK-KHSGYAWPFYKPVDAELLGLHDYFDIIKKPMDLGTVKNKMDGRAYKSAAEFA 293
LK + ++ K+ AWPF KPV E DY++ IK PMDL T+ ++ Y S F
Sbjct: 208 LKNILTQVKNHASAWPFQKPV--ERAEAPDYYEHIKYPMDLKTMTERLKSGYYSSKKLFV 265
Query: 292 ADVRLIFTNCYKYNPPDHDVVAMARKLQDVF 200
AD+R IF NC YN PD + A ++ F
Sbjct: 266 ADMRRIFQNCRTYNSPDTEYYKCANTVERFF 296
>SB_2262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 688
Score = 65.3 bits (152), Expect = 3e-11
Identities = 35/101 (34%), Positives = 53/101 (52%)
Frame = -2
Query: 442 SGYAWPFYKPVDAELLGLHDYFDIIKKPMDLGTVKNKMDGRAYKSAAEFAADVRLIFTNC 263
S +W F +PVD Y+ +I+ PMD GTVK+K++ Y + F D+ L+ NC
Sbjct: 563 SAASW-FLRPVDPN--DAPGYYKVIRTPMDFGTVKHKLESGVYDDYSAFHDDMMLVKNNC 619
Query: 262 YKYNPPDHDVVAMARKLQDVFEMRYAKIPDEPVHVAAHAEK 140
+ YNP HDV ++ +E+ YAK+ + V A K
Sbjct: 620 FCYNPQGHDVRNDCDEVFRFYEIEYAKMLERWEKVQLKASK 660
>SB_48561| Best HMM Match : AAA (HMM E-Value=0)
Length = 2021
Score = 59.7 bits (138), Expect = 1e-09
Identities = 29/63 (46%), Positives = 39/63 (61%)
Frame = -2
Query: 424 FYKPVDAELLGLHDYFDIIKKPMDLGTVKNKMDGRAYKSAAEFAADVRLIFTNCYKYNPP 245
F KPVD E + DY D+I++PMDL T+ K+D Y + A + D+ LI +N KYN P
Sbjct: 1452 FSKPVDLE--EVEDYLDVIQEPMDLSTMMEKIDRHQYSTCANYLLDIDLITSNALKYN-P 1508
Query: 244 DHD 236
D D
Sbjct: 1509 DRD 1511
>SB_32425| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 770
Score = 59.3 bits (137), Expect = 2e-09
Identities = 31/74 (41%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Frame = -2
Query: 424 FYKPVDA-ELLGLHDYFDIIKKPMDLGTVKNKMDGRAYKSAAEFAADVRLIFTNCYKYNP 248
F PVD E+L DY D+IK+PMD T+++++D Y + +F AD LI NC YN
Sbjct: 625 FSDPVDTNEVL---DYLDVIKQPMDFSTMRSRIDSNFYHTIEQFEADFNLIIENCMAYNA 681
Query: 247 PDHDVVAMARKLQD 206
D A KL+D
Sbjct: 682 QDTIYYRAALKLRD 695
>SB_34678| Best HMM Match : Bromodomain (HMM E-Value=9e-25)
Length = 1137
Score = 58.8 bits (136), Expect = 3e-09
Identities = 25/74 (33%), Positives = 45/74 (60%)
Frame = -2
Query: 433 AWPFYKPVDAELLGLHDYFDIIKKPMDLGTVKNKMDGRAYKSAAEFAADVRLIFTNCYKY 254
+WPF+KPV+++ + DY+++IK PMD+ T++ + +S EF +V+L+ TN Y
Sbjct: 816 SWPFHKPVNSKQVP--DYYEVIKNPMDIETLRQHVQDGMCRSREEFLENVKLLHTNSVLY 873
Query: 253 NPPDHDVVAMARKL 212
N +H+ A +
Sbjct: 874 NGENHEFTKTANSI 887
Score = 34.3 bits (75), Expect = 0.062
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = -2
Query: 433 AWPFYKPVDAELLGLHDYFDIIKKPMDLGTVKNK 332
+WPF+ PV+ + + DY I+K P+DL T++ K
Sbjct: 764 SWPFHTPVNPKTVP--DYHKIVKNPIDLQTLREK 795
>SB_11346| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1706
Score = 57.2 bits (132), Expect = 8e-09
Identities = 25/66 (37%), Positives = 37/66 (56%)
Frame = -2
Query: 505 KLSDALKSCNEILKELFSKKHSGYAWPFYKPVDAELLGLHDYFDIIKKPMDLGTVKNKMD 326
K+S ++ + EL S + WPF +PVDA+ LGL+DY + IK+PM T+ K
Sbjct: 52 KMSQEMQQAYRVYVELLSDSYRNITWPFLEPVDAQSLGLYDYHERIKEPMCFTTIGQKFH 111
Query: 325 GRAYKS 308
+ Y S
Sbjct: 112 EKVYTS 117
>SB_56834| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 552
Score = 52.0 bits (119), Expect = 3e-07
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Frame = -2
Query: 433 AWPFYKPVDAELLGLHDYFDIIKKPMDLGTVKNKMDGRAYKSAAEFAADVRLIFTNCYKY 254
A PF PV+ L DY D +++PMD TV K Y + +D+RL+F+N Y
Sbjct: 110 AEPFLAPVN--LADFPDYTDYVEQPMDFSTVWRKFVENQYSDPEQLVSDIRLVFSNSRAY 167
Query: 253 N-PPDHDVVAMARKLQDVFEMRYAKI 179
N P + +M +L +FE R I
Sbjct: 168 NTQPRSRIYSMTIRLAAMFEDRVDSI 193
>SB_55405| Best HMM Match : Bromodomain (HMM E-Value=5.5e-16)
Length = 657
Score = 48.4 bits (110), Expect = 4e-06
Identities = 30/80 (37%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Frame = -2
Query: 481 CNEILKELFSKKHSGYAWPFYKPVDAELLGLHDYFDIIKKPMDLGTVKNKMDGRA---YK 311
C +IL ELF HS + PF + V + +Y+ +I PMDL T++ K+ + Y
Sbjct: 499 CEKILLELFC--HSD-SIPFQQKVSKSV---PNYYKVITHPMDLSTIRAKIQPQHFQHYS 552
Query: 310 SAAEFAADVRLIFTNCYKYN 251
S EF +D +LIF+NC +N
Sbjct: 553 SITEFLSDCQLIFSNCATFN 572
>SB_12182| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1361
Score = 47.6 bits (108), Expect = 6e-06
Identities = 20/63 (31%), Positives = 34/63 (53%)
Frame = -2
Query: 385 DYFDIIKKPMDLGTVKNKMDGRAYKSAAEFAADVRLIFTNCYKYNPPDHDVVAMARKLQD 206
+Y+D+I P+DL ++ ++ Y+ F AD+ L+ N KY PD A +L+
Sbjct: 56 EYYDVISTPIDLLKIQQRLKTDEYEDVGTFTADMELLLDNALKYYKPDSQEYQDATQLKQ 115
Query: 205 VFE 197
VF+
Sbjct: 116 VFD 118
Score = 40.7 bits (91), Expect = 7e-04
Identities = 18/69 (26%), Positives = 35/69 (50%)
Frame = -2
Query: 385 DYFDIIKKPMDLGTVKNKMDGRAYKSAAEFAADVRLIFTNCYKYNPPDHDVVAMARKLQD 206
DY+++IKKP+ L +++++ Y S ++ L F N YN P+ + A ++ D
Sbjct: 370 DYYEVIKKPIALMKIRSQIKSGLYDSLEALETELELCFNNAKTYNEPNSMLYKDAERMLD 429
Query: 205 VFEMRYAKI 179
+ +I
Sbjct: 430 HMSKKKTEI 438
>SB_737| Best HMM Match : 7tm_1 (HMM E-Value=1.9e-35)
Length = 432
Score = 47.2 bits (107), Expect = 8e-06
Identities = 20/45 (44%), Positives = 26/45 (57%)
Frame = -2
Query: 385 DYFDIIKKPMDLGTVKNKMDGRAYKSAAEFAADVRLIFTNCYKYN 251
+Y+ I PMDL VK K+ Y S EF D+ LIF+NC +N
Sbjct: 3 EYYKQIANPMDLSIVKEKLHSYQYHSVVEFVRDMNLIFSNCKDFN 47
>SB_10642| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1023
Score = 44.4 bits (100), Expect = 6e-05
Identities = 21/79 (26%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Frame = -2
Query: 391 LHDYFDIIKKPMDLGTVKNKMDGRAYKSAAEFAADVRLIFTNCYKYNPPDHDVVAMARKL 212
L DY+ IIK+P+D+ ++ +++ Y+ + D L+ N YN + + KL
Sbjct: 885 LPDYYQIIKQPVDIRKIRERINSHKYRCLEDLDEDFTLMCRNAQTYNMEGSIIFDDSIKL 944
Query: 211 QDVFEMRYAKIPD-EPVHV 158
Q +F+ +K+ E +H+
Sbjct: 945 QSLFDHAMSKVKSGEELHI 963
>SB_49136| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1459
Score = 43.2 bits (97), Expect = 1e-04
Identities = 30/79 (37%), Positives = 44/79 (55%)
Frame = -2
Query: 511 KEKLSDALKSCNEILKELFSKKHSGYAWPFYKPVDAELLGLHDYFDIIKKPMDLGTVKNK 332
+++ S + C IL E+ +KH AWPF PV+A+ +Y+ II+KPMD T+K K
Sbjct: 1290 RKQQSKDMAPCRTILAEM--EKHDD-AWPFLIPVNAKQFP--EYYKIIRKPMDFHTMKIK 1344
Query: 331 MDGRAYKSAAEFAADVRLI 275
+ R Y+ E V LI
Sbjct: 1345 L--RDYQYLTENGRWVPLI 1361
>SB_17956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1449
Score = 43.2 bits (97), Expect = 1e-04
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = -2
Query: 382 YFDIIKKPMDLGTVKNKMDGRAYKSAAEFAADVRLIFTNCYKYNPPDHDVVAMARKLQDV 203
Y +I PMD T+K K+D +Y + F D L+ N YN PD A+++ +
Sbjct: 1286 YSRVITHPMDFSTIKTKIDSNSYTTIEAFRDDFYLMCNNAMVYNAPDTIYFKAAKRIMQI 1345
>SB_11349| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 42.7 bits (96), Expect = 2e-04
Identities = 19/40 (47%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Frame = -2
Query: 358 MDLGTVKNKMDGRAYKSAAEFAADVRLIFTNC--YKYNPP 245
MDLGT+K+ + Y+ A F VRL+F NC Y +NPP
Sbjct: 1 MDLGTIKDNLTLMRYEEAEAFVQHVRLVFINCDKYNHNPP 40
>SB_32718| Best HMM Match : Bromodomain (HMM E-Value=0.069)
Length = 42
Score = 38.7 bits (86), Expect = 0.003
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = -2
Query: 352 LGTVKNKMDGRAYKSAAEFAADVRLIFTNCYKYNPPDHDV 233
+ +++K++G Y++ +F AD L+F N KYN PD V
Sbjct: 1 MAKIQSKLNGDQYQTLDDFMADFHLMFDNACKYNEPDSQV 40
>SB_54984| Best HMM Match : Bromodomain (HMM E-Value=4.1)
Length = 99
Score = 35.1 bits (77), Expect = 0.035
Identities = 20/68 (29%), Positives = 35/68 (51%)
Frame = -2
Query: 517 KGKEKLSDALKSCNEILKELFSKKHSGYAWPFYKPVDAELLGLHDYFDIIKKPMDLGTVK 338
+G+++++ + C + L EL A PF PVD + DY+ ++ P+DL T+
Sbjct: 39 EGRDEMTSRIMGCVDRLCEL------SLAGPFVYPVDVQ--AYPDYWSVVPYPIDLHTII 90
Query: 337 NKMDGRAY 314
K+ R Y
Sbjct: 91 EKLGNRFY 98
>SB_9857| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1125
Score = 34.7 bits (76), Expect = 0.047
Identities = 15/60 (25%), Positives = 29/60 (48%)
Frame = -2
Query: 385 DYFDIIKKPMDLGTVKNKMDGRAYKSAAEFAADVRLIFTNCYKYNPPDHDVVAMARKLQD 206
DY + KP+DL ++ + + YK+A +F + I N Y D ++ +A + +
Sbjct: 540 DYLQFVIKPVDLSLLEKNVRKKHYKTAKQFREHAQWILHNAIIYFGEDRELTELAEAIME 599
>SB_4196| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 474
Score = 33.1 bits (72), Expect = 0.14
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Frame = -2
Query: 361 PMDLGTVKNKMDGRA--YKSAAEFAADVRLIFTNCYKYNPPDHDVVAMARKLQDVFEMRY 188
P+DL + D R+ K+ + +R I NCYKY+ + D++ + + V + +Y
Sbjct: 212 PVDLPWQNVRSDCRSEEQKAKVSWTNALRQIVKNCYKYHGRE-DLLPLFAENDAVQQHQY 270
Query: 187 AKIPDEPVHVAAHAE 143
A P + VH ++A+
Sbjct: 271 AHHPQQMVHTISNAD 285
>SB_25249| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 443
Score = 33.1 bits (72), Expect = 0.14
Identities = 20/72 (27%), Positives = 30/72 (41%)
Frame = -3
Query: 231 LRWLVNYKTFLK*DMQRFLMSLFMLRHMQKKEALHQVQNLDQSPIQNQMIQKKKETIRLR 52
L+WL+ + + R + F LR K A+ L + N+ + +K T
Sbjct: 7 LKWLLGVNRYCSSNACRAELGRFPLRTKAKCRAIKLWLKLSNNNGNNEKLSRKAFTTISN 66
Query: 51 CSKKNFWHCKRK 16
KNFWH K K
Sbjct: 67 YENKNFWHRKIK 78
>SB_21258| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 461
Score = 32.3 bits (70), Expect = 0.25
Identities = 19/72 (26%), Positives = 29/72 (40%)
Frame = -3
Query: 231 LRWLVNYKTFLK*DMQRFLMSLFMLRHMQKKEALHQVQNLDQSPIQNQMIQKKKETIRLR 52
L+WL+ + + R + F LR K A+ L + N+ + +K
Sbjct: 328 LKWLLGVNRYCSSNACRAELGRFPLRTKAKCRAIKLWLKLSNNNGNNEKLSRKASAAISN 387
Query: 51 CSKKNFWHCKRK 16
KNFWH K K
Sbjct: 388 YENKNFWHRKIK 399
>SB_41944| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 698
Score = 31.9 bits (69), Expect = 0.33
Identities = 19/72 (26%), Positives = 29/72 (40%)
Frame = -3
Query: 231 LRWLVNYKTFLK*DMQRFLMSLFMLRHMQKKEALHQVQNLDQSPIQNQMIQKKKETIRLR 52
L+WL+ + + R + F LR K A+ L + N+ + +K
Sbjct: 204 LKWLLGVNRYCSSNACRAELGRFPLRRKAKCRAIKLWLKLSNNNGNNEKLSRKAFATISN 263
Query: 51 CSKKNFWHCKRK 16
KNFWH K K
Sbjct: 264 YENKNFWHRKIK 275
>SB_53067| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 668
Score = 31.1 bits (67), Expect = 0.58
Identities = 20/72 (27%), Positives = 29/72 (40%)
Frame = -3
Query: 231 LRWLVNYKTFLK*DMQRFLMSLFMLRHMQKKEALHQVQNLDQSPIQNQMIQKKKETIRLR 52
L+WL+ K + R + F LR K A+ L + N+ + +K
Sbjct: 22 LKWLLGVKRCCSSNACRAELGRFPLRTKAKCRAIKLWLKLSNNNGNNEKLSRKAFATISN 81
Query: 51 CSKKNFWHCKRK 16
KNFWH K K
Sbjct: 82 YENKNFWHRKIK 93
>SB_4509| Best HMM Match : Brix (HMM E-Value=4.4)
Length = 288
Score = 30.7 bits (66), Expect = 0.76
Identities = 19/72 (26%), Positives = 28/72 (38%)
Frame = -3
Query: 231 LRWLVNYKTFLK*DMQRFLMSLFMLRHMQKKEALHQVQNLDQSPIQNQMIQKKKETIRLR 52
L+WL+ + + R + F LR K A+ L N+ + +K
Sbjct: 191 LKWLLGVNRYCSSNACRAELGRFPLRTKAKCRAIKLWLKLSNKNGNNEKLSRKAFAAISN 250
Query: 51 CSKKNFWHCKRK 16
KNFWH K K
Sbjct: 251 YENKNFWHRKIK 262
>SB_17235| Best HMM Match : DUF1004 (HMM E-Value=5.4)
Length = 215
Score = 30.7 bits (66), Expect = 0.76
Identities = 19/72 (26%), Positives = 29/72 (40%)
Frame = -3
Query: 231 LRWLVNYKTFLK*DMQRFLMSLFMLRHMQKKEALHQVQNLDQSPIQNQMIQKKKETIRLR 52
L+WL+ + + R + F LR K A+ L + N+ + +K
Sbjct: 52 LKWLLGVNRYCSSNACRAELGRFPLRTKAKWRAIKLWLKLSNNNGNNENLSRKAFATISN 111
Query: 51 CSKKNFWHCKRK 16
KNFWH K K
Sbjct: 112 YENKNFWHRKIK 123
>SB_56322| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 29.5 bits (63), Expect = 1.8
Identities = 18/72 (25%), Positives = 28/72 (38%)
Frame = -3
Query: 231 LRWLVNYKTFLK*DMQRFLMSLFMLRHMQKKEALHQVQNLDQSPIQNQMIQKKKETIRLR 52
L+WL+ + + R + F LR K A+ + N+ + +K
Sbjct: 151 LKWLLGVNRYCSSNACRAELGRFPLRTKAKCRAIKLWLKFSNNNGNNEKLSRKAFATISN 210
Query: 51 CSKKNFWHCKRK 16
KNFWH K K
Sbjct: 211 YENKNFWHRKIK 222
>SB_52733| Best HMM Match : DUF948 (HMM E-Value=0.37)
Length = 1147
Score = 28.7 bits (61), Expect = 3.1
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = -2
Query: 514 GKEKLSDALKSCNEILKELFSKKHSGYAWPFYKPVDAELLGLHDYFDIIK 365
G K S A+KS ILK F++ + A Y P + L DY +IK
Sbjct: 760 GTAKASTAVKSLANILKSSFNQSRNPDAMMRYIPKGVSVCTLVDYDYVIK 809
>SB_58672| Best HMM Match : PHD (HMM E-Value=3e-18)
Length = 458
Score = 28.7 bits (61), Expect = 3.1
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = -2
Query: 361 PMDLGTVKNKMDGRAYKSAAEFAADVRLIFTNCYKYNPPDHDVVAMARKLQDVFEMRYAK 182
P DL V+ K+ AY+ +F D+ LI K + +V A L +VF ++Y
Sbjct: 357 PKDLDAVRAKVKENAYRVVGDFCHDMLLILNKVCKIT-GNQPLVRNAAVLYEVF-IKYRA 414
Query: 181 IP 176
P
Sbjct: 415 AP 416
>SB_36078| Best HMM Match : F5_F8_type_C (HMM E-Value=2.1e-27)
Length = 611
Score = 28.3 bits (60), Expect = 4.1
Identities = 18/72 (25%), Positives = 30/72 (41%)
Frame = -3
Query: 231 LRWLVNYKTFLK*DMQRFLMSLFMLRHMQKKEALHQVQNLDQSPIQNQMIQKKKETIRLR 52
L+WL+ + + R + + + QK A+ L + N+ + +K
Sbjct: 158 LKWLLGVNRYCSSNACRAELGHSLSK--QKCRAIKLWLKLSNNNGNNEKLSRKAFATISN 215
Query: 51 CSKKNFWHCKRK 16
C KNFWH K K
Sbjct: 216 CENKNFWHRKIK 227
>SB_50496| Best HMM Match : FHA (HMM E-Value=7.8e-07)
Length = 766
Score = 28.3 bits (60), Expect = 4.1
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = -3
Query: 147 QKKEALHQVQNLDQSPIQNQMIQKKKETIRLRCSKKNFWHCKRK*GNSS 1
++KE L ++ +S + Q+ KKE I L +++F+ K K NSS
Sbjct: 482 KEKEELEHIERKIRSLERKQLSYLKKEDIELAGEERDFYEEKSKSRNSS 530
>SB_39590| Best HMM Match : PHD (HMM E-Value=2.2e-18)
Length = 1284
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = -2
Query: 361 PMDLGTVKNKMDGRAYKSAAEFAADVRLIFTNCYKYNPPDH 239
P DL V+ K+ AY+ +F D+ LI K +H
Sbjct: 1016 PKDLDAVRAKVKENAYRVVGDFCHDMLLILNKVCKIRVTNH 1056
>SB_25556| Best HMM Match : rve (HMM E-Value=2.8e-17)
Length = 735
Score = 27.5 bits (58), Expect = 7.1
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = -2
Query: 490 LKSCNEILKELFSKKHSGYAWPFYKPVDAELLGLHDY 380
LKSC E+ L K++ +W F + + E + L Y
Sbjct: 298 LKSCEELYLGLCEKENIAPSWRFLRECETECVSLPHY 334
>SB_5145| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 556
Score = 27.5 bits (58), Expect = 7.1
Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Frame = -3
Query: 324 EELTXXXXXXXQMFVLYLQTVT----STTRQTMMLLRWLVNYKTFLK*DMQRFLMSLFML 157
EEL +F+L L+ ++ S R ++++L LV FL + +L S +
Sbjct: 167 EELLEAKEMRDDLFLLVLKVLSRACKSAARSSLLILLNLVQKSRFLTVHLSAYLNSHWGK 226
Query: 156 RHMQKKEALHQVQN 115
HM+ + L +QN
Sbjct: 227 SHMEWEGVLEALQN 240
>SB_37708| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1926
Score = 27.1 bits (57), Expect = 9.4
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -3
Query: 459 FSLRNTLAMPGHFINLLMLNYLGYMTILISSRSLWISV 346
F+L + +P H +NLL+ +LG + S W SV
Sbjct: 1128 FTLMTKMKLPAHILNLLLTAFLG--NLPTGSGFAWTSV 1163
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,022,867
Number of Sequences: 59808
Number of extensions: 262794
Number of successful extensions: 670
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 635
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 666
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1172759136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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