Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS302D09f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    27   0.50 
AF042732-3|AAC18058.1|  496|Anopheles gambiae diphenol oxidase-A...    23   8.2  

>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 26.6 bits (56), Expect = 0.50
 Identities = 14/61 (22%), Positives = 28/61 (45%)
 Frame = -2

Query: 322 RAYKSAAEFAADVRLIFTNCYKYNPPDHDVVAMARKLQDVFEMRYAKIPDEPVHVAAHAE 143
           R  +   ++ A  RLIF +  KYN P   ++          ++ Y +I  + +  AA++ 
Sbjct: 22  RRREGKTDYYARKRLIFQDKNKYNTPKFRLIVRLSNRDITCQIAYRRIEGDRIVCAAYSH 81

Query: 142 K 140
           +
Sbjct: 82  E 82


>AF042732-3|AAC18058.1|  496|Anopheles gambiae diphenol oxidase-A2
           protein.
          Length = 496

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -3

Query: 468 LKNFSLRNTLAMPGHFINLLMLNYLGY 388
           L+  +LRN        IN L+ NYL Y
Sbjct: 198 LRTATLRNDFEGQAVLINCLLRNYLHY 224


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 484,334
Number of Sequences: 2352
Number of extensions: 8876
Number of successful extensions: 66
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 66
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)