Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS302D07f
(521 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC13B11.03c |||hydroxyacylglutathione hydrolase |Schizosacchar... 116 3e-27
SPAC824.07 |||hydroxyacylglutathione hydrolase |Schizosaccharomy... 113 2e-26
SPAC4F10.08 |mug126||sequence orphan|Schizosaccharomyces pombe|c... 27 1.7
SPBC16G5.15c |fkh2||fork head transcription factor Fkh2 |Schizos... 26 3.0
SPAC22A12.07c |ogm1|oma1|protein O-mannosyltransferase Ogm1|Schi... 26 3.9
SPCC613.10 |qcr2||ubiquinol-cytochrome-c reductase complex core ... 25 5.2
SPAC30D11.09 |cwf19||complexed with Cdc5 protein Cwf19 |Schizosa... 25 5.2
SPAC4G9.09c |arg11||N-acetyl-gamma-glutamyl-phosphate reductase/... 25 5.2
SPBC428.02c |eca39|SPBC582.12c|branched chain amino acid aminotr... 25 5.2
SPCC1393.05 |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 25 5.2
SPBC11G11.07 ||SPBC18H10.01|karyopherin|Schizosaccharomyces pomb... 25 6.8
SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3 |Schizosacc... 25 6.8
SPBC16A3.17c |||membrane transporter|Schizosaccharomyces pombe|c... 25 9.0
SPBC3E7.09 |||Sad1-UNC-like C-terminal|Schizosaccharomyces pombe... 25 9.0
>SPCC13B11.03c |||hydroxyacylglutathione hydrolase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 256
Score = 116 bits (278), Expect = 3e-27
Identities = 63/140 (45%), Positives = 88/140 (62%), Gaps = 1/140 (0%)
Frame = -3
Query: 513 ICYFVTAPEEGNDSVVFTGDTLFLGGCGRFFEGTADQMYKALITILSSLPDHTKVFCGHE 334
IC++ N+ VFTGDTLF GCGRFFEGTA +M+ AL +LSSLP++T ++ GHE
Sbjct: 123 ICFYA---HSSNEHAVFTGDTLFNAGCGRFFEGTAAEMHIALNAVLSSLPNNTVIYPGHE 179
Query: 333 YTLQNLKFAA-HVEPTNENVKAKISWSQDRRNQGKPTVPSTIGEEKLYNPFMRVTELAVQ 157
YT N+KFA+ H++ N + + ++ G T+G+EK +NPFMRVT+ +Q
Sbjct: 180 YTKSNVKFASKHLQSEALNHLEGLC-NHNQFIAGH----ITMGQEKQFNPFMRVTDPELQ 234
Query: 156 NHTGKNDPIDTMKAIRLEKD 97
H G NDPI M +R K+
Sbjct: 235 KHLGLNDPIKVMDELRTLKN 254
>SPAC824.07 |||hydroxyacylglutathione hydrolase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 256
Score = 113 bits (271), Expect = 2e-26
Identities = 62/135 (45%), Positives = 82/135 (60%)
Frame = -3
Query: 513 ICYFVTAPEEGNDSVVFTGDTLFLGGCGRFFEGTADQMYKALITILSSLPDHTKVFCGHE 334
ICY+V++P + VFTGDTLF GCGRFFEG A QM AL +L++LPD T + GHE
Sbjct: 123 ICYYVSSPSK---RAVFTGDTLFTSGCGRFFEGDAKQMDYALNHVLAALPDDTVTYPGHE 179
Query: 333 YTLQNLKFAAHVEPTNENVKAKISWSQDRRNQGKPTVPSTIGEEKLYNPFMRVTELAVQN 154
YT N KF++ + T E K + + +N T TIG+EK +NPFM + +VQ
Sbjct: 180 YTKSNAKFSSTIFSTPELTKL-VDFC---KNHESTTGHFTIGDEKKFNPFMCLGLESVQK 235
Query: 153 HTGKNDPIDTMKAIR 109
G +DPI MK +R
Sbjct: 236 AVGSSDPITVMKKLR 250
>SPAC4F10.08 |mug126||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 436
Score = 27.1 bits (57), Expect = 1.7
Identities = 20/63 (31%), Positives = 25/63 (39%)
Frame = -3
Query: 408 DQMYKALITILSSLPDHTKVFCGHEYTLQNLKFAAHVEPTNENVKAKISWSQDRRNQGKP 229
D Y+A IT S D K E LQN +E EN +A +Q G+
Sbjct: 146 DSQYEAFITQGESQTDKKKTSTVQEEELQNA--GKKLETVQENPQAYSKVTQQEPQAGQK 203
Query: 228 TVP 220
VP
Sbjct: 204 AVP 206
>SPBC16G5.15c |fkh2||fork head transcription factor Fkh2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 26.2 bits (55), Expect = 3.0
Identities = 16/70 (22%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
Frame = -3
Query: 297 EPTNENVKAKISWSQDRRNQGKPTVPSTIGEEKLYNPFMRVTELAVQNHTGKND-PIDTM 121
EP + A+ ++ G P+ T EEK + T A+ + +D +D
Sbjct: 354 EPASSTTSARDQTPSTPKDVGSPSTAETSAEEKQMETYKTPTHAALSDIISTHDYALDAN 413
Query: 120 KAIRLEKDTF 91
A + +K F
Sbjct: 414 SASQTKKAAF 423
>SPAC22A12.07c |ogm1|oma1|protein O-mannosyltransferase
Ogm1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 893
Score = 25.8 bits (54), Expect = 3.9
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = -3
Query: 429 RFFEGTADQMYKALITILSSLPDH 358
RF + AD Y +L+TI +++P+H
Sbjct: 305 RFDDQFADVAYGSLVTIRNAIPEH 328
>SPCC613.10 |qcr2||ubiquinol-cytochrome-c reductase complex core
protein Qcr2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 426
Score = 25.4 bits (53), Expect = 5.2
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = -3
Query: 441 GGCGRFFEGTADQMYKALITILSSLPD 361
G C + + TA + +KAL ++ S++P+
Sbjct: 318 GSCPKAIKATASESFKALKSLSSNIPN 344
>SPAC30D11.09 |cwf19||complexed with Cdc5 protein Cwf19
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 639
Score = 25.4 bits (53), Expect = 5.2
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -3
Query: 288 NENVKAKISWSQDRRNQGKPTVPSTIGEEKLYN 190
+EN ++ + +RN PT+ + EEKL N
Sbjct: 315 SENSNSQATIPSKKRNFDDPTIDEMVQEEKLLN 347
>SPAC4G9.09c |arg11||N-acetyl-gamma-glutamyl-phosphate
reductase/acetylglutamate kinase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 885
Score = 25.4 bits (53), Expect = 5.2
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = -3
Query: 453 TLFLGGCGRFFEGTADQMYKALITILSSLPDHTKVFCGHEYTLQNL 316
+LFL G RFF A + K L + SS P + YT +NL
Sbjct: 542 SLFLKGGKRFFSAEAQKTQKPLKAV-SSKPAKVVLLGARGYTGKNL 586
>SPBC428.02c |eca39|SPBC582.12c|branched chain amino acid
aminotransferase Eca39|Schizosaccharomyces pombe|chr
2|||Manual
Length = 380
Score = 25.4 bits (53), Expect = 5.2
Identities = 15/57 (26%), Positives = 24/57 (42%)
Frame = +2
Query: 254 CDQLILALTFSLVGST*AANFKFCKVYSWPQNTLVWSGRLLRIVINALYI*SAVPSK 424
CD +L + S VG ++ FK K+ ++ W G + Y S +P K
Sbjct: 166 CDNAMLYVIASPVGPYYSSGFKAVKLCCSEESVRAWPGGTGHYKLGGNYAPSVLPQK 222
>SPCC1393.05 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 956
Score = 25.4 bits (53), Expect = 5.2
Identities = 8/16 (50%), Positives = 14/16 (87%)
Frame = +2
Query: 326 KVYSWPQNTLVWSGRL 373
KVY +P+ TLV++G++
Sbjct: 236 KVYEYPEETLVYAGKI 251
>SPBC11G11.07 ||SPBC18H10.01|karyopherin|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 955
Score = 25.0 bits (52), Expect = 6.8
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -3
Query: 444 LGGCGRFFEGTADQMYKALITILSSLPDHTKV 349
L GR DQ+ +L IL LP++ KV
Sbjct: 456 LRAIGRMVPANEDQVIGSLFQILPQLPENNKV 487
>SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 732
Score = 25.0 bits (52), Expect = 6.8
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 3/31 (9%)
Frame = +3
Query: 372 CSELLLMLCTFDLPCLQRTCHI---RLRRVY 455
C+E + C LPC R CH+ RLR +Y
Sbjct: 84 CAEGITYSCV--LPCNHRMCHVCALRLRALY 112
>SPBC16A3.17c |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 599
Score = 24.6 bits (51), Expect = 9.0
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3
Query: 18 YKNKDQYMLQKCNSFFYL 71
+KN+ L C+SFFYL
Sbjct: 353 FKNRSSAALLACSSFFYL 370
>SPBC3E7.09 |||Sad1-UNC-like C-terminal|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 659
Score = 24.6 bits (51), Expect = 9.0
Identities = 8/13 (61%), Positives = 12/13 (92%)
Frame = +3
Query: 21 KNKDQYMLQKCNS 59
+NKD+YML KC++
Sbjct: 220 ENKDKYMLNKCSA 232
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,233,862
Number of Sequences: 5004
Number of extensions: 44959
Number of successful extensions: 104
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 100
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 102
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 212331630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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