Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS302D07f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061337-1|AAL28885.1|  305|Drosophila melanogaster LD26447p pro...   204   6e-53
AE014296-3422|AAG22178.1|  271|Drosophila melanogaster CG4365-PB...   204   6e-53
AE014296-3421|AAF51642.2|  305|Drosophila melanogaster CG4365-PA...   204   6e-53
AE014296-3420|AAN12145.1|  348|Drosophila melanogaster CG4365-PC...   204   6e-53
BT012447-1|AAS93718.1|  279|Drosophila melanogaster RE65881p pro...    44   2e-04
BT003193-1|AAO24948.1|  279|Drosophila melanogaster RE56416p pro...    44   2e-04
AE013599-1302|AAF58646.2|  279|Drosophila melanogaster CG30022-P...    44   2e-04

>AY061337-1|AAL28885.1|  305|Drosophila melanogaster LD26447p
           protein.
          Length = 305

 Score =  204 bits (498), Expect = 6e-53
 Identities = 93/145 (64%), Positives = 109/145 (75%), Gaps = 1/145 (0%)
 Frame = -3

Query: 519 GHICYFVTAPEEGNDSVVFTGDTLFLGGCGRFFEGTADQMYKALITILSSLPDHTKVFCG 340
           GHICY +TA +   +  VFTGDTLF GGCGRFFEGT ++MY+AL T LS+LPD TKVFCG
Sbjct: 160 GHICYHITAQQGSGEGAVFTGDTLFQGGCGRFFEGTPEEMYEALCTKLSALPDATKVFCG 219

Query: 339 HEYTLQNLKFAAHVEPTNENVKAKISWSQDRRNQGKPTVPSTIGEEKLYNPFMRVTELAV 160
           HEYTLQN+ FA HVEP NE ++ +I W++ RR    PTVPSTIGEEK +NPFMRV E  V
Sbjct: 220 HEYTLQNMSFARHVEPDNEVIQQRIEWAKHRRASQDPTVPSTIGEEKSWNPFMRVHEATV 279

Query: 159 QNHT-GKNDPIDTMKAIRLEKDTFK 88
           Q H  G  DP+ TM  +R EKDTFK
Sbjct: 280 QKHAGGATDPVVTMGKLRKEKDTFK 304


>AE014296-3422|AAG22178.1|  271|Drosophila melanogaster CG4365-PB,
           isoform B protein.
          Length = 271

 Score =  204 bits (498), Expect = 6e-53
 Identities = 93/145 (64%), Positives = 109/145 (75%), Gaps = 1/145 (0%)
 Frame = -3

Query: 519 GHICYFVTAPEEGNDSVVFTGDTLFLGGCGRFFEGTADQMYKALITILSSLPDHTKVFCG 340
           GHICY +TA +   +  VFTGDTLF GGCGRFFEGT ++MY+AL T LS+LPD TKVFCG
Sbjct: 126 GHICYHITAQQGSGEGAVFTGDTLFQGGCGRFFEGTPEEMYEALCTKLSALPDATKVFCG 185

Query: 339 HEYTLQNLKFAAHVEPTNENVKAKISWSQDRRNQGKPTVPSTIGEEKLYNPFMRVTELAV 160
           HEYTLQN+ FA HVEP NE ++ +I W++ RR    PTVPSTIGEEK +NPFMRV E  V
Sbjct: 186 HEYTLQNMSFARHVEPDNEVIQQRIEWAKHRRASQDPTVPSTIGEEKSWNPFMRVHEATV 245

Query: 159 QNHT-GKNDPIDTMKAIRLEKDTFK 88
           Q H  G  DP+ TM  +R EKDTFK
Sbjct: 246 QKHAGGATDPVVTMGKLRKEKDTFK 270


>AE014296-3421|AAF51642.2|  305|Drosophila melanogaster CG4365-PA,
           isoform A protein.
          Length = 305

 Score =  204 bits (498), Expect = 6e-53
 Identities = 93/145 (64%), Positives = 109/145 (75%), Gaps = 1/145 (0%)
 Frame = -3

Query: 519 GHICYFVTAPEEGNDSVVFTGDTLFLGGCGRFFEGTADQMYKALITILSSLPDHTKVFCG 340
           GHICY +TA +   +  VFTGDTLF GGCGRFFEGT ++MY+AL T LS+LPD TKVFCG
Sbjct: 160 GHICYHITAQQGSGEGAVFTGDTLFQGGCGRFFEGTPEEMYEALCTKLSALPDATKVFCG 219

Query: 339 HEYTLQNLKFAAHVEPTNENVKAKISWSQDRRNQGKPTVPSTIGEEKLYNPFMRVTELAV 160
           HEYTLQN+ FA HVEP NE ++ +I W++ RR    PTVPSTIGEEK +NPFMRV E  V
Sbjct: 220 HEYTLQNMSFARHVEPDNEVIQQRIEWAKHRRASQDPTVPSTIGEEKSWNPFMRVHEATV 279

Query: 159 QNHT-GKNDPIDTMKAIRLEKDTFK 88
           Q H  G  DP+ TM  +R EKDTFK
Sbjct: 280 QKHAGGATDPVVTMGKLRKEKDTFK 304


>AE014296-3420|AAN12145.1|  348|Drosophila melanogaster CG4365-PC,
           isoform C protein.
          Length = 348

 Score =  204 bits (498), Expect = 6e-53
 Identities = 93/145 (64%), Positives = 109/145 (75%), Gaps = 1/145 (0%)
 Frame = -3

Query: 519 GHICYFVTAPEEGNDSVVFTGDTLFLGGCGRFFEGTADQMYKALITILSSLPDHTKVFCG 340
           GHICY +TA +   +  VFTGDTLF GGCGRFFEGT ++MY+AL T LS+LPD TKVFCG
Sbjct: 203 GHICYHITAQQGSGEGAVFTGDTLFQGGCGRFFEGTPEEMYEALCTKLSALPDATKVFCG 262

Query: 339 HEYTLQNLKFAAHVEPTNENVKAKISWSQDRRNQGKPTVPSTIGEEKLYNPFMRVTELAV 160
           HEYTLQN+ FA HVEP NE ++ +I W++ RR    PTVPSTIGEEK +NPFMRV E  V
Sbjct: 263 HEYTLQNMSFARHVEPDNEVIQQRIEWAKHRRASQDPTVPSTIGEEKSWNPFMRVHEATV 322

Query: 159 QNHT-GKNDPIDTMKAIRLEKDTFK 88
           Q H  G  DP+ TM  +R EKDTFK
Sbjct: 323 QKHAGGATDPVVTMGKLRKEKDTFK 347


>BT012447-1|AAS93718.1|  279|Drosophila melanogaster RE65881p
           protein.
          Length = 279

 Score = 43.6 bits (98), Expect = 2e-04
 Identities = 19/48 (39%), Positives = 32/48 (66%), Gaps = 2/48 (4%)
 Frame = -3

Query: 468 VFTGDTLFLGGCGR--FFEGTADQMYKALITILSSLPDHTKVFCGHEY 331
           VFTGDTL + GCGR  F EG    +Y+ + + + +LP++ +++  H+Y
Sbjct: 174 VFTGDTLLIRGCGRTDFQEGCPRNLYENVHSKIFTLPENFRIYPAHDY 221


>BT003193-1|AAO24948.1|  279|Drosophila melanogaster RE56416p
           protein.
          Length = 279

 Score = 43.6 bits (98), Expect = 2e-04
 Identities = 19/48 (39%), Positives = 32/48 (66%), Gaps = 2/48 (4%)
 Frame = -3

Query: 468 VFTGDTLFLGGCGR--FFEGTADQMYKALITILSSLPDHTKVFCGHEY 331
           VFTGDTL + GCGR  F EG    +Y+ + + + +LP++ +++  H+Y
Sbjct: 174 VFTGDTLLIRGCGRTDFQEGCPRNLYENVHSKIFTLPENFRIYPAHDY 221


>AE013599-1302|AAF58646.2|  279|Drosophila melanogaster CG30022-PA
           protein.
          Length = 279

 Score = 43.6 bits (98), Expect = 2e-04
 Identities = 19/48 (39%), Positives = 32/48 (66%), Gaps = 2/48 (4%)
 Frame = -3

Query: 468 VFTGDTLFLGGCGR--FFEGTADQMYKALITILSSLPDHTKVFCGHEY 331
           VFTGDTL + GCGR  F EG    +Y+ + + + +LP++ +++  H+Y
Sbjct: 174 VFTGDTLLIRGCGRTDFQEGCPRNLYENVHSKIFTLPENFRIYPAHDY 221


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,404,743
Number of Sequences: 53049
Number of extensions: 477300
Number of successful extensions: 947
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 918
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 940
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)