Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS302D07f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL023828-5|CAA19450.1| 260|Caenorhabditis elegans Hypothetical ... 156 8e-39
Z68493-5|CAA92800.1| 237|Caenorhabditis elegans Hypothetical pr... 35 0.031
AL034393-4|CAA22310.1| 158|Caenorhabditis elegans Hypothetical ... 30 0.87
U64849-8|AAC48047.2| 376|Caenorhabditis elegans Hypothetical pr... 29 2.0
AF003148-8|AAB54211.2| 346|Caenorhabditis elegans Hypothetical ... 28 3.5
AC024881-4|AAK71412.2| 314|Caenorhabditis elegans Serpentine re... 28 4.7
Z81526-6|CAB04263.1| 2144|Caenorhabditis elegans Hypothetical pr... 27 8.1
U41028-1|AAA82354.1| 532|Caenorhabditis elegans Hypothetical pr... 27 8.1
>AL023828-5|CAA19450.1| 260|Caenorhabditis elegans Hypothetical
protein Y17G7B.3 protein.
Length = 260
Score = 156 bits (379), Expect = 8e-39
Identities = 80/146 (54%), Positives = 95/146 (65%), Gaps = 3/146 (2%)
Frame = -3
Query: 519 GHICYFVTAPEEGNDS--VVFTGDTLFLGGCGRFFEGTADQMYKALITILSSLPDHTKVF 346
GHICY +T P + S VVFTGDTLF+ GCGRFFEGTA QM AL IL +LP T++F
Sbjct: 115 GHICYHITNPAADSTSPGVVFTGDTLFIAGCGRFFEGTAPQMDVALNEILKNLPVETQIF 174
Query: 345 CGHEYTLQNLKFAAHVEPTNENVKAKISWSQDRRNQGKPTVPSTIGEEKLYNPFMRVTEL 166
GHEYT+ NLKFA HVEP NE K+ W+Q + QG TVPST+ EEK NPFMRV E
Sbjct: 175 PGHEYTVANLKFACHVEPGNEKAAQKLEWAQRQIEQGGFTVPSTVAEEKATNPFMRVRES 234
Query: 165 -AVQNHTGKNDPIDTMKAIRLEKDTF 91
+Q G D + M +R K+ F
Sbjct: 235 EEIQKSIGTCDAVVGMAKLREMKNKF 260
>Z68493-5|CAA92800.1| 237|Caenorhabditis elegans Hypothetical
protein C33A12.7 protein.
Length = 237
Score = 35.1 bits (77), Expect = 0.031
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = -3
Query: 465 FTGDTLFLGGCGR--FFEGTADQMYKALITILSSLPDHTKVFCGHEY 331
FTGD L + CGR F +G ++ ++ + +LP+ V+ GH Y
Sbjct: 137 FTGDALLIRACGRTDFQQGNPASLFDSVHDKIFTLPEDYVVYVGHNY 183
>AL034393-4|CAA22310.1| 158|Caenorhabditis elegans Hypothetical
protein Y18D10A.4 protein.
Length = 158
Score = 30.3 bits (65), Expect = 0.87
Identities = 15/63 (23%), Positives = 32/63 (50%)
Frame = +2
Query: 215 VEGTVGFPWFRLSCDQLILALTFSLVGST*AANFKFCKVYSWPQNTLVWSGRLLRIVINA 394
++G++G+ +F L C L L L+ + V +T ++ K + + +WS + V+
Sbjct: 46 IDGSIGYHFFSLDCLSLSLTLSTAAVVATATSSSSSPKAFGVSVSLFLWSLLVAWYVVGV 105
Query: 395 LYI 403
L +
Sbjct: 106 LLV 108
>U64849-8|AAC48047.2| 376|Caenorhabditis elegans Hypothetical
protein K04A8.1 protein.
Length = 376
Score = 29.1 bits (62), Expect = 2.0
Identities = 28/107 (26%), Positives = 43/107 (40%), Gaps = 3/107 (2%)
Frame = -3
Query: 369 LPDHTKVFCGHEYTLQNLKFAAHVEPTNENVKAKISWSQDRRNQGKPTVPSTIGE---EK 199
LPD EY ++ + ++ NENV K + R PTV I E E+
Sbjct: 50 LPDPFPAVNLKEYKIKTYRGYVSMDELNENVFKKFGYEITRPTYPVPTV-RMINEPTCEE 108
Query: 198 LYNPFMRVTELAVQNHTGKNDPIDTMKAIRLEKDTFK*ISFYINKKN 58
++ + +++E K P + M L T +YIN KN
Sbjct: 109 VFFAWQKISEQPQPKFPPKTIPAERMNEFLLYNYTAL-SDWYINDKN 154
>AF003148-8|AAB54211.2| 346|Caenorhabditis elegans Hypothetical
protein F32B5.3 protein.
Length = 346
Score = 28.3 bits (60), Expect = 3.5
Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 6/99 (6%)
Frame = -3
Query: 336 EYTLQNLKFAAHVEPTNENVKAKISWSQDRRNQGKPTVPSTIGE--EKLYNPFMRVTELA 163
+Y ++ K +E NENV K + R PT+ T + +++ + R+ +L
Sbjct: 45 DYKVKTHKGYVSMEELNENVFQKFGYEIIRPTYPVPTLKMTHEPTCDNVFSEWKRIFKL- 103
Query: 162 VQNHTGKNDPIDTMKAIRLEKDTFK*I----SFYINKKN 58
+ P+DT+ A RLE+ T SFY N KN
Sbjct: 104 ----PQPDIPVDTIPADRLEEFTLYNYTALGSFYKNDKN 138
>AC024881-4|AAK71412.2| 314|Caenorhabditis elegans Serpentine
receptor, class sx protein5 protein.
Length = 314
Score = 27.9 bits (59), Expect = 4.7
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +1
Query: 331 VLMATKHFSVVRQAAQNCY*CFVHLICRAFKEP 429
VL ATK+ + + C CF H+IC F+ P
Sbjct: 34 VLTATKNKLKSKSSYLQCALCFSHIICLLFELP 66
>Z81526-6|CAB04263.1| 2144|Caenorhabditis elegans Hypothetical protein
F33H2.5 protein.
Length = 2144
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = -3
Query: 423 FEGTADQMYKALITILSSL-PDHTKVFCGHEYTLQNLK 313
+E ++A++ + S + PDH GH+ TL+NLK
Sbjct: 1376 YESEVPTSFRAVLQLGSIVRPDHGISLGGHQLTLENLK 1413
>U41028-1|AAA82354.1| 532|Caenorhabditis elegans Hypothetical
protein C25G6.3 protein.
Length = 532
Score = 27.1 bits (57), Expect = 8.1
Identities = 18/56 (32%), Positives = 25/56 (44%)
Frame = -3
Query: 363 DHTKVFCGHEYTLQNLKFAAHVEPTNENVKAKISWSQDRRNQGKPTVPSTIGEEKL 196
D V CGH +K AH+E E K K W Q + G+ + IG ++L
Sbjct: 429 DKQLVNCGHSIDDVKIKVIAHMETDKEMAKGK--WGQVILS-GRQLLKEYIGNKEL 481
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,360,219
Number of Sequences: 27780
Number of extensions: 255410
Number of successful extensions: 555
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 542
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 553
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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