Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS302D03f
(521 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g38920.1 68417.m05515 vacuolar ATP synthase 16 kDa proteolipi... 195 1e-50
At4g34720.1 68417.m04928 vacuolar ATP synthase 16 kDa proteolipi... 195 1e-50
At2g16510.1 68415.m01893 vacuolar ATP synthase 16 kDa proteolipi... 195 1e-50
At1g75630.1 68414.m08787 vacuolar ATP synthase 16 kDa proteolipi... 195 1e-50
At1g19910.1 68414.m02496 vacuolar ATP synthase 16 kDa proteolipi... 195 1e-50
At4g32530.1 68417.m04631 vacuolar ATP synthase, putative / V-ATP... 84 5e-17
At2g25610.1 68415.m03068 H+-transporting two-sector ATPase, C su... 84 5e-17
At1g80480.1 68414.m09427 PRLI-interacting factor L, putative sim... 32 0.20
At5g56330.1 68418.m07031 carbonic anhydrase family protein conta... 31 0.36
At4g16980.1 68417.m02560 arabinogalactan-protein family similar ... 30 0.82
At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid t... 30 1.1
At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam ... 29 1.4
At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam ... 29 1.4
At4g33970.1 68417.m04820 leucine-rich repeat family protein / ex... 29 1.9
At2g41190.1 68415.m05087 amino acid transporter family protein l... 29 1.9
At1g26150.1 68414.m03192 protein kinase family protein similar t... 29 2.5
At5g42720.1 68418.m05203 glycosyl hydrolase family 17 protein si... 28 4.4
At4g36550.1 68417.m05190 U-box domain-containing protein low sim... 28 4.4
At3g04570.1 68416.m00485 DNA-binding protein-related contains Pf... 28 4.4
At5g38030.1 68418.m04581 MATE efflux family protein similar to r... 27 5.8
At5g19380.1 68418.m02309 expressed protein 27 5.8
At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid t... 27 5.8
At2g29050.1 68415.m03531 rhomboid family protein contains PFAM d... 27 5.8
At2g17820.1 68415.m02064 histidine kinase 1 99% identical to GP:... 27 5.8
At3g26590.1 68416.m03319 MATE efflux family protein similar to r... 27 7.7
>At4g38920.1 68417.m05515 vacuolar ATP synthase 16 kDa proteolipid
subunit 3 / V-ATPase 16 kDa proteolipid subunit 3
(AVAP3) (AVA-P3) identical to SP|P59227 Vacuolar ATP
synthase 16 kDa proteolipid subunit 1/3/5 (EC 3.6.3.14)
(V-ATPase 16 kDa proteolipid subunit 1/3/5) {Arabidopsis
thaliana}; contains Pfam profile PF00137: ATP synthase
subunit C
Length = 164
Score = 195 bits (476), Expect = 1e-50
Identities = 91/138 (65%), Positives = 114/138 (82%), Gaps = 1/138 (0%)
Frame = +2
Query: 92 PFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLV 271
PFFG +GAA+A++FS +GAAYGTAKSG G+A+M VMRPEL+MKSI+PVVMAG++ IYGL+
Sbjct: 11 PFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLI 70
Query: 272 VAVLIAGALQEPA-NYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLF 448
+AV+I+ + A +Y L+ G+ HL +GLA G +GL+AG AIGIVGDAGVR AQQP+LF
Sbjct: 71 IAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLF 130
Query: 449 VGMILILIXAEVXGLYGL 502
VGMILILI AE LYGL
Sbjct: 131 VGMILILIFAEALALYGL 148
Score = 31.5 bits (68), Expect = 0.36
Identities = 18/70 (25%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = +2
Query: 86 YGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAM--SVMRPELIMKSIIPVVMAGIIAI 259
Y F G +S + G + G A G A + + +P+L + I+ ++ A +A+
Sbjct: 86 YYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALAL 145
Query: 260 YGLVVAVLIA 289
YGL+V ++++
Sbjct: 146 YGLIVGIILS 155
>At4g34720.1 68417.m04928 vacuolar ATP synthase 16 kDa proteolipid
subunit 1 / V-ATPase 16 kDa proteolipid subunit 1
(AVAP1) (AVA-P1) identical to SP|P59227 Vacuolar ATP
synthase 16 kDa proteolipid subunit 1/3/5 (EC 3.6.3.14)
(V-ATPase 16 kDa proteolipid subunit 1/3/5) {Arabidopsis
thaliana}; contains Pfam profile PF00137: ATP synthase
subunit C
Length = 164
Score = 195 bits (476), Expect = 1e-50
Identities = 91/138 (65%), Positives = 114/138 (82%), Gaps = 1/138 (0%)
Frame = +2
Query: 92 PFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLV 271
PFFG +GAA+A++FS +GAAYGTAKSG G+A+M VMRPEL+MKSI+PVVMAG++ IYGL+
Sbjct: 11 PFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLI 70
Query: 272 VAVLIAGALQEPA-NYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLF 448
+AV+I+ + A +Y L+ G+ HL +GLA G +GL+AG AIGIVGDAGVR AQQP+LF
Sbjct: 71 IAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLF 130
Query: 449 VGMILILIXAEVXGLYGL 502
VGMILILI AE LYGL
Sbjct: 131 VGMILILIFAEALALYGL 148
Score = 31.5 bits (68), Expect = 0.36
Identities = 18/70 (25%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = +2
Query: 86 YGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAM--SVMRPELIMKSIIPVVMAGIIAI 259
Y F G +S + G + G A G A + + +P+L + I+ ++ A +A+
Sbjct: 86 YYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALAL 145
Query: 260 YGLVVAVLIA 289
YGL+V ++++
Sbjct: 146 YGLIVGIILS 155
>At2g16510.1 68415.m01893 vacuolar ATP synthase 16 kDa proteolipid
subunit 5 / V-ATPase 16 kDa proteolipid subunit 5
(AVAP5) identical to SP|P59227 Vacuolar ATP synthase 16
kDa proteolipid subunit 1/3/5 (EC 3.6.3.14) (V-ATPase 16
kDa proteolipid subunit 1/3/5) {Arabidopsis thaliana}
GI:926929; contains Pfam profile PF00137: ATP synthase
subunit C
Length = 164
Score = 195 bits (476), Expect = 1e-50
Identities = 91/138 (65%), Positives = 114/138 (82%), Gaps = 1/138 (0%)
Frame = +2
Query: 92 PFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLV 271
PFFG +GAA+A++FS +GAAYGTAKSG G+A+M VMRPEL+MKSI+PVVMAG++ IYGL+
Sbjct: 11 PFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLI 70
Query: 272 VAVLIAGALQEPA-NYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLF 448
+AV+I+ + A +Y L+ G+ HL +GLA G +GL+AG AIGIVGDAGVR AQQP+LF
Sbjct: 71 IAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLF 130
Query: 449 VGMILILIXAEVXGLYGL 502
VGMILILI AE LYGL
Sbjct: 131 VGMILILIFAEALALYGL 148
Score = 31.5 bits (68), Expect = 0.36
Identities = 18/70 (25%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = +2
Query: 86 YGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAM--SVMRPELIMKSIIPVVMAGIIAI 259
Y F G +S + G + G A G A + + +P+L + I+ ++ A +A+
Sbjct: 86 YYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALAL 145
Query: 260 YGLVVAVLIA 289
YGL+V ++++
Sbjct: 146 YGLIVGIILS 155
>At1g75630.1 68414.m08787 vacuolar ATP synthase 16 kDa proteolipid
subunit 4 / V-ATPase 16 kDa proteolipid subunit 4
(AVAP4) (AVA-P4) identical to SP|P59229 Vacuolar ATP
synthase 16 kDa proteolipid subunit 4 (EC 3.6.3.14)
(V-ATPase 16 kDa proteolipid subunit 4) {Arabidopsis
thaliana}; contains Pfam profile PF00137: ATP synthase
subunit C
Length = 166
Score = 195 bits (476), Expect = 1e-50
Identities = 91/138 (65%), Positives = 114/138 (82%), Gaps = 1/138 (0%)
Frame = +2
Query: 92 PFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLV 271
PFFG +GAA+A++FS +GAAYGTAKSG G+A+M VMRPEL+MKSI+PVVMAG++ IYGL+
Sbjct: 13 PFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLI 72
Query: 272 VAVLIAGALQEPA-NYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLF 448
+AV+I+ + A +Y L+ G+ HL +GLA G +GL+AG AIGIVGDAGVR AQQP+LF
Sbjct: 73 IAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLF 132
Query: 449 VGMILILIXAEVXGLYGL 502
VGMILILI AE LYGL
Sbjct: 133 VGMILILIFAEALALYGL 150
Score = 31.5 bits (68), Expect = 0.36
Identities = 18/70 (25%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = +2
Query: 86 YGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAM--SVMRPELIMKSIIPVVMAGIIAI 259
Y F G +S + G + G A G A + + +P+L + I+ ++ A +A+
Sbjct: 88 YYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALAL 147
Query: 260 YGLVVAVLIA 289
YGL+V ++++
Sbjct: 148 YGLIVGIILS 157
>At1g19910.1 68414.m02496 vacuolar ATP synthase 16 kDa proteolipid
subunit 2 / V-ATPase 16 kDa proteolipid subunit 2
(AVAP2) (AVA-P2) identical to SP|Q39039 Vacuolar ATP
synthase 16 kDa proteolipid subunit 2 (EC 3.6.3.14)
(V-ATPase 16 kDa proteolipid subunit 2 {Arabidopsis
thaliana}, nearly identical to vacuolar H+-ATPase
proteolipid (16 kDa) subunit GI:755147 from [Gossypium
hirsutum]
Length = 165
Score = 195 bits (476), Expect = 1e-50
Identities = 91/138 (65%), Positives = 114/138 (82%), Gaps = 1/138 (0%)
Frame = +2
Query: 92 PFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLV 271
PFFG +GAA+A++FS +GAAYGTAKSG G+A+M VMRPEL+MKSI+PVVMAG++ IYGL+
Sbjct: 12 PFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLI 71
Query: 272 VAVLIAGALQEPA-NYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLF 448
+AV+I+ + A +Y L+ G+ HL +GLA G +GL+AG AIGIVGDAGVR AQQP+LF
Sbjct: 72 IAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLF 131
Query: 449 VGMILILIXAEVXGLYGL 502
VGMILILI AE LYGL
Sbjct: 132 VGMILILIFAEALALYGL 149
Score = 31.5 bits (68), Expect = 0.36
Identities = 18/70 (25%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = +2
Query: 86 YGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAM--SVMRPELIMKSIIPVVMAGIIAI 259
Y F G +S + G + G A G A + + +P+L + I+ ++ A +A+
Sbjct: 87 YYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALAL 146
Query: 260 YGLVVAVLIA 289
YGL+V ++++
Sbjct: 147 YGLIVGIILS 156
>At4g32530.1 68417.m04631 vacuolar ATP synthase, putative /
V-ATPase, putative SP|P23968 Vacuolar ATP synthase 22
kDa proteolipid subunit (EC 3.6.3.14) {Saccharomyces
cerevisiae}; contains Pfam profile PF00137: ATP synthase
subunit C
Length = 180
Score = 84.2 bits (199), Expect = 5e-17
Identities = 43/141 (30%), Positives = 76/141 (53%), Gaps = 6/141 (4%)
Frame = +2
Query: 98 FGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVA 277
F +G A +I S LGAA+G +G+ + ++ P + K++I V+ +AIYG++VA
Sbjct: 25 FSAIGIAISIGVSVLGAAWGIYITGSSLIGAAIEAPRITSKNLISVIFCEAVAIYGVIVA 84
Query: 278 VLIAGALQEPANYPLY------KGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQP 439
+++ L+ + +Y G+ +G+ VGF+ L G +GI+G + AQ
Sbjct: 85 IILQTKLESVPSSKMYDAESLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNS 144
Query: 440 RLFVGMILILIXAEVXGLYGL 502
LFV +++I I GL+G+
Sbjct: 145 TLFVKILVIEIFGSALGLFGV 165
>At2g25610.1 68415.m03068 H+-transporting two-sector ATPase, C
subunit family protein similar to SP|P23968 Vacuolar ATP
synthase 22 kDa proteolipid subunit (EC 3.6.3.14)
{Saccharomyces cerevisiae}; contains Pfam profile
PF00137: ATP synthase subunit C
Length = 178
Score = 84.2 bits (199), Expect = 5e-17
Identities = 43/141 (30%), Positives = 76/141 (53%), Gaps = 6/141 (4%)
Frame = +2
Query: 98 FGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVA 277
F +G A +I S LGAA+G +G+ + ++ P + K++I V+ +AIYG++VA
Sbjct: 23 FSAIGIAISIGVSVLGAAWGIYITGSSLIGAAIEAPRITSKNLISVIFCEAVAIYGVIVA 82
Query: 278 VLIAGALQEPANYPLY------KGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQP 439
+++ L+ + +Y G+ +G+ VGF+ L G +GI+G + AQ
Sbjct: 83 IILQTKLESVPSSKMYDAESLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNS 142
Query: 440 RLFVGMILILIXAEVXGLYGL 502
LFV +++I I GL+G+
Sbjct: 143 TLFVKILVIEIFGSALGLFGV 163
>At1g80480.1 68414.m09427 PRLI-interacting factor L, putative
similar to PRLI-interacting factor L [Arabidopsis
thaliana] GI:11139268; contains Pfam profile PF02492:
Cobalamin synthesis protein/P47K
Length = 444
Score = 32.3 bits (70), Expect = 0.20
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = -2
Query: 340 VDEPFVKGVVGWLLEGTSNQDSHDQTVDGNNTRHDDRNDRLHDQLRPHH 194
VD +V G+ G+ LE + + D D ++ HD +D HD HH
Sbjct: 283 VDLDYVLGIGGFDLERIESSVNEDDKGDHHDHDHDHHHDHNHDHDHHHH 331
>At5g56330.1 68418.m07031 carbonic anhydrase family protein contains
proline-rich extensin domains, INTERPRO:IPR002965;
contains Pfam profile PF00194: Eukaryotic-type carbonic
anhydrase
Length = 350
Score = 31.5 bits (68), Expect = 0.36
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = -3
Query: 423 PRTPASPTMPMAKPAARPENPTAKPAP 343
P+ +PT P KPA P P KPAP
Sbjct: 53 PKPKPAPTPPKPKPAPAPTPPKPKPAP 79
Score = 30.3 bits (65), Expect = 0.82
Identities = 21/63 (33%), Positives = 26/63 (41%)
Frame = -3
Query: 423 PRTPASPTMPMAKPAARPENPTAKPAPKWMNPL*RG*LAGSWRAPAIRTATTRP*MAIIP 244
P+ +PT P KP P P KPAP P + A + P + A T P P
Sbjct: 42 PKPTPAPTPPKPKPKPAPTPPKPKPAPAPTPPKPKPAPAPTPPKPKPKPAPTPPNPKPTP 101
Query: 243 AMT 235
A T
Sbjct: 102 APT 104
Score = 29.5 bits (63), Expect = 1.4
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -3
Query: 423 PRTPASPTMPMAKPAARPENPTAKPAP 343
P+ +PT P KP P P KPAP
Sbjct: 86 PKPKPAPTPPNPKPTPAPTPPKPKPAP 112
Score = 27.9 bits (59), Expect = 4.4
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = -3
Query: 423 PRTPASPTMPMAKPAARPENPTAKPAP 343
P+ +PT P KP P P KP P
Sbjct: 31 PKPAPAPTPPKPKPTPAPTPPKPKPKP 57
Score = 27.9 bits (59), Expect = 4.4
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = -3
Query: 423 PRTPASPTMPMAKPAARPENPTAKPAPK 340
P+ +PT P KPA P PT P PK
Sbjct: 97 PKPTPAPTPPKPKPAPAPA-PTPAPKPK 123
>At4g16980.1 68417.m02560 arabinogalactan-protein family similar to
arabinogalactan protein [Arabidopsis thaliana]
gi|10880495|gb|AAG24277; contains proline-rich extensin
domains, INTERPRO:IPR002965
Length = 164
Score = 30.3 bits (65), Expect = 0.82
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -3
Query: 423 PRTPASPTMPMAKPAARPENPTAKPAP 343
P A P MPMA P P P+ P+P
Sbjct: 78 PMPMAPPPMPMASPPMMPMTPSTSPSP 104
>At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 334
Score = 29.9 bits (64), Expect = 1.1
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -3
Query: 423 PRTPASPTMPMAKPAARPENPTAKPAPKWMNP 328
P TP PT P P + P+ PT KP P P
Sbjct: 125 PSTPKPPTKP---PPSTPKPPTTKPPPSTPKP 153
>At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 299
Score = 29.5 bits (63), Expect = 1.4
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -3
Query: 423 PRTPASPTMPMAKPAARPENPTAKPAP 343
P+TPAS + P+A RP P P P
Sbjct: 108 PQTPASVSAPVAPAPTRPPPPAPTPTP 134
>At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 419
Score = 29.5 bits (63), Expect = 1.4
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -3
Query: 423 PRTPASPTMPMAKPAARPENPTAKPAP 343
P+TPAS + P+A RP P P P
Sbjct: 108 PQTPASVSAPVAPAPTRPPPPAPTPTP 134
>At4g33970.1 68417.m04820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 699
Score = 29.1 bits (62), Expect = 1.9
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 5/39 (12%)
Frame = -3
Query: 426 VPRTPAS-----PTMPMAKPAARPENPTAKPAPKWMNPL 325
VP TP PT P+ KP+ P P KP+P P+
Sbjct: 431 VPTTPVHKPTPVPTTPVQKPSPVPTTPVQKPSPVPTTPV 469
Score = 28.3 bits (60), Expect = 3.3
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 5/39 (12%)
Frame = -3
Query: 426 VPRTPAS-----PTMPMAKPAARPENPTAKPAPKWMNPL 325
VP TP PT P+ KP+ P P +P+P P+
Sbjct: 442 VPTTPVQKPSPVPTTPVQKPSPVPTTPVHEPSPVLATPV 480
>At2g41190.1 68415.m05087 amino acid transporter family protein low
similarity to vesicular GABA transporter [Rattus
norvegicus] GI:2587061; belongs to INTERPRO:IPR002422
amino acid/polyamine transporter, family II
Length = 536
Score = 29.1 bits (62), Expect = 1.9
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Frame = +2
Query: 92 PFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPV--VMAGIIAIYG 265
PFFG+M A + S L A A I R ++I+ SII V++G + Y
Sbjct: 467 PFFGLMMALIGSLLSILVAIIMPALCFIKIMGNKATRTQMILSSIIVAIGVVSGTLGTYS 526
Query: 266 LVVAVL 283
V ++
Sbjct: 527 SVAKII 532
>At1g26150.1 68414.m03192 protein kinase family protein similar to
Pto kinase interactor 1 GI:3668069 from [Lycopersicon
esculentum]
Length = 760
Score = 28.7 bits (61), Expect = 2.5
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -3
Query: 429 AVPRTPASPTMPMAKPAARPENPTAKPAP 343
A P TP + P P PE+P + PAP
Sbjct: 132 APPTTPITSPSPPTNPPPPPESPPSLPAP 160
>At5g42720.1 68418.m05203 glycosyl hydrolase family 17 protein
similar to glucan endo-1,3-beta-glucosidase precursor
SP:P52409 from [Triticum aestivum]
Length = 438
Score = 27.9 bits (59), Expect = 4.4
Identities = 17/55 (30%), Positives = 21/55 (38%)
Frame = -3
Query: 492 RPXTSAXIRIRIIPTNNLGC*AVPRTPASPTMPMAKPAARPENPTAKPAPKWMNP 328
RP + I + T N P SPT P PAA P T P+ + P
Sbjct: 335 RPDLTMTYDIGLTKTTNYN--QTSMAPLSPTRPRLPPAAAPTRQTLPSPPQMILP 387
>At4g36550.1 68417.m05190 U-box domain-containing protein low
similarity to immediate-early fungal elicitor protein
CMPG1 [Petroselinum crispum] GI:14582200; contains Pfam
profile PF04564: U-box domain
Length = 577
Score = 27.9 bits (59), Expect = 4.4
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -3
Query: 420 RTPASPTMPMAKPAARPENPTAKPAPK 340
RT ASPT + P PE P+PK
Sbjct: 534 RTTASPTSQVVTPVTHPEPVKITPSPK 560
>At3g04570.1 68416.m00485 DNA-binding protein-related contains Pfam
domain PF03479: Domain of unknown function (DUF296),
found in AT-hook motifs Pfam:PF02178
Length = 315
Score = 27.9 bits (59), Expect = 4.4
Identities = 17/64 (26%), Positives = 28/64 (43%)
Frame = -2
Query: 391 GETGSQTRESYSQTSTQVDEPFVKGVVGWLLEGTSNQDSHDQTVDGNNTRHDDRNDRLHD 212
G+ E+ S+Q+ +P + + ++ N H Q VD NN DDR++ D
Sbjct: 8 GQVNLSGLETTPPGSSQLKKPDLHISMNMAMDSGHNNHHHHQEVD-NNNNDDDRDNLSGD 66
Query: 211 QLRP 200
P
Sbjct: 67 DHEP 70
>At5g38030.1 68418.m04581 MATE efflux family protein similar to
ripening regulated protein DDTFR18 [Lycopersicon
esculentum] GI:12231296; contains Pfam profile PF01554:
Uncharacterized membrane protein family; putative
multidrug efflux protein NorM - Vibrio parahaemolyticus,
EMBL:AB010463
Length = 498
Score = 27.5 bits (58), Expect = 5.8
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
Frame = +2
Query: 71 ENNPIYGPFFGVMGAASAIIFSALGAAYGTAK-SGTGI---AAMSVMRPELIMKSIIPVV 238
EN+ I G FGVM + + + G A+G K S G+ + ++ ++ S++ +
Sbjct: 88 ENSVIAGFSFGVMLGMGSALETLCGQAFGAGKLSMLGVYLQRSWVILNVTAVILSLLYIF 147
Query: 239 MAGIIAIYGLVVAV 280
A I+A G A+
Sbjct: 148 AAPILAFIGQTPAI 161
>At5g19380.1 68418.m02309 expressed protein
Length = 447
Score = 27.5 bits (58), Expect = 5.8
Identities = 28/96 (29%), Positives = 41/96 (42%), Gaps = 1/96 (1%)
Frame = +2
Query: 233 VVMAGIIAIYGLVVAVLIAGALQEPANYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDA 412
V+ A A G+ VL AL YP + + +AV FS L + GIV
Sbjct: 106 VIAAATTAALGVGNRVLYKLALIPLKQYPFFLAQLSTFGYVAVYFSILYFRYRAGIV-TK 164
Query: 413 GVRGTAQQPRLFVGMI-LILIXAEVXGLYGLSSPST 517
+ + P L VG++ + + A + LS PST
Sbjct: 165 EMLSVPKLPFLIVGVLESLALAAGMAAASNLSGPST 200
>At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 428
Score = 27.5 bits (58), Expect = 5.8
Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Frame = -3
Query: 423 PRTPASPTMP--MAKPAARPENPTAKPAPKWM 334
P+ PA P P + P P+ PT KP P ++
Sbjct: 42 PKHPAKPPKPPTVKPPTHTPKPPTVKPPPPYI 73
>At2g29050.1 68415.m03531 rhomboid family protein contains PFAM
domain PF01694, Rhomboid family
Length = 389
Score = 27.5 bits (58), Expect = 5.8
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = +1
Query: 121 CYHLQRLGSCLWNCQVRNWYC 183
C++L + + LW+C+ +N YC
Sbjct: 328 CHYLSCIPTSLWSCKSQNVYC 348
>At2g17820.1 68415.m02064 histidine kinase 1 99% identical to
GP:4586626
Length = 1207
Score = 27.5 bits (58), Expect = 5.8
Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = -2
Query: 412 CISHDAYGETGSQTRESYSQTSTQVDEPFVKGVVGWLLEGT-SNQDSHDQTVDGNNTRHD 236
C S D+ ET + + S + + P +K +L++ T SN DS ++ N +
Sbjct: 966 CSSDDS-SETSGEKQVDKSVKPSTLHSPVLKN---YLIDATTSNDDSTSASMTQKNPEEE 1021
Query: 235 DRNDRLH 215
D DRL+
Sbjct: 1022 DWKDRLY 1028
>At3g26590.1 68416.m03319 MATE efflux family protein similar to
ripening regulated protein DDTFR18 [Lycopersicon
esculentum] GI:12231296; contains Pfam profile: PF01554
uncharacterized membrane protein family
Length = 500
Score = 27.1 bits (57), Expect = 7.7
Identities = 19/80 (23%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Frame = +2
Query: 71 ENNPIYGPFFGVMGAASAIIFSALGAAYGTAK-SGTGI---AAMSVMRPELIMKSIIPVV 238
EN+ + G FG+M + + + G A+G K S G+ + ++ ++ S++ +
Sbjct: 88 ENSVVAGFSFGIMLGMGSALETLCGQAFGAGKLSMLGVYLQRSWVILNVTALILSLLYIF 147
Query: 239 MAGIIAIYGLVVAVLIAGAL 298
A I+A G A+ A +
Sbjct: 148 AAPILASIGQTAAISSAAGI 167
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,983,906
Number of Sequences: 28952
Number of extensions: 259927
Number of successful extensions: 950
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 851
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 932
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 957410176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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