Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS302C12f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    24   0.71 
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    23   1.2  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    23   1.6  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    23   2.2  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    22   3.8  
DQ494421-1|ABF55372.1|   73|Tribolium castaneum telomerase rever...    22   3.8  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    22   3.8  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   5.0  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   6.6  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    21   8.7  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    21   8.7  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    21   8.7  

>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 24.2 bits (50), Expect = 0.71
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2

Query: 232 VCARLLPCKTVLQAH 188
           +C R+L CK+ LQ H
Sbjct: 139 ICHRVLSCKSALQMH 153


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 7/26 (26%), Positives = 18/26 (69%)
 Frame = +3

Query: 369 YKLFQSIFEHTTSTIQVGFRFHNLGI 446
           +++F+S + H  +T++  + F +LG+
Sbjct: 302 FQVFESFYLHKATTLETVYYFISLGL 327



 Score = 22.6 bits (46), Expect = 2.2
 Identities = 9/21 (42%), Positives = 16/21 (76%)
 Frame = +2

Query: 152 FWITKGLLFLKLVSLKYCLAW 214
           ++I+ GLL L+LVS+ +  +W
Sbjct: 321 YFISLGLLILRLVSVCFYGSW 341


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -1

Query: 467 TFLIVCLNAQIMESKTNLNCAGGMLK 390
           TFLIV +  ++ ++ TN+N      K
Sbjct: 341 TFLIVMIQFEMTQNSTNINFVSTFFK 366



 Score = 22.2 bits (45), Expect = 2.9
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = -3

Query: 267 YFWYFRSYMSF 235
           +FW ++SYMS+
Sbjct: 124 FFWSYQSYMSY 134


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -1

Query: 467 TFLIVCLNAQIMESKTNLN 411
           TFLIV +  ++ ++ TN+N
Sbjct: 341 TFLIVMIQFEMTQNSTNIN 359



 Score = 22.2 bits (45), Expect = 2.9
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = -3

Query: 267 YFWYFRSYMSF 235
           +FW ++SYMS+
Sbjct: 124 FFWSYQSYMSY 134


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +2

Query: 308 KTLKSIQNIEQNFSY 352
           + LK I NI+ NF Y
Sbjct: 53  EALKKIYNIQNNFEY 67


>DQ494421-1|ABF55372.1|   73|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 73

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 10/39 (25%), Positives = 20/39 (51%)
 Frame = +1

Query: 226 HRLEGHITSEVPKIFDAVFECTLEMINKDFEEYPEHRTE 342
           +RL      + PKI ++ +   L +  K+F    +H+T+
Sbjct: 5   YRLSLKSRQKAPKIVNSKYNSILNIALKNFRLCKKHKTK 43


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 10/39 (25%), Positives = 20/39 (51%)
 Frame = +1

Query: 226 HRLEGHITSEVPKIFDAVFECTLEMINKDFEEYPEHRTE 342
           +RL      + PKI ++ +   L +  K+F    +H+T+
Sbjct: 5   YRLSLKSRQKAPKIVNSKYNSILNIALKNFRLCKKHKTK 43


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = -1

Query: 125 KFSKTILLSIERVTQLEIRFKVSFFIILIFLMR 27
           KFS      IER T L +      F+I+I   R
Sbjct: 319 KFSAANFFDIERSTILSVLGTACTFLIIIVQFR 351


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 14/45 (31%), Positives = 21/45 (46%)
 Frame = +2

Query: 71  LFQVGLHARLITVWFWKTLFHLFSMLCFWITKGLLFLKLVSLKYC 205
           LF V L   L+ ++++  +  LF       T  LLFL  +   YC
Sbjct: 247 LFTVHL-LLLVCIYYFYYMHLLFCCAFIIFTMHLLFLLCIYYFYC 290


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = +1

Query: 7   VAVTKQPLIKNMRIIKKETLNLISSWVTRSIDNSMVL 117
           +A+ K P I N+         LISS VT SI   +V+
Sbjct: 369 MAIEKNPPIMNLNGYANVNRKLISSTVT-SIATYLVM 404


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = +1

Query: 7   VAVTKQPLIKNMRIIKKETLNLISSWVTRSIDNSMVL 117
           +A+ K P I N+         LISS VT SI   +V+
Sbjct: 369 MAIEKNPPIMNLNGYANVNRKLISSTVT-SIATYLVM 404


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -2

Query: 244 YVLQVCARLLPCKTVLQAHE 185
           +  +VC R    K VLQ HE
Sbjct: 135 FTCEVCNRSFGYKHVLQNHE 154


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,137
Number of Sequences: 336
Number of extensions: 3098
Number of successful extensions: 15
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)