BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ovS302C12f (521 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 01_06_0358 - 28677781-28677901,28678327-28678430,28678542-286786... 32 0.32 02_05_0146 - 26267245-26267339,26267427-26267469,26267589-262677... 31 0.56 02_05_1072 - 33878676-33878747,33878926-33879949,33880684-338808... 30 0.98 10_05_0093 - 9108883-9109068,9109156-9109248,9109363-9109441,910... 29 1.7 06_03_0529 - 21788132-21788395,21788414-21788511,21789458-217899... 29 2.3 04_04_1054 + 30437468-30437763,30438647-30438779,30439099-304391... 28 5.2 05_05_0191 + 23127068-23127331,23127514-23127546 27 6.9 02_02_0095 + 6716327-6716335,6717302-6717451,6717523-6717583,671... 27 9.1 >01_06_0358 - 28677781-28677901,28678327-28678430,28678542-28678625, 28679221-28679265,28679523-28679594,28679721-28679759, 28679966-28680061,28680492-28680566,28681717-28681764, 28681888-28681971,28682141-28682341,28682394-28682561, 28683232-28683372,28683470-28683517,28683845-28684087, 28684184-28684297,28685134-28685163,28685361-28685951, 28686033-28686620,28686744-28686863,28687764-28687938, 28688397-28688562,28688653-28688755,28689227-28689319, 28690759-28690918,28691754-28691872 Length = 1275 Score = 31.9 bits (69), Expect = 0.32 Identities = 15/57 (26%), Positives = 24/57 (42%) Frame = +1 Query: 259 PKIFDAVFECTLEMINKDFEEYPEHRTEFFLLLQAVNTNCFKAFLSIPPAQFKLVLD 429 P + D V E ++NK + P+ F L F L +PP Q ++ L+ Sbjct: 1156 PALVDFVMEILSRLVNKQIWKMPKLWVGFLKLAYQTQPRSFDVILQLPPPQLEIALN 1212 >02_05_0146 - 26267245-26267339,26267427-26267469,26267589-26267725, 26268172-26268299,26268419-26268495,26268593-26268679, 26268817-26268933,26269115-26269165,26269383-26269497, 26270033-26270292 Length = 369 Score = 31.1 bits (67), Expect = 0.56 Identities = 14/42 (33%), Positives = 24/42 (57%) Frame = -1 Query: 299 ISRVHSKTASNIFGTSEVICPSSLCTIAAMQDSTSGSRASGT 174 +S ++ N G +V+CP+ LCT AM +++ RA G+ Sbjct: 308 LSTPRTERCPNCSGAGKVMCPTCLCTGMAMANNSIDRRAWGS 349 >02_05_1072 - 33878676-33878747,33878926-33879949,33880684-33880804, 33881150-33881560,33881781-33881933,33882321-33882468 Length = 642 Score = 30.3 bits (65), Expect = 0.98 Identities = 17/64 (26%), Positives = 36/64 (56%), Gaps = 1/64 (1%) Frame = -1 Query: 353 NKKNSVLCSGYSSKSLLIISRVHSKTASNIFGTSEVICPS-SLCTIAAMQDSTSGSRASG 177 ++++++ SG+S+ LLI ++ A+ + GTS P+ S + +D+ G+ + G Sbjct: 423 SQQSTIPLSGFSANGLLIHGSFNNTCANKLGGTSSSCAPARSSNDLMVARDTKGGASSFG 482 Query: 176 TAVL 165 A+L Sbjct: 483 GAML 486 >10_05_0093 - 9108883-9109068,9109156-9109248,9109363-9109441, 9109529-9109639,9109715-9109857,9110050-9110522, 9110568-9111075,9111241-9111810,9111883-9112119, 9112196-9112465 Length = 889 Score = 29.5 bits (63), Expect = 1.7 Identities = 16/57 (28%), Positives = 28/57 (49%) Frame = +1 Query: 157 DYQRTAVPEAREPEVLSCMAAIVHRLEGHITSEVPKIFDAVFECTLEMINKDFEEYP 327 +++ +VP+ EP+V ++ +E I + D V E T+E +KD E P Sbjct: 503 EHEVQSVPDVEEPDVALPDVQVLSSIEPTIHEDPNPTRDPVEETTVEATDKDKSEVP 559 >06_03_0529 - 21788132-21788395,21788414-21788511,21789458-21789953, 21790033-21790134,21790218-21790270,21790354-21790414, 21790491-21790640,21791298-21791350,21794125-21794152 Length = 434 Score = 29.1 bits (62), Expect = 2.3 Identities = 10/38 (26%), Positives = 20/38 (52%) Frame = -3 Query: 339 CSMFWILFKVFVNHFQSTFKDCIKYFWYFRSYMSFKSV 226 C++++ ++ + F S F +YFW + +FK V Sbjct: 189 CNLYYGFVRILIKSFTSEFPHVERYFWTMVNQPNFKKV 226 >04_04_1054 + 30437468-30437763,30438647-30438779,30439099-30439159, 30439370-30439483,30439813-30439971,30440124-30440206, 30440423-30440549,30440872-30440951,30441027-30441113, 30441316-30441440,30441543-30441603,30441806-30441859, 30441946-30442023,30442449-30442554,30442655-30442803, 30442945-30443052 Length = 606 Score = 27.9 bits (59), Expect = 5.2 Identities = 15/50 (30%), Positives = 27/50 (54%) Frame = -1 Query: 446 NAQIMESKTNLNCAGGMLKNALKQFVLTACSNKKNSVLCSGYSSKSLLII 297 + + +E+ TNL+ G + NA+ + +L +K + L SG S+ L I Sbjct: 345 DVETVETSTNLHFRGARVWNAIIEDLLAKGMSKAQNALLSGCSAGGLAAI 394 >05_05_0191 + 23127068-23127331,23127514-23127546 Length = 98 Score = 27.5 bits (58), Expect = 6.9 Identities = 12/32 (37%), Positives = 17/32 (53%) Frame = +1 Query: 181 EAREPEVLSCMAAIVHRLEGHITSEVPKIFDA 276 EA+E EVL CM R H E ++++A Sbjct: 7 EAKEMEVLECMGQAARRPGSHGKDEAQRVWEA 38 >02_02_0095 + 6716327-6716335,6717302-6717451,6717523-6717583, 6717646-6717725,6717802-6717903,6717982-6718471, 6718796-6719171,6720320-6720379,6720887-6721056, 6721287-6721340,6721384-6721523,6722362-6722511, 6722582-6722642,6722705-6722784,6722933-6723034, 6723111-6723612,6724401-6724776,6725419-6725493, 6726058-6726198,6726264-6726282 Length = 1065 Score = 27.1 bits (57), Expect = 9.1 Identities = 10/38 (26%), Positives = 19/38 (50%) Frame = -3 Query: 339 CSMFWILFKVFVNHFQSTFKDCIKYFWYFRSYMSFKSV 226 C+++ ++ +F S F +YFW + +FK V Sbjct: 735 CNLYMGFARIMTKNFTSEFPHVERYFWTMVNQPNFKKV 772 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,166,825 Number of Sequences: 37544 Number of extensions: 287048 Number of successful extensions: 768 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 749 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 767 length of database: 14,793,348 effective HSP length: 77 effective length of database: 11,902,460 effective search space used: 1142636160 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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