Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS302C12f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y08614-1|CAA69905.2| 1071|Homo sapiens CRM1 protein. 283 3e-76
D89729-1|BAA23415.1| 1071|Homo sapiens CRM1 protein protein. 283 3e-76
BC032847-1|AAH32847.1| 1071|Homo sapiens XPO1 protein protein. 283 3e-76
AC016727-1|AAY14949.1| 1071|Homo sapiens unknown protein. 283 3e-76
AK126100-1|BAC86439.1| 1197|Homo sapiens protein ( Homo sapiens ... 32 1.4
BC119680-1|AAI19681.1| 316|Homo sapiens ZNF101 protein protein. 31 2.4
BC011502-1|AAH11502.2| 373|Homo sapiens ZNF101 protein protein. 31 2.4
AY149174-1|AAN46749.1| 436|Homo sapiens zinc finger protein 12 ... 31 2.4
AL096747-1|CAB46422.1| 232|Homo sapiens hypothetical protein pr... 31 2.4
BC112926-1|AAI12927.1| 1306|Homo sapiens ARHGEF10 protein protein. 29 7.5
AB002292-1|BAA20754.2| 1405|Homo sapiens KIAA0294 protein. 29 7.5
>Y08614-1|CAA69905.2| 1071|Homo sapiens CRM1 protein.
Length = 1071
Score = 283 bits (693), Expect = 3e-76
Identities = 134/173 (77%), Positives = 151/173 (87%)
Frame = +1
Query: 1 NGVAVTKQPLIKNMRIIKKETLNLISSWVTRSIDNSMVLENFIPPLLDAVLLDYQRTAVP 180
NG VTKQPLI++MR +K+ETL LIS WV+RS D MV ENF+PPLLDAVL+DYQR VP
Sbjct: 735 NGEMVTKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVAENFVPPLLDAVLIDYQRN-VP 793
Query: 181 EAREPEVLSCMAAIVHRLEGHITSEVPKIFDAVFECTLEMINKDFEEYPEHRTEFFLLLQ 360
AREPEVLS MA IV++L GHIT+E+P+IFDAVFECTL MINKDFEEYPEHRT FFLLLQ
Sbjct: 794 AAREPEVLSTMAIIVNKLGGHITAEIPQIFDAVFECTLNMINKDFEEYPEHRTNFFLLLQ 853
Query: 361 AVNTNCFKAFLSIPPAQFKLVLDSIIWAFKHTMRNVADTGLQILYRLLLNVEE 519
AVN++CF AFL+IPP QFKLVLDSIIWAFKHTMRNVADTGLQIL+ LL NV +
Sbjct: 854 AVNSHCFPAFLAIPPTQFKLVLDSIIWAFKHTMRNVADTGLQILFTLLQNVAQ 906
>D89729-1|BAA23415.1| 1071|Homo sapiens CRM1 protein protein.
Length = 1071
Score = 283 bits (693), Expect = 3e-76
Identities = 134/173 (77%), Positives = 151/173 (87%)
Frame = +1
Query: 1 NGVAVTKQPLIKNMRIIKKETLNLISSWVTRSIDNSMVLENFIPPLLDAVLLDYQRTAVP 180
NG VTKQPLI++MR +K+ETL LIS WV+RS D MV ENF+PPLLDAVL+DYQR VP
Sbjct: 735 NGEMVTKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVAENFVPPLLDAVLIDYQRN-VP 793
Query: 181 EAREPEVLSCMAAIVHRLEGHITSEVPKIFDAVFECTLEMINKDFEEYPEHRTEFFLLLQ 360
AREPEVLS MA IV++L GHIT+E+P+IFDAVFECTL MINKDFEEYPEHRT FFLLLQ
Sbjct: 794 AAREPEVLSTMAIIVNKLGGHITAEIPQIFDAVFECTLNMINKDFEEYPEHRTNFFLLLQ 853
Query: 361 AVNTNCFKAFLSIPPAQFKLVLDSIIWAFKHTMRNVADTGLQILYRLLLNVEE 519
AVN++CF AFL+IPP QFKLVLDSIIWAFKHTMRNVADTGLQIL+ LL NV +
Sbjct: 854 AVNSHCFPAFLAIPPTQFKLVLDSIIWAFKHTMRNVADTGLQILFTLLQNVAQ 906
>BC032847-1|AAH32847.1| 1071|Homo sapiens XPO1 protein protein.
Length = 1071
Score = 283 bits (693), Expect = 3e-76
Identities = 134/173 (77%), Positives = 151/173 (87%)
Frame = +1
Query: 1 NGVAVTKQPLIKNMRIIKKETLNLISSWVTRSIDNSMVLENFIPPLLDAVLLDYQRTAVP 180
NG VTKQPLI++MR +K+ETL LIS WV+RS D MV ENF+PPLLDAVL+DYQR VP
Sbjct: 735 NGEMVTKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVAENFVPPLLDAVLIDYQRN-VP 793
Query: 181 EAREPEVLSCMAAIVHRLEGHITSEVPKIFDAVFECTLEMINKDFEEYPEHRTEFFLLLQ 360
AREPEVLS MA IV++L GHIT+E+P+IFDAVFECTL MINKDFEEYPEHRT FFLLLQ
Sbjct: 794 AAREPEVLSTMAIIVNKLGGHITAEIPQIFDAVFECTLNMINKDFEEYPEHRTNFFLLLQ 853
Query: 361 AVNTNCFKAFLSIPPAQFKLVLDSIIWAFKHTMRNVADTGLQILYRLLLNVEE 519
AVN++CF AFL+IPP QFKLVLDSIIWAFKHTMRNVADTGLQIL+ LL NV +
Sbjct: 854 AVNSHCFPAFLAIPPTQFKLVLDSIIWAFKHTMRNVADTGLQILFTLLQNVAQ 906
>AC016727-1|AAY14949.1| 1071|Homo sapiens unknown protein.
Length = 1071
Score = 283 bits (693), Expect = 3e-76
Identities = 134/173 (77%), Positives = 151/173 (87%)
Frame = +1
Query: 1 NGVAVTKQPLIKNMRIIKKETLNLISSWVTRSIDNSMVLENFIPPLLDAVLLDYQRTAVP 180
NG VTKQPLI++MR +K+ETL LIS WV+RS D MV ENF+PPLLDAVL+DYQR VP
Sbjct: 735 NGEMVTKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVAENFVPPLLDAVLIDYQRN-VP 793
Query: 181 EAREPEVLSCMAAIVHRLEGHITSEVPKIFDAVFECTLEMINKDFEEYPEHRTEFFLLLQ 360
AREPEVLS MA IV++L GHIT+E+P+IFDAVFECTL MINKDFEEYPEHRT FFLLLQ
Sbjct: 794 AAREPEVLSTMAIIVNKLGGHITAEIPQIFDAVFECTLNMINKDFEEYPEHRTNFFLLLQ 853
Query: 361 AVNTNCFKAFLSIPPAQFKLVLDSIIWAFKHTMRNVADTGLQILYRLLLNVEE 519
AVN++CF AFL+IPP QFKLVLDSIIWAFKHTMRNVADTGLQIL+ LL NV +
Sbjct: 854 AVNSHCFPAFLAIPPTQFKLVLDSIIWAFKHTMRNVADTGLQILFTLLQNVAQ 906
>AK126100-1|BAC86439.1| 1197|Homo sapiens protein ( Homo sapiens cDNA
FLJ44112 fis, clone TESTI4046282. ).
Length = 1197
Score = 31.9 bits (69), Expect = 1.4
Identities = 27/119 (22%), Positives = 54/119 (45%), Gaps = 1/119 (0%)
Frame = -1
Query: 521 FSSTFNNSRYNICKPVSATFLIVCLNAQIMESKTNLNCAGGMLKNALKQFVLTACSNKKN 342
+S +S YN+ K L + + +ME++ LN L + ++Q L+ CS +
Sbjct: 669 YSKDDGSSFYNLTKLKDEITLSMLKSMLLMEAEDRLN----FLLSEVEQKTLSQCSAGEL 724
Query: 341 SVLCSGYSSKSLLIISRVHSK-TASNIFGTSEVICPSSLCTIAAMQDSTSGSRASGTAV 168
++ + + + R + +A+ +F T ++ S L +QD T + GT+V
Sbjct: 725 EIVVEARLQLAAVALQRHRAAYSAAIVFSTLTLLQDSKLFEKKVVQDDTENPVSPGTSV 783
>BC119680-1|AAI19681.1| 316|Homo sapiens ZNF101 protein protein.
Length = 316
Score = 31.1 bits (67), Expect = 2.4
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = -2
Query: 250 KLYVLQVCARLLPCKTVLQAHE 185
KLY Q CA++ C T LQAHE
Sbjct: 188 KLYECQKCAKVFRCPTSLQAHE 209
>BC011502-1|AAH11502.2| 373|Homo sapiens ZNF101 protein protein.
Length = 373
Score = 31.1 bits (67), Expect = 2.4
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = -2
Query: 250 KLYVLQVCARLLPCKTVLQAHE 185
KLY Q CA++ C T LQAHE
Sbjct: 245 KLYECQKCAKVFRCPTSLQAHE 266
>AY149174-1|AAN46749.1| 436|Homo sapiens zinc finger protein 12
protein.
Length = 436
Score = 31.1 bits (67), Expect = 2.4
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = -2
Query: 250 KLYVLQVCARLLPCKTVLQAHE 185
KLY Q CA++ C T LQAHE
Sbjct: 308 KLYECQKCAKVFRCPTSLQAHE 329
>AL096747-1|CAB46422.1| 232|Homo sapiens hypothetical protein
protein.
Length = 232
Score = 31.1 bits (67), Expect = 2.4
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = -2
Query: 250 KLYVLQVCARLLPCKTVLQAHE 185
KLY Q CA++ C T LQAHE
Sbjct: 188 KLYECQKCAKVFRCPTSLQAHE 209
>BC112926-1|AAI12927.1| 1306|Homo sapiens ARHGEF10 protein protein.
Length = 1306
Score = 29.5 bits (63), Expect = 7.5
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -3
Query: 255 FRSYMSFKSVHDCCHARQYFRLTSFRNSSPLVIQKHSIEKR 133
F + F + C H + SF+NS+P VI+ ++E R
Sbjct: 853 FSTAHGFLWIGSCTHQMGQIAIVSFQNSTPKVIECFNVESR 893
>AB002292-1|BAA20754.2| 1405|Homo sapiens KIAA0294 protein.
Length = 1405
Score = 29.5 bits (63), Expect = 7.5
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -3
Query: 255 FRSYMSFKSVHDCCHARQYFRLTSFRNSSPLVIQKHSIEKR 133
F + F + C H + SF+NS+P VI+ ++E R
Sbjct: 952 FSTAHGFLWIGSCTHQMGQIAIVSFQNSTPKVIECFNVESR 992
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,772,403
Number of Sequences: 237096
Number of extensions: 1719410
Number of successful extensions: 7762
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 7529
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7758
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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