BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ovS302C12f (521 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precur... 23 1.9 U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive o... 22 3.3 AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 22 3.3 AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin ... 22 3.3 AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc fi... 22 3.3 AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 21 5.8 AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 21 7.7 AB086196-1|BAD06465.1| 289|Apis mellifera Period protein. 21 7.7 >AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precursor protein. Length = 405 Score = 23.0 bits (47), Expect = 1.9 Identities = 8/17 (47%), Positives = 12/17 (70%) Frame = +3 Query: 426 RFHNLGI*TYNEECGRY 476 R N+GI ++ ECG+Y Sbjct: 362 RLVNIGIISWGAECGKY 378 >U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive opsin protein. Length = 377 Score = 22.2 bits (45), Expect = 3.3 Identities = 7/16 (43%), Positives = 9/16 (56%) Frame = +2 Query: 110 WFWKTLFHLFSMLCFW 157 WFW T F + +L W Sbjct: 179 WFWVTPFTVLPLLKVW 194 >AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1 protein. Length = 500 Score = 22.2 bits (45), Expect = 3.3 Identities = 8/34 (23%), Positives = 17/34 (50%) Frame = -2 Query: 289 YIQRLHQIFLVLQKLYVLQVCARLLPCKTVLQAH 188 ++ +LHQ+ +K+Y +C K ++ H Sbjct: 245 HVLKLHQVAHYGEKVYKCTLCHETFGSKKTMELH 278 >AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin protein. Length = 377 Score = 22.2 bits (45), Expect = 3.3 Identities = 7/16 (43%), Positives = 9/16 (56%) Frame = +2 Query: 110 WFWKTLFHLFSMLCFW 157 WFW T F + +L W Sbjct: 179 WFWVTPFTVLPLLKVW 194 >AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc finger domain-Z2 isoform protein. Length = 71 Score = 22.2 bits (45), Expect = 3.3 Identities = 8/22 (36%), Positives = 14/22 (63%) Frame = -2 Query: 253 QKLYVLQVCARLLPCKTVLQAH 188 +KL+ Q+C ++L K L+ H Sbjct: 3 KKLFTCQLCGKVLCSKASLKRH 24 >AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. Length = 735 Score = 21.4 bits (43), Expect = 5.8 Identities = 7/15 (46%), Positives = 8/15 (53%) Frame = -3 Query: 477 GICHIPHCMFKCPDY 433 G+C P C C DY Sbjct: 281 GVCKWPGCEVICEDY 295 >AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein protein. Length = 1124 Score = 21.0 bits (42), Expect = 7.7 Identities = 9/16 (56%), Positives = 10/16 (62%) Frame = +3 Query: 123 LYSTSSRCCAFGLPKD 170 LY+T S C A G KD Sbjct: 176 LYTTPSICTALGYLKD 191 Score = 21.0 bits (42), Expect = 7.7 Identities = 11/31 (35%), Positives = 16/31 (51%) Frame = +1 Query: 67 NLISSWVTRSIDNSMVLENFIPPLLDAVLLD 159 N SS + N+ +E+F PP L LL+ Sbjct: 615 NQTSSASRENTSNTTSMESFKPPTLTESLLN 645 >AB086196-1|BAD06465.1| 289|Apis mellifera Period protein. Length = 289 Score = 21.0 bits (42), Expect = 7.7 Identities = 9/16 (56%), Positives = 10/16 (62%) Frame = +3 Query: 123 LYSTSSRCCAFGLPKD 170 LY+T S C A G KD Sbjct: 171 LYTTPSICTALGYLKD 186 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 157,684 Number of Sequences: 438 Number of extensions: 3445 Number of successful extensions: 11 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 9 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 11 length of database: 146,343 effective HSP length: 54 effective length of database: 122,691 effective search space used: 14600229 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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