Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS302C10f
         (444 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0795 - 19704354-19704464,19705152-19705214,19705298-197053...    59   2e-09
07_03_1027 - 23371826-23372006,23372110-23372171,23372595-233743...    30   0.96 
03_02_0968 - 12791229-12791423,12791831-12791928,12792021-12792222     27   5.1  
03_02_0981 + 12917195-12917572,12917661-12917818,12918732-129187...    27   6.8  

>04_03_0795 -
           19704354-19704464,19705152-19705214,19705298-19705378,
           19705468-19705623,19705711-19705785,19706477-19706587,
           19707206-19707304,19707453-19707546,19707779-19707838,
           19709262-19709334,19711448-19711490,19711533-19711606,
           19711985-19712075,19712170-19712214,19712533-19712589,
           19713440-19713544,19713817-19713932,19714625-19714634,
           19714810-19714920,19715502-19715594,19715664-19715690,
           19715736-19715798,19716326-19716451,19716812-19716949,
           19717164-19717832,19717949-19718123,19718269-19718450
          Length = 1015

 Score = 58.8 bits (136), Expect = 2e-09
 Identities = 33/105 (31%), Positives = 57/105 (54%)
 Frame = +2

Query: 53  KENYLEIITRFYFLFENIYQYIIDLNVFIDQLQDEAFIQQNMETVIKDIEGKQLLCESLY 232
           +E+    + RF+ L +    Y  +L  +++ LQ+  ++   ++ V++     QLL ES+ 
Sbjct: 87  RESCGSYMRRFFALLDAAVAYHDELCSYLNDLQEGLYVHCTLDGVLESNWACQLLTESMT 146

Query: 233 LYGAMLLLCDLFIPGPMRERLLVAFYRYSTSQSQSNIDDXCXXXR 367
           L+G M LL +  I G +RERLLVA+ R+    S  N++  C   R
Sbjct: 147 LFGCMALLMEHRISGLLRERLLVAYLRHERCFSFPNVERICKLCR 191


>07_03_1027 -
           23371826-23372006,23372110-23372171,23372595-23374335,
           23374609-23374704,23374967-23375043,23376807-23377307
          Length = 885

 Score = 29.9 bits (64), Expect = 0.96
 Identities = 16/36 (44%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
 Frame = +2

Query: 107 YQYIID-LNVFIDQLQDEAFIQQNMETVIKDIEGKQ 211
           Y  IID LNV+ +Q+  + ++  NME V++DIE +Q
Sbjct: 768 YDRIIDALNVYSEQMIRQGYVP-NMEDVLQDIEEEQ 802


>03_02_0968 - 12791229-12791423,12791831-12791928,12792021-12792222
          Length = 164

 Score = 27.5 bits (58), Expect = 5.1
 Identities = 14/37 (37%), Positives = 23/37 (62%)
 Frame = +2

Query: 188 IKDIEGKQLLCESLYLYGAMLLLCDLFIPGPMRERLL 298
           +KD E K++LC+++  +GA LL+      GP+   LL
Sbjct: 107 VKDGEAKRVLCDAVGEHGAGLLVVGSHGYGPVLRALL 143


>03_02_0981 +
           12917195-12917572,12917661-12917818,12918732-12918765,
           12918942-12919074,12919167-12919221,12919281-12920064,
           12920440-12920769,12920788-12920895,12921259-12921678,
           12921775-12921847,12922291-12922376,12922873-12922992,
           12923086-12923156,12923350-12923449
          Length = 949

 Score = 27.1 bits (57), Expect = 6.8
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = +3

Query: 150 KMKRSSNKTWKLLSKTLKENNYCVNHYI 233
           + KRS  K W+  + ++ +   C  HY+
Sbjct: 15  RCKRSDGKQWRCSAPSMPDKTVCEKHYV 42


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,929,590
Number of Sequences: 37544
Number of extensions: 174659
Number of successful extensions: 368
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 363
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 368
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 847740284
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)