Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS302C10f
         (444 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF003150-1|AAB54215.1|  997|Caenorhabditis elegans Hypothetical ...    44   7e-05
AL132846-4|CAB60347.1|  328|Caenorhabditis elegans Hypothetical ...    28   2.7  
Z22176-2|CAD91716.2|  650|Caenorhabditis elegans Hypothetical pr...    27   6.1  
Z98853-4|CAB57905.1|  301|Caenorhabditis elegans Hypothetical pr...    27   8.1  
U51999-6|AAV28361.1|  380|Caenorhabditis elegans Hypothetical pr...    27   8.1  
U23181-3|AAR12989.1|   80|Caenorhabditis elegans Insulin related...    27   8.1  

>AF003150-1|AAB54215.1|  997|Caenorhabditis elegans Hypothetical
           protein T05E7.3 protein.
          Length = 997

 Score = 43.6 bits (98), Expect = 7e-05
 Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 7/95 (7%)
 Frame = +2

Query: 56  ENYLEIITRFYFLFENIYQYIIDLNVFIDQLQDEAFIQQNMETVIKDIEGK-------QL 214
           E++L + T+FY  FE +      L   I +   ++FI    E  I + E +       +L
Sbjct: 65  ESHLRLQTQFYSTFEPVLIAFEQLFSSISEFV-QSFISYTKEAEIINGETRMDVNRTSEL 123

Query: 215 LCESLYLYGAMLLLCDLFIPGPMRERLLVAFYRYS 319
               LY+ G +++  D +IP P+RER+ +A YR S
Sbjct: 124 EAYCLYISGILIIYMDTYIPAPIRERIYIAIYRKS 158


>AL132846-4|CAB60347.1|  328|Caenorhabditis elegans Hypothetical
           protein Y43D4A.6 protein.
          Length = 328

 Score = 28.3 bits (60), Expect = 2.7
 Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
 Frame = +2

Query: 134 FIDQLQDEAFIQQNM--ETVIKDIEGKQLLCESLYLYGAMLLLCDLF 268
           F++Q+Q E +IQ+NM  + ++K + G  +  E  YL+   +   DLF
Sbjct: 47  FLEQIQQEYYIQKNMKHKNIVK-MYGMSMDTEFCYLFQEFVTGGDLF 92


>Z22176-2|CAD91716.2|  650|Caenorhabditis elegans Hypothetical
           protein ZK1098.2 protein.
          Length = 650

 Score = 27.1 bits (57), Expect = 6.1
 Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
 Frame = -1

Query: 261 SHNKSMAPYKYNDSHNSCFPSMSLITVSMFCWMNASS-CN*SMNTFRSI 118
           S + ++AP ++   +   FP MS I    FC M++   C  S    RS+
Sbjct: 575 SKDATLAPLEFWAKYQERFPRMSEIAAKNFCVMSSPGVCGPSFIVLRSL 623


>Z98853-4|CAB57905.1|  301|Caenorhabditis elegans Hypothetical
           protein R08A2.4 protein.
          Length = 301

 Score = 26.6 bits (56), Expect = 8.1
 Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 6/48 (12%)
 Frame = -3

Query: 196 VFDNSFHVLLDERFILQL------IYEYIQINNILIYVFK*KIKTCNY 71
           +F+   H+L  +R  LQ+      + EY+Q   +L Y+    +KT N+
Sbjct: 128 IFEELVHILKAKRRFLQVETIDISLLEYLQAVQVLTYIHPETLKTLNF 175


>U51999-6|AAV28361.1|  380|Caenorhabditis elegans Hypothetical
           protein C43H6.1 protein.
          Length = 380

 Score = 26.6 bits (56), Expect = 8.1
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -1

Query: 276 PGINRSHNKSMAPYKYNDSHNSCFPSMSL 190
           PGI     +S   ++Y D+ N  FPS  L
Sbjct: 37  PGIKEDFIRSPIEHRYQDTFNKFFPSYDL 65


>U23181-3|AAR12989.1|   80|Caenorhabditis elegans Insulin related
           protein 20 protein.
          Length = 80

 Score = 26.6 bits (56), Expect = 8.1
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +3

Query: 162 SSNKTWKLLSKTLKENNYCVNHYICMGPC 248
           SS + WK+L++ LKE  +  +H+   G C
Sbjct: 8   SSKEAWKMLNELLKEPKHHHHHHRHKGYC 36


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,195,959
Number of Sequences: 27780
Number of extensions: 176726
Number of successful extensions: 425
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 412
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 425
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 767282256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)