Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS302C10f
         (444 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.              23   1.1  
DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.              23   1.1  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                21   4.6  

>DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.
          Length = 135

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = -3

Query: 208 FSFNVFDNSFHVLLDERFILQLIYEYIQINNILIYVFK*KIKTC 77
           F  N+      + LDE  I +L+ E   I++  IY+   K+  C
Sbjct: 79  FKENIVQELTSIYLDENVIKKLVAECSVISDANIYIRFNKLVKC 122


>DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.
          Length = 135

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = -3

Query: 208 FSFNVFDNSFHVLLDERFILQLIYEYIQINNILIYVFK*KIKTC 77
           F  N+      + LDE  I +L+ E   I++  IY+   K+  C
Sbjct: 79  FKENIVQELTSIYLDENVIKKLVAECSVISDANIYIRFNKLVKC 122


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.4 bits (43), Expect = 4.6
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +3

Query: 162 SSNKTWKLLSKTLKENNYC 218
           S+   W+ L K L++  YC
Sbjct: 456 STTYLWEFLLKLLQDREYC 474


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,558
Number of Sequences: 438
Number of extensions: 2241
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11574126
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)