Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS302C07f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 243 7e-65
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 243 7e-65
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 243 7e-65
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 243 7e-65
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 147 4e-36
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 147 4e-36
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 138 2e-33
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 132 1e-31
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 70 9e-13
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 70 9e-13
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 70 9e-13
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 67 6e-12
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 67 6e-12
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 55 3e-08
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 54 8e-08
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 50 1e-06
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 43 2e-04
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 42 2e-04
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 38 0.006
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 38 0.006
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 32 0.016
L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding pro... 31 0.50
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 31 0.50
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 31 0.66
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 31 0.66
Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical p... 29 1.5
Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical p... 29 1.5
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 29 2.7
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 28 3.5
Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical pr... 27 6.2
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 27 6.2
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 27 8.1
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 243 bits (594), Expect = 7e-65
Identities = 111/115 (96%), Positives = 114/115 (99%)
Frame = +2
Query: 176 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 355
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 356 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 520
DKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLV 115
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 243 bits (594), Expect = 7e-65
Identities = 111/115 (96%), Positives = 114/115 (99%)
Frame = +2
Query: 176 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 355
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 356 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 520
DKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLV 115
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 243 bits (594), Expect = 7e-65
Identities = 111/115 (96%), Positives = 114/115 (99%)
Frame = +2
Query: 176 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 355
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 356 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 520
DKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLV 115
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 243 bits (594), Expect = 7e-65
Identities = 111/115 (96%), Positives = 114/115 (99%)
Frame = +2
Query: 176 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 355
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 356 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 520
DKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLV 115
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 147 bits (357), Expect = 4e-36
Identities = 65/112 (58%), Positives = 85/112 (75%)
Frame = +2
Query: 185 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 364
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 167 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 226
Query: 365 KAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 520
+ ERERG+T+DI FETS + ++DAPGH+DFI NMITGTSQAD A+L+
Sbjct: 227 EEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILV 278
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 147 bits (357), Expect = 4e-36
Identities = 65/112 (58%), Positives = 85/112 (75%)
Frame = +2
Query: 185 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 364
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 185 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 244
Query: 365 KAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 520
+ ERERG+T+DI FETS + ++DAPGH+DFI NMITGTSQAD A+L+
Sbjct: 245 EEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILV 296
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 138 bits (335), Expect = 2e-33
Identities = 63/67 (94%), Positives = 64/67 (95%)
Frame = +2
Query: 176 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 355
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 356 DKLKAER 376
DKLK +
Sbjct: 61 DKLKVTK 67
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 132 bits (320), Expect = 1e-31
Identities = 58/114 (50%), Positives = 82/114 (71%)
Frame = +2
Query: 179 GKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 358
G K HIN+V +GHVD+GKST G L++ G +DKRT+EK+E+EA+E G+ S+ +W +D
Sbjct: 104 GTHKEHINMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMD 163
Query: 359 KLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 520
ERE+G T+++ FET K + TI+DAPGH+ F+ NMI G +QAD AVL+
Sbjct: 164 TNDEEREKGKTVEVGRAYFETEKRHFTILDAPGHKSFVPNMIVGANQADLAVLV 217
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 70.1 bits (164), Expect = 9e-13
Identities = 40/113 (35%), Positives = 59/113 (52%)
Frame = +2
Query: 182 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 361
++K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 45 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 89
Query: 362 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 520
E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+
Sbjct: 90 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILV 142
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 70.1 bits (164), Expect = 9e-13
Identities = 40/113 (35%), Positives = 59/113 (52%)
Frame = +2
Query: 182 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 361
++K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 90
Query: 362 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 520
E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+
Sbjct: 91 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILV 143
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 70.1 bits (164), Expect = 9e-13
Identities = 40/113 (35%), Positives = 59/113 (52%)
Frame = +2
Query: 182 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 361
++K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 90
Query: 362 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 520
E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+
Sbjct: 91 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILV 143
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 67.3 bits (157), Expect = 6e-12
Identities = 44/113 (38%), Positives = 62/113 (54%), Gaps = 2/113 (1%)
Frame = +2
Query: 188 KTHINIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 361
K ++N+ IGH+D GK+T T + + G K KF++ +DK
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE---------------IDK 85
Query: 362 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 520
K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL+
Sbjct: 86 GKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLV 138
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 67.3 bits (157), Expect = 6e-12
Identities = 44/113 (38%), Positives = 62/113 (54%), Gaps = 2/113 (1%)
Frame = +2
Query: 188 KTHINIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 361
K ++N+ IGH+D GK+T T + + G K KF++ +DK
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE---------------IDK 85
Query: 362 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 520
K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL+
Sbjct: 86 GKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLV 138
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 55.2 bits (127), Expect = 3e-08
Identities = 36/90 (40%), Positives = 46/90 (51%)
Frame = +2
Query: 200 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 379
NI VI HVD+GK+T T L+Y G I A + KG+ V D L ERE
Sbjct: 27 NIGVIAHVDAGKTTVTERLLYLAGAIHV---------AGHVDKGNT----VTDFLDIERE 73
Query: 380 RGITIDIALWKFETSKYYVTIIDAPGHRDF 469
RGIT+ A + + + +ID PGH DF
Sbjct: 74 RGITVQSAAVNLDWKGHRINLIDTPGHVDF 103
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 53.6 bits (123), Expect = 8e-08
Identities = 36/107 (33%), Positives = 50/107 (46%)
Frame = +2
Query: 200 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 379
NI + H+DSGK+T T ++Y G ID E+ +G +D + ER+
Sbjct: 46 NIGISAHIDSGKTTVTERILYYAGRIDSM---------HEV-RGKDDVGATMDFMDLERQ 95
Query: 380 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 520
RGITI A + + IID PGH DF + D AVL+
Sbjct: 96 RGITIQSAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLV 142
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 49.6 bits (113), Expect = 1e-06
Identities = 33/107 (30%), Positives = 48/107 (44%)
Frame = +2
Query: 200 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 379
N ++ HVD GKST L+ CG + +K+ +LDKL+ ERE
Sbjct: 44 NFGIVAHVDHGKSTLADRLLEMCGAVPPG-----QKQ-------------MLDKLQVERE 85
Query: 380 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 520
RGIT+ Y + +ID PGH DF + + D +L+
Sbjct: 86 RGITVKAQTAALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLL 132
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 42.7 bits (96), Expect = 2e-04
Identities = 36/128 (28%), Positives = 61/128 (47%), Gaps = 13/128 (10%)
Frame = +2
Query: 176 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGI--DKRTIEKF---EKEAQE----MGK 328
M +++ N+ VI HVD GKST T L+ K G I K +F K+ QE +
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKS 72
Query: 329 GSFKYAWVLDKLKAERERG----ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTS 496
+ + L+K E +G T+++ K + + + + +ID+PGH DF +
Sbjct: 73 TAISLFFELEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALG 132
Query: 497 QADCAVLI 520
D A+++
Sbjct: 133 VTDGALVV 140
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 42.3 bits (95), Expect = 2e-04
Identities = 36/128 (28%), Positives = 61/128 (47%), Gaps = 13/128 (10%)
Frame = +2
Query: 176 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGI--DKRTIEKF---EKEAQE----MGK 328
M +++ N+ VI HVD GKST T L+ K G I K +F K+ QE +
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKS 72
Query: 329 GSFKYAWVLDKLKAERERG----ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTS 496
+ + L+K E +G T+++ K + + + + +ID+PGH DF +
Sbjct: 73 TAISLFFELEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALR 132
Query: 497 QADCAVLI 520
D A+++
Sbjct: 133 VTDGALVV 140
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 37.5 bits (83), Expect = 0.006
Identities = 30/114 (26%), Positives = 50/114 (43%), Gaps = 1/114 (0%)
Frame = +2
Query: 182 KEKTHI-NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 358
K HI N+ ++ HVD GK++ L+ I R G +Y +D
Sbjct: 15 KPAEHIRNVCLVAHVDHGKTSFADSLVSANAVISSRMA------------GKLRY---MD 59
Query: 359 KLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 520
+ E+ RGIT+ + + +ID+PGH DF + + +D A+L+
Sbjct: 60 SREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLL 113
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 37.5 bits (83), Expect = 0.006
Identities = 30/114 (26%), Positives = 50/114 (43%), Gaps = 1/114 (0%)
Frame = +2
Query: 182 KEKTHI-NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 358
K HI N+ ++ HVD GK++ L+ I R G +Y +D
Sbjct: 15 KPAEHIRNVCLVAHVDHGKTSFADSLVSANAVISSRMA------------GKLRY---MD 59
Query: 359 KLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 520
+ E+ RGIT+ + + +ID+PGH DF + + +D A+L+
Sbjct: 60 SREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLL 113
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 31.9 bits (69), Expect(2) = 0.016
Identities = 22/67 (32%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Frame = +2
Query: 323 GKGSFKYAWVLDKLKAERERGITIDIALWKFETSK-YYVTIIDAPGHRDFIKNMITGTSQ 499
GK + A ++ A GIT I + E +K VT +D PGH F G
Sbjct: 168 GKTTLLDAMRNSQIAAGEFGGITQHIGAFSVELTKGRRVTFLDTPGHAAFASMRARGAKG 227
Query: 500 ADCAVLI 520
AD VL+
Sbjct: 228 ADIVVLV 234
Score = 23.0 bits (47), Expect(2) = 0.016
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +2
Query: 203 IVVIGHVDSGKST 241
+ ++GHVD GK+T
Sbjct: 159 VTIMGHVDHGKTT 171
>L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding
protein protein.
Length = 593
Score = 31.1 bits (67), Expect = 0.50
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +2
Query: 152 FVIRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIY 262
++IRD P K+ + V+G+VD+GKST G L +
Sbjct: 127 WIIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 31.1 bits (67), Expect = 0.50
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +2
Query: 152 FVIRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIY 262
++IRD P K+ + V+G+VD+GKST G L +
Sbjct: 127 WIIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 30.7 bits (66), Expect = 0.66
Identities = 25/107 (23%), Positives = 44/107 (41%)
Frame = +2
Query: 200 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 379
N+ + GH+ GK+T L+ ++T +F + E F ++K +
Sbjct: 134 NVAIAGHLHHGKTTFLDCLM-------EQTHPEFYRA--EDADARFTDILFIEKQRGCSI 184
Query: 380 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 520
+ + I + Y + IID PGH +F M AD V++
Sbjct: 185 KSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVM 231
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 30.7 bits (66), Expect = 0.66
Identities = 25/107 (23%), Positives = 44/107 (41%)
Frame = +2
Query: 200 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 379
N+ + GH+ GK+T L+ ++T +F + E F ++K +
Sbjct: 9 NVAIAGHLHHGKTTFLDCLM-------EQTHPEFYRA--EDADARFTDILFIEKQRGCSI 59
Query: 380 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 520
+ + I + Y + IID PGH +F M AD V++
Sbjct: 60 KSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVM 106
>Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical
protein F54D5.5b protein.
Length = 492
Score = 29.5 bits (63), Expect = 1.5
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 278 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 379
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 272 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 305
>Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical
protein F54D5.5a protein.
Length = 427
Score = 29.5 bits (63), Expect = 1.5
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 278 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 379
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 207 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 240
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 28.7 bits (61), Expect = 2.7
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +2
Query: 197 INIVVIGHVDSGKSTTT 247
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 28.7 bits (61), Expect = 2.7
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +2
Query: 197 INIVVIGHVDSGKSTTT 247
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 28.3 bits (60), Expect = 3.5
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +2
Query: 440 IIDAPGHRDFIKNMITGTSQADCAVLI 520
IID PGH F G+S D A+L+
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILV 579
>Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical
protein T04H1.2 protein.
Length = 588
Score = 27.5 bits (58), Expect = 6.2
Identities = 34/123 (27%), Positives = 52/123 (42%), Gaps = 6/123 (4%)
Frame = +2
Query: 140 TRTQFVIRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKC--GGIDKRTIEKFEKEA 313
T + ++R P+ ++ + + V+G D GKST G L C G K I F +
Sbjct: 151 TVVEVLVRKVPE-SQQFIEVRLAVVGGCDVGKSTLCGVLTQGCLDDGNGKARIGIF-RFP 208
Query: 314 QEMGKGSFKYAWVLDKLKAERERGITIDIALWKF----ETSKYYVTIIDAPGHRDFIKNM 481
E+ G K + V + + RG ++ A E S VT+ID G + K
Sbjct: 209 HEVRTG--KTSSVCNDVIGFDNRGKLVNYAQNSLEEMVEKSSKLVTLIDLAGDAKYQKTT 266
Query: 482 ITG 490
I G
Sbjct: 267 IHG 269
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 27.5 bits (58), Expect = 6.2
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +2
Query: 431 YVTIIDAPGHRDFIKNMITGTSQADCAVLI 520
+V+ +D PGH + M+ G + D A L+
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLL 157
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 27.1 bits (57), Expect = 8.1
Identities = 14/25 (56%), Positives = 17/25 (68%), Gaps = 2/25 (8%)
Frame = +2
Query: 434 VTIIDAPGHRDFI--KNMITGTSQA 502
V IID+ G RDFI KN+ GT+ A
Sbjct: 73 VQIIDSSGSRDFIGMKNLYIGTADA 97
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,715,219
Number of Sequences: 27780
Number of extensions: 235454
Number of successful extensions: 663
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 625
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 655
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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