Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS302C06f
(521 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT011442-1|AAR99100.1| 147|Drosophila melanogaster RE59709p pro... 241 4e-64
AE014297-4525|AAN14210.1| 147|Drosophila melanogaster CG7939-PC... 241 4e-64
Y13939-1|CAA74278.1| 134|Drosophila melanogaster ribosomal prot... 238 4e-63
U92431-1|AAB51389.1| 134|Drosophila melanogaster ribosomal prot... 238 4e-63
AY070656-1|AAL48127.1| 134|Drosophila melanogaster RH03940p pro... 238 4e-63
AE014297-4527|AAN14211.1| 134|Drosophila melanogaster CG7939-PB... 238 4e-63
AE014297-4526|AAF57001.1| 134|Drosophila melanogaster CG7939-PA... 238 4e-63
X00848-1|CAA25404.1| 133|Drosophila melanogaster ribosomal prot... 182 3e-46
BT030157-1|ABN49296.1| 126|Drosophila melanogaster IP17707p pro... 59 4e-09
AY113651-1|AAM29656.1| 1019|Drosophila melanogaster SD13650p pro... 29 3.8
AY069273-1|AAL39418.1| 421|Drosophila melanogaster GM10003p pro... 29 3.8
AL021106-10|CAA15944.1| 2422|Drosophila melanogaster EG:63B12.3 ... 29 3.8
AE014298-281|AAN09063.2| 2431|Drosophila melanogaster CG3848-PD,... 29 3.8
AE014298-280|AAF45684.2| 2410|Drosophila melanogaster CG3848-PC,... 29 3.8
AY071032-1|AAL48654.1| 216|Drosophila melanogaster RE11385p pro... 28 8.8
AE014297-3349|AAF56156.1| 216|Drosophila melanogaster CG13822-P... 28 8.8
>BT011442-1|AAR99100.1| 147|Drosophila melanogaster RE59709p
protein.
Length = 147
Score = 241 bits (590), Expect = 4e-64
Identities = 110/136 (80%), Positives = 120/136 (88%)
Frame = -1
Query: 443 YKMAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIG 264
+KM IRP YRP IVKKRTK FIRHQSDRY KL WRKP+GIDNRVRRRFKGQYLMPNIG
Sbjct: 12 FKMTIRPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIG 71
Query: 263 YGSNKKTRHMLPNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLS 84
YGSNK+TRHMLP GF+K LVHNV+ELE+L+MQNR YC EIAHGVSSKKRK IVERA+QLS
Sbjct: 72 YGSNKRTRHMLPTGFKKFLVHNVRELEVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLS 131
Query: 83 IRVTNAAARLRSQENE 36
+R+TN RLRSQENE
Sbjct: 132 VRLTNPNGRLRSQENE 147
>AE014297-4525|AAN14210.1| 147|Drosophila melanogaster CG7939-PC,
isoform C protein.
Length = 147
Score = 241 bits (590), Expect = 4e-64
Identities = 110/136 (80%), Positives = 120/136 (88%)
Frame = -1
Query: 443 YKMAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIG 264
+KM IRP YRP IVKKRTK FIRHQSDRY KL WRKP+GIDNRVRRRFKGQYLMPNIG
Sbjct: 12 FKMTIRPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIG 71
Query: 263 YGSNKKTRHMLPNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLS 84
YGSNK+TRHMLP GF+K LVHNV+ELE+L+MQNR YC EIAHGVSSKKRK IVERA+QLS
Sbjct: 72 YGSNKRTRHMLPTGFKKFLVHNVRELEVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLS 131
Query: 83 IRVTNAAARLRSQENE 36
+R+TN RLRSQENE
Sbjct: 132 VRLTNPNGRLRSQENE 147
>Y13939-1|CAA74278.1| 134|Drosophila melanogaster ribosomal protein
49 protein.
Length = 134
Score = 238 bits (582), Expect = 4e-63
Identities = 109/134 (81%), Positives = 118/134 (88%)
Frame = -1
Query: 437 MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYG 258
M IRP YRP IVKKRTK FIRHQSDRY KL WRKP+GIDNRVRRRFKGQYLMPNIGYG
Sbjct: 1 MTIRPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYG 60
Query: 257 SNKKTRHMLPNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIR 78
SNK+TRHMLP GF+K LVHNV+ELE+L+MQNR YC EIAHGVSSKKRK IVERA+QLS+R
Sbjct: 61 SNKRTRHMLPTGFKKFLVHNVRELEVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSVR 120
Query: 77 VTNAAARLRSQENE 36
+TN RLRSQENE
Sbjct: 121 LTNPNGRLRSQENE 134
>U92431-1|AAB51389.1| 134|Drosophila melanogaster ribosomal protein
49 protein.
Length = 134
Score = 238 bits (582), Expect = 4e-63
Identities = 109/134 (81%), Positives = 118/134 (88%)
Frame = -1
Query: 437 MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYG 258
M IRP YRP IVKKRTK FIRHQSDRY KL WRKP+GIDNRVRRRFKGQYLMPNIGYG
Sbjct: 1 MTIRPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYG 60
Query: 257 SNKKTRHMLPNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIR 78
SNK+TRHMLP GF+K LVHNV+ELE+L+MQNR YC EIAHGVSSKKRK IVERA+QLS+R
Sbjct: 61 SNKRTRHMLPTGFKKFLVHNVRELEVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSVR 120
Query: 77 VTNAAARLRSQENE 36
+TN RLRSQENE
Sbjct: 121 LTNPNGRLRSQENE 134
>AY070656-1|AAL48127.1| 134|Drosophila melanogaster RH03940p
protein.
Length = 134
Score = 238 bits (582), Expect = 4e-63
Identities = 109/134 (81%), Positives = 118/134 (88%)
Frame = -1
Query: 437 MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYG 258
M IRP YRP IVKKRTK FIRHQSDRY KL WRKP+GIDNRVRRRFKGQYLMPNIGYG
Sbjct: 1 MTIRPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYG 60
Query: 257 SNKKTRHMLPNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIR 78
SNK+TRHMLP GF+K LVHNV+ELE+L+MQNR YC EIAHGVSSKKRK IVERA+QLS+R
Sbjct: 61 SNKRTRHMLPTGFKKFLVHNVRELEVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSVR 120
Query: 77 VTNAAARLRSQENE 36
+TN RLRSQENE
Sbjct: 121 LTNPNGRLRSQENE 134
>AE014297-4527|AAN14211.1| 134|Drosophila melanogaster CG7939-PB,
isoform B protein.
Length = 134
Score = 238 bits (582), Expect = 4e-63
Identities = 109/134 (81%), Positives = 118/134 (88%)
Frame = -1
Query: 437 MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYG 258
M IRP YRP IVKKRTK FIRHQSDRY KL WRKP+GIDNRVRRRFKGQYLMPNIGYG
Sbjct: 1 MTIRPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYG 60
Query: 257 SNKKTRHMLPNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIR 78
SNK+TRHMLP GF+K LVHNV+ELE+L+MQNR YC EIAHGVSSKKRK IVERA+QLS+R
Sbjct: 61 SNKRTRHMLPTGFKKFLVHNVRELEVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSVR 120
Query: 77 VTNAAARLRSQENE 36
+TN RLRSQENE
Sbjct: 121 LTNPNGRLRSQENE 134
>AE014297-4526|AAF57001.1| 134|Drosophila melanogaster CG7939-PA,
isoform A protein.
Length = 134
Score = 238 bits (582), Expect = 4e-63
Identities = 109/134 (81%), Positives = 118/134 (88%)
Frame = -1
Query: 437 MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYG 258
M IRP YRP IVKKRTK FIRHQSDRY KL WRKP+GIDNRVRRRFKGQYLMPNIGYG
Sbjct: 1 MTIRPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYG 60
Query: 257 SNKKTRHMLPNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIR 78
SNK+TRHMLP GF+K LVHNV+ELE+L+MQNR YC EIAHGVSSKKRK IVERA+QLS+R
Sbjct: 61 SNKRTRHMLPTGFKKFLVHNVRELEVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSVR 120
Query: 77 VTNAAARLRSQENE 36
+TN RLRSQENE
Sbjct: 121 LTNPNGRLRSQENE 134
>X00848-1|CAA25404.1| 133|Drosophila melanogaster ribosomal protein
49 protein.
Length = 133
Score = 182 bits (442), Expect = 3e-46
Identities = 85/120 (70%), Positives = 97/120 (80%)
Frame = -1
Query: 437 MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYG 258
M IRP YRP IVKKRTK FIRHQSDRY KL WRKP+GIDNRV RRFKGQYLMPNIGYG
Sbjct: 1 MTIRPAYRPKIVKKRTKDFIRHQSDRYAKLSHKWRKPKGIDNRVGRRFKGQYLMPNIGYG 60
Query: 257 SNKKTRHMLPNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIR 78
SNK+TRHMLP GF+K LVHNV+ELE+L+MQN + E+ S + K I+ERA+QLS+R
Sbjct: 61 SNKRTRHMLPTGFKKFLVHNVRELEVLLMQNPRLLREMP-TASPPRSKEIIERAKQLSLR 119
>BT030157-1|ABN49296.1| 126|Drosophila melanogaster IP17707p
protein.
Length = 126
Score = 58.8 bits (136), Expect = 4e-09
Identities = 37/98 (37%), Positives = 51/98 (52%)
Frame = -3
Query: 321 Y*QQSPQAVQGSILDAQHWLRFQQEDPSYAPKWIP*GPSSQC*RAGNLDDAKQEVLRRDR 142
Y QQS +QG++ DAQH LR +Q P +A I P +Q RAG A+ +LRRDR
Sbjct: 7 YRQQSASPLQGTVSDAQHRLRIEQAHPPHAAHRIQEVPGAQRARAGGPAHAEPRLLRRDR 66
Query: 141 SWCLFEEAEADRGKSPAAQHQSDECGRSPPLPGE*INI 28
L +EA+ D AA + RSP E +++
Sbjct: 67 PRRLLQEAQGDCRARQAAVGPPHQPQRSPAFSRERVSL 104
>AY113651-1|AAM29656.1| 1019|Drosophila melanogaster SD13650p
protein.
Length = 1019
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = -1
Query: 488 RRPTRENTVAFLKETYKMAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWR 333
R+P + T T +MA + +K+F+ +S +Y K+K+ WR
Sbjct: 828 RKPHTQRTAGSCS-TQRMANSAAIAGEVACPYSKQFVHSKSSQYKKMKQEWR 878
>AY069273-1|AAL39418.1| 421|Drosophila melanogaster GM10003p
protein.
Length = 421
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = -1
Query: 488 RRPTRENTVAFLKETYKMAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWR 333
R+P + T T +MA + +K+F+ +S +Y K+K+ WR
Sbjct: 230 RKPHTQRTAGSCS-TQRMANSAAIAGEVACPYSKQFVHSKSSQYKKMKQEWR 280
>AL021106-10|CAA15944.1| 2422|Drosophila melanogaster EG:63B12.3
protein.
Length = 2422
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = -1
Query: 488 RRPTRENTVAFLKETYKMAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWR 333
R+P + T T +MA + +K+F+ +S +Y K+K+ WR
Sbjct: 2231 RKPHTQRTAGSCS-TQRMANSAAIAGEVACPYSKQFVHSKSSQYKKMKQEWR 2281
>AE014298-281|AAN09063.2| 2431|Drosophila melanogaster CG3848-PD,
isoform D protein.
Length = 2431
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = -1
Query: 488 RRPTRENTVAFLKETYKMAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWR 333
R+P + T T +MA + +K+F+ +S +Y K+K+ WR
Sbjct: 2240 RKPHTQRTAGSCS-TQRMANSAAIAGEVACPYSKQFVHSKSSQYKKMKQEWR 2290
>AE014298-280|AAF45684.2| 2410|Drosophila melanogaster CG3848-PC,
isoform C protein.
Length = 2410
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = -1
Query: 488 RRPTRENTVAFLKETYKMAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWR 333
R+P + T T +MA + +K+F+ +S +Y K+K+ WR
Sbjct: 2219 RKPHTQRTAGSCS-TQRMANSAAIAGEVACPYSKQFVHSKSSQYKKMKQEWR 2269
>AY071032-1|AAL48654.1| 216|Drosophila melanogaster RE11385p
protein.
Length = 216
Score = 27.9 bits (59), Expect = 8.8
Identities = 26/78 (33%), Positives = 33/78 (42%)
Frame = -1
Query: 512 SPSNECRRRRPTRENTVAFLKETYKMAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWR 333
S + EC+ R T E + KET K+ I + PTIV + D YD+
Sbjct: 142 SKARECKASRTTAEILAPYGKETLKLGIS--FVPTIV-------FENDFDPYDQ------ 186
Query: 332 KPRGIDNRVRRRFKGQYL 279
R I N R F QYL
Sbjct: 187 --RSIRNNFERHFCRQYL 202
>AE014297-3349|AAF56156.1| 216|Drosophila melanogaster CG13822-PA
protein.
Length = 216
Score = 27.9 bits (59), Expect = 8.8
Identities = 26/78 (33%), Positives = 33/78 (42%)
Frame = -1
Query: 512 SPSNECRRRRPTRENTVAFLKETYKMAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWR 333
S + EC+ R T E + KET K+ I + PTIV + D YD+
Sbjct: 142 SKARECKASRTTAEILAPYGKETLKLGIS--FVPTIV-------FENDFDPYDQ------ 186
Query: 332 KPRGIDNRVRRRFKGQYL 279
R I N R F QYL
Sbjct: 187 --RSIRNNFERHFCRQYL 202
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,348,583
Number of Sequences: 53049
Number of extensions: 469007
Number of successful extensions: 1573
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1518
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1572
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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