BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ovS302C06f (521 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BT011442-1|AAR99100.1| 147|Drosophila melanogaster RE59709p pro... 241 4e-64 AE014297-4525|AAN14210.1| 147|Drosophila melanogaster CG7939-PC... 241 4e-64 Y13939-1|CAA74278.1| 134|Drosophila melanogaster ribosomal prot... 238 4e-63 U92431-1|AAB51389.1| 134|Drosophila melanogaster ribosomal prot... 238 4e-63 AY070656-1|AAL48127.1| 134|Drosophila melanogaster RH03940p pro... 238 4e-63 AE014297-4527|AAN14211.1| 134|Drosophila melanogaster CG7939-PB... 238 4e-63 AE014297-4526|AAF57001.1| 134|Drosophila melanogaster CG7939-PA... 238 4e-63 X00848-1|CAA25404.1| 133|Drosophila melanogaster ribosomal prot... 182 3e-46 BT030157-1|ABN49296.1| 126|Drosophila melanogaster IP17707p pro... 59 4e-09 AY113651-1|AAM29656.1| 1019|Drosophila melanogaster SD13650p pro... 29 3.8 AY069273-1|AAL39418.1| 421|Drosophila melanogaster GM10003p pro... 29 3.8 AL021106-10|CAA15944.1| 2422|Drosophila melanogaster EG:63B12.3 ... 29 3.8 AE014298-281|AAN09063.2| 2431|Drosophila melanogaster CG3848-PD,... 29 3.8 AE014298-280|AAF45684.2| 2410|Drosophila melanogaster CG3848-PC,... 29 3.8 AY071032-1|AAL48654.1| 216|Drosophila melanogaster RE11385p pro... 28 8.8 AE014297-3349|AAF56156.1| 216|Drosophila melanogaster CG13822-P... 28 8.8 >BT011442-1|AAR99100.1| 147|Drosophila melanogaster RE59709p protein. Length = 147 Score = 241 bits (590), Expect = 4e-64 Identities = 110/136 (80%), Positives = 120/136 (88%) Frame = -1 Query: 443 YKMAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIG 264 +KM IRP YRP IVKKRTK FIRHQSDRY KL WRKP+GIDNRVRRRFKGQYLMPNIG Sbjct: 12 FKMTIRPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIG 71 Query: 263 YGSNKKTRHMLPNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLS 84 YGSNK+TRHMLP GF+K LVHNV+ELE+L+MQNR YC EIAHGVSSKKRK IVERA+QLS Sbjct: 72 YGSNKRTRHMLPTGFKKFLVHNVRELEVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLS 131 Query: 83 IRVTNAAARLRSQENE 36 +R+TN RLRSQENE Sbjct: 132 VRLTNPNGRLRSQENE 147 >AE014297-4525|AAN14210.1| 147|Drosophila melanogaster CG7939-PC, isoform C protein. Length = 147 Score = 241 bits (590), Expect = 4e-64 Identities = 110/136 (80%), Positives = 120/136 (88%) Frame = -1 Query: 443 YKMAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIG 264 +KM IRP YRP IVKKRTK FIRHQSDRY KL WRKP+GIDNRVRRRFKGQYLMPNIG Sbjct: 12 FKMTIRPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIG 71 Query: 263 YGSNKKTRHMLPNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLS 84 YGSNK+TRHMLP GF+K LVHNV+ELE+L+MQNR YC EIAHGVSSKKRK IVERA+QLS Sbjct: 72 YGSNKRTRHMLPTGFKKFLVHNVRELEVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLS 131 Query: 83 IRVTNAAARLRSQENE 36 +R+TN RLRSQENE Sbjct: 132 VRLTNPNGRLRSQENE 147 >Y13939-1|CAA74278.1| 134|Drosophila melanogaster ribosomal protein 49 protein. Length = 134 Score = 238 bits (582), Expect = 4e-63 Identities = 109/134 (81%), Positives = 118/134 (88%) Frame = -1 Query: 437 MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYG 258 M IRP YRP IVKKRTK FIRHQSDRY KL WRKP+GIDNRVRRRFKGQYLMPNIGYG Sbjct: 1 MTIRPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYG 60 Query: 257 SNKKTRHMLPNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIR 78 SNK+TRHMLP GF+K LVHNV+ELE+L+MQNR YC EIAHGVSSKKRK IVERA+QLS+R Sbjct: 61 SNKRTRHMLPTGFKKFLVHNVRELEVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSVR 120 Query: 77 VTNAAARLRSQENE 36 +TN RLRSQENE Sbjct: 121 LTNPNGRLRSQENE 134 >U92431-1|AAB51389.1| 134|Drosophila melanogaster ribosomal protein 49 protein. Length = 134 Score = 238 bits (582), Expect = 4e-63 Identities = 109/134 (81%), Positives = 118/134 (88%) Frame = -1 Query: 437 MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYG 258 M IRP YRP IVKKRTK FIRHQSDRY KL WRKP+GIDNRVRRRFKGQYLMPNIGYG Sbjct: 1 MTIRPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYG 60 Query: 257 SNKKTRHMLPNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIR 78 SNK+TRHMLP GF+K LVHNV+ELE+L+MQNR YC EIAHGVSSKKRK IVERA+QLS+R Sbjct: 61 SNKRTRHMLPTGFKKFLVHNVRELEVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSVR 120 Query: 77 VTNAAARLRSQENE 36 +TN RLRSQENE Sbjct: 121 LTNPNGRLRSQENE 134 >AY070656-1|AAL48127.1| 134|Drosophila melanogaster RH03940p protein. Length = 134 Score = 238 bits (582), Expect = 4e-63 Identities = 109/134 (81%), Positives = 118/134 (88%) Frame = -1 Query: 437 MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYG 258 M IRP YRP IVKKRTK FIRHQSDRY KL WRKP+GIDNRVRRRFKGQYLMPNIGYG Sbjct: 1 MTIRPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYG 60 Query: 257 SNKKTRHMLPNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIR 78 SNK+TRHMLP GF+K LVHNV+ELE+L+MQNR YC EIAHGVSSKKRK IVERA+QLS+R Sbjct: 61 SNKRTRHMLPTGFKKFLVHNVRELEVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSVR 120 Query: 77 VTNAAARLRSQENE 36 +TN RLRSQENE Sbjct: 121 LTNPNGRLRSQENE 134 >AE014297-4527|AAN14211.1| 134|Drosophila melanogaster CG7939-PB, isoform B protein. Length = 134 Score = 238 bits (582), Expect = 4e-63 Identities = 109/134 (81%), Positives = 118/134 (88%) Frame = -1 Query: 437 MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYG 258 M IRP YRP IVKKRTK FIRHQSDRY KL WRKP+GIDNRVRRRFKGQYLMPNIGYG Sbjct: 1 MTIRPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYG 60 Query: 257 SNKKTRHMLPNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIR 78 SNK+TRHMLP GF+K LVHNV+ELE+L+MQNR YC EIAHGVSSKKRK IVERA+QLS+R Sbjct: 61 SNKRTRHMLPTGFKKFLVHNVRELEVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSVR 120 Query: 77 VTNAAARLRSQENE 36 +TN RLRSQENE Sbjct: 121 LTNPNGRLRSQENE 134 >AE014297-4526|AAF57001.1| 134|Drosophila melanogaster CG7939-PA, isoform A protein. Length = 134 Score = 238 bits (582), Expect = 4e-63 Identities = 109/134 (81%), Positives = 118/134 (88%) Frame = -1 Query: 437 MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYG 258 M IRP YRP IVKKRTK FIRHQSDRY KL WRKP+GIDNRVRRRFKGQYLMPNIGYG Sbjct: 1 MTIRPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYG 60 Query: 257 SNKKTRHMLPNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIR 78 SNK+TRHMLP GF+K LVHNV+ELE+L+MQNR YC EIAHGVSSKKRK IVERA+QLS+R Sbjct: 61 SNKRTRHMLPTGFKKFLVHNVRELEVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSVR 120 Query: 77 VTNAAARLRSQENE 36 +TN RLRSQENE Sbjct: 121 LTNPNGRLRSQENE 134 >X00848-1|CAA25404.1| 133|Drosophila melanogaster ribosomal protein 49 protein. Length = 133 Score = 182 bits (442), Expect = 3e-46 Identities = 85/120 (70%), Positives = 97/120 (80%) Frame = -1 Query: 437 MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYG 258 M IRP YRP IVKKRTK FIRHQSDRY KL WRKP+GIDNRV RRFKGQYLMPNIGYG Sbjct: 1 MTIRPAYRPKIVKKRTKDFIRHQSDRYAKLSHKWRKPKGIDNRVGRRFKGQYLMPNIGYG 60 Query: 257 SNKKTRHMLPNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIR 78 SNK+TRHMLP GF+K LVHNV+ELE+L+MQN + E+ S + K I+ERA+QLS+R Sbjct: 61 SNKRTRHMLPTGFKKFLVHNVRELEVLLMQNPRLLREMP-TASPPRSKEIIERAKQLSLR 119 >BT030157-1|ABN49296.1| 126|Drosophila melanogaster IP17707p protein. Length = 126 Score = 58.8 bits (136), Expect = 4e-09 Identities = 37/98 (37%), Positives = 51/98 (52%) Frame = -3 Query: 321 Y*QQSPQAVQGSILDAQHWLRFQQEDPSYAPKWIP*GPSSQC*RAGNLDDAKQEVLRRDR 142 Y QQS +QG++ DAQH LR +Q P +A I P +Q RAG A+ +LRRDR Sbjct: 7 YRQQSASPLQGTVSDAQHRLRIEQAHPPHAAHRIQEVPGAQRARAGGPAHAEPRLLRRDR 66 Query: 141 SWCLFEEAEADRGKSPAAQHQSDECGRSPPLPGE*INI 28 L +EA+ D AA + RSP E +++ Sbjct: 67 PRRLLQEAQGDCRARQAAVGPPHQPQRSPAFSRERVSL 104 >AY113651-1|AAM29656.1| 1019|Drosophila melanogaster SD13650p protein. Length = 1019 Score = 29.1 bits (62), Expect = 3.8 Identities = 14/52 (26%), Positives = 25/52 (48%) Frame = -1 Query: 488 RRPTRENTVAFLKETYKMAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWR 333 R+P + T T +MA + +K+F+ +S +Y K+K+ WR Sbjct: 828 RKPHTQRTAGSCS-TQRMANSAAIAGEVACPYSKQFVHSKSSQYKKMKQEWR 878 >AY069273-1|AAL39418.1| 421|Drosophila melanogaster GM10003p protein. Length = 421 Score = 29.1 bits (62), Expect = 3.8 Identities = 14/52 (26%), Positives = 25/52 (48%) Frame = -1 Query: 488 RRPTRENTVAFLKETYKMAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWR 333 R+P + T T +MA + +K+F+ +S +Y K+K+ WR Sbjct: 230 RKPHTQRTAGSCS-TQRMANSAAIAGEVACPYSKQFVHSKSSQYKKMKQEWR 280 >AL021106-10|CAA15944.1| 2422|Drosophila melanogaster EG:63B12.3 protein. Length = 2422 Score = 29.1 bits (62), Expect = 3.8 Identities = 14/52 (26%), Positives = 25/52 (48%) Frame = -1 Query: 488 RRPTRENTVAFLKETYKMAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWR 333 R+P + T T +MA + +K+F+ +S +Y K+K+ WR Sbjct: 2231 RKPHTQRTAGSCS-TQRMANSAAIAGEVACPYSKQFVHSKSSQYKKMKQEWR 2281 >AE014298-281|AAN09063.2| 2431|Drosophila melanogaster CG3848-PD, isoform D protein. Length = 2431 Score = 29.1 bits (62), Expect = 3.8 Identities = 14/52 (26%), Positives = 25/52 (48%) Frame = -1 Query: 488 RRPTRENTVAFLKETYKMAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWR 333 R+P + T T +MA + +K+F+ +S +Y K+K+ WR Sbjct: 2240 RKPHTQRTAGSCS-TQRMANSAAIAGEVACPYSKQFVHSKSSQYKKMKQEWR 2290 >AE014298-280|AAF45684.2| 2410|Drosophila melanogaster CG3848-PC, isoform C protein. Length = 2410 Score = 29.1 bits (62), Expect = 3.8 Identities = 14/52 (26%), Positives = 25/52 (48%) Frame = -1 Query: 488 RRPTRENTVAFLKETYKMAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWR 333 R+P + T T +MA + +K+F+ +S +Y K+K+ WR Sbjct: 2219 RKPHTQRTAGSCS-TQRMANSAAIAGEVACPYSKQFVHSKSSQYKKMKQEWR 2269 >AY071032-1|AAL48654.1| 216|Drosophila melanogaster RE11385p protein. Length = 216 Score = 27.9 bits (59), Expect = 8.8 Identities = 26/78 (33%), Positives = 33/78 (42%) Frame = -1 Query: 512 SPSNECRRRRPTRENTVAFLKETYKMAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWR 333 S + EC+ R T E + KET K+ I + PTIV + D YD+ Sbjct: 142 SKARECKASRTTAEILAPYGKETLKLGIS--FVPTIV-------FENDFDPYDQ------ 186 Query: 332 KPRGIDNRVRRRFKGQYL 279 R I N R F QYL Sbjct: 187 --RSIRNNFERHFCRQYL 202 >AE014297-3349|AAF56156.1| 216|Drosophila melanogaster CG13822-PA protein. Length = 216 Score = 27.9 bits (59), Expect = 8.8 Identities = 26/78 (33%), Positives = 33/78 (42%) Frame = -1 Query: 512 SPSNECRRRRPTRENTVAFLKETYKMAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWR 333 S + EC+ R T E + KET K+ I + PTIV + D YD+ Sbjct: 142 SKARECKASRTTAEILAPYGKETLKLGIS--FVPTIV-------FENDFDPYDQ------ 186 Query: 332 KPRGIDNRVRRRFKGQYL 279 R I N R F QYL Sbjct: 187 --RSIRNNFERHFCRQYL 202 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 22,348,583 Number of Sequences: 53049 Number of extensions: 469007 Number of successful extensions: 1573 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 1518 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1572 length of database: 24,988,368 effective HSP length: 80 effective length of database: 20,744,448 effective search space used: 1929233664 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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