Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS302C04f
(521 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_05_0009 - 17101633-17101836,17101948-17102040,17102122-171023... 69 2e-12
02_05_0782 - 31716860-31717150,31717400-31717612,31718497-317186... 66 1e-11
09_04_0008 + 13651997-13652072,13652440-13652541,13653138-136531... 62 3e-10
05_04_0139 + 18355597-18355696,18356665-18356778,18357118-183572... 61 5e-10
06_01_0830 + 6261629-6261704,6261829-6261974,6262086-6262310,626... 60 1e-09
08_02_0726 + 20452492-20453238,20453676-20453765,20453904-20454107 56 1e-08
09_03_0079 + 12142390-12142459,12142792-12143006,12143050-121432... 35 0.034
12_01_0471 - 3672309-3672740,3673159-3673251,3673271-3673399,367... 29 1.7
09_04_0202 - 15544498-15545037,15546043-15546449,15546874-155469... 29 2.3
10_01_0167 + 1876793-1877402,1877423-1877642,1877760-1879534,188... 28 5.2
03_05_0721 + 27134277-27134666,27135401-27135466,27137036-271371... 28 5.2
02_05_1224 + 35045268-35045270,35045735-35045863,35046037-350461... 28 5.2
>01_05_0009 -
17101633-17101836,17101948-17102040,17102122-17102334,
17102514-17102651,17102764-17102909,17106264-17106339
Length = 289
Score = 69.3 bits (162), Expect = 2e-12
Identities = 38/96 (39%), Positives = 56/96 (58%)
Frame = +3
Query: 162 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVA 341
L KA +G+GTDE+A+I VL R QR +I T++ NY ++LI L+SEL+G+LE +
Sbjct: 20 LLKAFQGWGTDEQAVIGVLAHRDATQRKQIRLTYEENYNENLIQRLQSELSGDLERAMYH 79
Query: 342 LMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSN 449
+ A ++ A I D I+EI CT S+
Sbjct: 80 WVLDPVERQAVMVNTATKCIHEDYAVIVEIACTNSS 115
Score = 35.5 bits (78), Expect = 0.026
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Frame = +3
Query: 321 LENVIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKS 500
+ ++V +TP P A L A G GTDE+A+I +L + I YE+ Y ++
Sbjct: 1 MATIVVPPVTPSPAEDADALLKAFQGWGTDEQAVIGVLAHRDATQRKQIRLTYEENYNEN 60
Query: 501 ----LESDLKG 521
L+S+L G
Sbjct: 61 LIQRLQSELSG 71
>02_05_0782 -
31716860-31717150,31717400-31717612,31718497-31718642,
31718742-31718817
Length = 241
Score = 66.5 bits (155), Expect = 1e-11
Identities = 44/130 (33%), Positives = 62/130 (47%), Gaps = 11/130 (8%)
Frame = +3
Query: 162 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVA 341
LRKA KG+GT+EK II +L R QR I + YG++L+ L E+ G E ++V
Sbjct: 20 LRKAFKGWGTNEKLIISILAHRDAAQRRAIRRAYAEAYGEELLRALNDEIHGKFE-LLVP 78
Query: 342 LM-----------TPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQL 488
L+ T L H AK LH+ + ++ II IL T S + Y
Sbjct: 79 LVTVYRYDGPEVNTSLAHSEAKILHEKIHDKAYSDDEIIRILTTRSKAQLLATFNSYNDQ 138
Query: 489 YGKSLESDLK 518
+G + DLK
Sbjct: 139 FGHPITKDLK 148
Score = 47.2 bits (107), Expect = 8e-06
Identities = 32/114 (28%), Positives = 53/114 (46%), Gaps = 4/114 (3%)
Frame = +3
Query: 177 KGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYG----KDLISELKSELTGNLENVIVAL 344
K + DE II +L R Q L ++ +G KDL ++ K E G L +I
Sbjct: 109 KAYSDDE--IIRILTTRSKAQLLATFNSYNDQFGHPITKDLKADPKDEFLGTLRAIIRCF 166
Query: 345 MTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLE 506
P ++ K + A+ G+GTDE ++ I+ T + ++ I Y++ LE
Sbjct: 167 TCP-DRYFEKVIRLALGGMGTDENSLTRIITTRAEVDLKLIKEAYQKRNSVPLE 219
Score = 32.3 bits (70), Expect = 0.24
Identities = 16/62 (25%), Positives = 32/62 (51%)
Frame = +3
Query: 162 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVA 341
+R A+ G GTDE ++ ++ R V I E ++ L + + T + E++++A
Sbjct: 177 IRLALGGMGTDENSLTRIITTRAEVDLKLIKEAYQKRNSVPLERAVAKDTTRDYEDILLA 236
Query: 342 LM 347
L+
Sbjct: 237 LL 238
Score = 29.1 bits (62), Expect = 2.3
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +3
Query: 372 KELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSL 503
++L A G GT+E+ II IL R I Y + YG+ L
Sbjct: 18 EQLRKAFKGWGTNEKLIISILAHRDAAQRRAIRRAYAEAYGEEL 61
>09_04_0008 +
13651997-13652072,13652440-13652541,13653138-13653142,
13653970-13654188,13654686-13654901,13654989-13655078,
13656307-13656507
Length = 302
Score = 62.1 bits (144), Expect = 3e-10
Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 3/112 (2%)
Frame = +3
Query: 177 KGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVALMTPL 356
K GTDEK I + R +A + Y + L +KSE +GN E ++ ++
Sbjct: 168 KRLGTDEKTFIRIFTERSWAHMASVASAYHHMYDRSLEKVVKSETSGNFELALLTILRCA 227
Query: 357 PH---FYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSL 503
+ ++AK L ++ G+GTD+ +I ++ T + ++ I A Y + Y KSL
Sbjct: 228 ENPAKYFAKVLRKSMKGMGTDDSTLIRVVVTRTEIDMQYIKAEYYKKYKKSL 279
Score = 43.6 bits (98), Expect = 1e-04
Identities = 32/132 (24%), Positives = 64/132 (48%), Gaps = 13/132 (9%)
Frame = +3
Query: 162 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVA 341
LR+A+ G D +A +++C R Q + +T+ +G L ++ +G+ + +++A
Sbjct: 79 LREALSGDTIDLRAATEIICSRTPSQLQIMKQTYHAKFGTYLEHDIGQRTSGDHQKLLLA 138
Query: 342 LMTPLPHFYAKEL------HDAVS-------GIGTDEEAIIEILCTLSNYGIRTISAFYE 482
+ +P + E+ HDA +GTDE+ I I S + ++++ Y
Sbjct: 139 YVG-IPRYEGPEVDPTIVTHDAKDLYKAGEKRLGTDEKTFIRIFTERSWAHMASVASAYH 197
Query: 483 QLYGKSLESDLK 518
+Y +SLE +K
Sbjct: 198 HMYDRSLEKVVK 209
Score = 43.2 bits (97), Expect = 1e-04
Identities = 21/62 (33%), Positives = 33/62 (53%)
Frame = +3
Query: 162 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVA 341
LRK+MKG GTD+ +I V+ R + I + Y K L + SE +GN +++
Sbjct: 238 LRKSMKGMGTDDSTLIRVVVTRTEIDMQYIKAEYYKKYKKSLAEAIHSETSGNYRTFLLS 297
Query: 342 LM 347
L+
Sbjct: 298 LV 299
>05_04_0139 +
18355597-18355696,18356665-18356778,18357118-18357263,
18357365-18357910,18358397-18358600
Length = 369
Score = 61.3 bits (142), Expect = 5e-10
Identities = 37/123 (30%), Positives = 63/123 (51%), Gaps = 4/123 (3%)
Frame = +3
Query: 159 TLRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIV 338
++RKA++G+GTDE A+I++L R QR EIA ++ Y + L+ L SEL+G+ + ++
Sbjct: 65 SIRKAVQGWGTDENALIEILGHRTAAQRAEIAVAYEGLYDETLLDRLHSELSGDFRSALM 124
Query: 339 ALMTPLPHFYAKELHDAVSGIGTDE----EAIIEILCTLSNYGIRTISAFYEQLYGKSLE 506
AK ++A+ E ++E+ C S + + Y Y SLE
Sbjct: 125 LWTMDPAARDAKLANEALKKKKKGELRHIWVLVEVACASSPDHLVAVRKAYRAAYASSLE 184
Query: 507 SDL 515
D+
Sbjct: 185 EDV 187
Score = 37.9 bits (84), Expect = 0.005
Identities = 23/110 (20%), Positives = 52/110 (47%), Gaps = 4/110 (3%)
Frame = +3
Query: 204 IIDVLCRRGIVQRLEIAETFKTNYGKDLISELKS----ELTGNLENVIVALMTPLPHFYA 371
++ ++ R Q E ++ +GK + L +L L+ + L +P HF A
Sbjct: 243 VVRIVGTRSKAQLAVTLERYRQEHGKGIDEVLDGRRGDQLAAVLKAALWCLTSPEKHF-A 301
Query: 372 KELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKG 521
+ + ++ G+GTDEE + + + + + + Y+ Y ++ +D++G
Sbjct: 302 EVIRTSILGLGTDEEMLTRGIVSRAEVDMEKVKEEYKVRYNTTVTADVRG 351
Score = 36.3 bits (80), Expect = 0.015
Identities = 15/64 (23%), Positives = 34/64 (53%)
Frame = +3
Query: 162 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVA 341
+R ++ G GTDE+ + + R V ++ E +K Y + ++++ + +G N ++
Sbjct: 304 IRTSILGLGTDEEMLTRGIVSRAEVDMEKVKEEYKVRYNTTVTADVRGDTSGYYMNTLLT 363
Query: 342 LMTP 353
L+ P
Sbjct: 364 LVGP 367
Score = 35.9 bits (79), Expect = 0.020
Identities = 22/61 (36%), Positives = 32/61 (52%)
Frame = +3
Query: 321 LENVIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKS 500
+ ++ V P P A+ + AV G GTDE A+IEIL + I+ YE LY ++
Sbjct: 47 MASISVPNPAPSPTEDAESIRKAVQGWGTDENALIEILGHRTAAQRAEIAVAYEGLYDET 106
Query: 501 L 503
L
Sbjct: 107 L 107
Score = 28.7 bits (61), Expect = 3.0
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +3
Query: 369 AKELHDAVSGIG--TDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKG 521
A ELHDAV G G + ++ I+ T S + Y Q +GK ++ L G
Sbjct: 224 AAELHDAVVGRGQALHGDDVVRIVGTRSKAQLAVTLERYRQEHGKGIDEVLDG 276
>06_01_0830 +
6261629-6261704,6261829-6261974,6262086-6262310,
6262910-6263122,6264007-6264300
Length = 317
Score = 59.7 bits (138), Expect = 1e-09
Identities = 35/121 (28%), Positives = 60/121 (49%), Gaps = 3/121 (2%)
Frame = +3
Query: 162 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVA 341
LRKA +G+GT+E II +L R QR I + YG++L+ + E++G+ E ++
Sbjct: 20 LRKAFQGWGTNEALIISILAHRDAAQRRAIRRAYADTYGEELLRSITDEISGDFERAVI- 78
Query: 342 LMTPLPHFYAKELHDAVSG---IGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESD 512
L T P L + V+ G+ ++EI C + + Y + + +SLE D
Sbjct: 79 LWTLDPAERDAVLANEVARKWYPGSGSRVLVEIACARGPAQLFAVRQAYHERFKRSLEED 138
Query: 513 L 515
+
Sbjct: 139 V 139
Score = 50.0 bits (114), Expect = 1e-06
Identities = 33/119 (27%), Positives = 56/119 (47%), Gaps = 4/119 (3%)
Frame = +3
Query: 177 KGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYG----KDLISELKSELTGNLENVIVAL 344
K +G DE II +L R Q + + YG KDL ++ K E L +I
Sbjct: 184 KAYGDDE--IIRILTTRSKAQLIATFNRYNDEYGHPINKDLKADPKDEFLSTLRAIIRCF 241
Query: 345 MTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKG 521
P ++ K + A++G+GTDE ++ I+ T + ++ I+ Y++ LE + G
Sbjct: 242 CCP-DRYFEKVIRLAIAGMGTDENSLTRIITTRAEVDLKLITEAYQKRNSVPLERAVAG 299
Score = 47.2 bits (107), Expect = 8e-06
Identities = 29/122 (23%), Positives = 53/122 (43%), Gaps = 11/122 (9%)
Frame = +3
Query: 186 GTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVALM------ 347
G+ + ++++ C RG Q + + + + + L ++ + TG+ ++V L+
Sbjct: 102 GSGSRVLVEIACARGPAQLFAVRQAYHERFKRSLEEDVAAHATGDFRKLLVPLISAYRYE 161
Query: 348 -----TPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESD 512
T L H AK LH+ + ++ II IL T S + Y YG + D
Sbjct: 162 GPEVNTKLAHSEAKILHEKIQHKAYGDDEIIRILTTRSKAQLIATFNRYNDEYGHPINKD 221
Query: 513 LK 518
LK
Sbjct: 222 LK 223
Score = 33.1 bits (72), Expect = 0.14
Identities = 16/62 (25%), Positives = 32/62 (51%)
Frame = +3
Query: 162 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVA 341
+R A+ G GTDE ++ ++ R V I E ++ L + + +G+ E +++A
Sbjct: 252 IRLAIAGMGTDENSLTRIITTRAEVDLKLITEAYQKRNSVPLERAVAGDTSGDYERMLLA 311
Query: 342 LM 347
L+
Sbjct: 312 LL 313
Score = 27.1 bits (57), Expect = 9.1
Identities = 16/43 (37%), Positives = 19/43 (44%)
Frame = +3
Query: 375 ELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSL 503
+L A G GT+E II IL R I Y YG+ L
Sbjct: 19 QLRKAFQGWGTNEALIISILAHRDAAQRRAIRRAYADTYGEEL 61
>08_02_0726 + 20452492-20453238,20453676-20453765,20453904-20454107
Length = 346
Score = 56.4 bits (130), Expect = 1e-08
Identities = 32/111 (28%), Positives = 54/111 (48%)
Frame = +3
Query: 162 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVA 341
L +A KGFG D A+ +L R QR I + Y +DL+ L +EL+G+ + ++
Sbjct: 20 LHRAFKGFGCDATAVTAILAHRDASQRALIRRHYAAVYHQDLLHRLAAELSGHHKRAVLL 79
Query: 342 LMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYG 494
+ A LH A++G TD A E++C+ + + + Y +G
Sbjct: 80 WVLDPASRDAAVLHQALNGDVTDMRAATEVVCSRTPSQLLVVRQAYLARFG 130
Score = 43.2 bits (97), Expect = 1e-04
Identities = 24/73 (32%), Positives = 43/73 (58%), Gaps = 4/73 (5%)
Frame = +3
Query: 297 LKSELTGN----LENVIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRT 464
+KSE +GN L ++ +P +F AK LH+A+ G+GT++ +I ++ T + ++
Sbjct: 251 VKSETSGNFGFGLLTILRCAESPAKYF-AKVLHEAMKGLGTNDTTLIRVVTTRAEVDMQY 309
Query: 465 ISAFYEQLYGKSL 503
I A Y + Y +SL
Sbjct: 310 IKAEYHRSYKRSL 322
Score = 38.7 bits (86), Expect = 0.003
Identities = 19/62 (30%), Positives = 33/62 (53%)
Frame = +3
Query: 162 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVA 341
L +AMKG GT++ +I V+ R V I + +Y + L + SE +GN +++
Sbjct: 281 LHEAMKGLGTNDTTLIRVVTTRAEVDMQYIKAEYHRSYKRSLADAVHSETSGNYRTFLLS 340
Query: 342 LM 347
L+
Sbjct: 341 LI 342
Score = 35.5 bits (78), Expect = 0.026
Identities = 30/133 (22%), Positives = 58/133 (43%), Gaps = 18/133 (13%)
Frame = +3
Query: 162 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKD----LISELKSELTGNLEN 329
L +A+ G TD +A +V+C R Q L + + + +G L ++ +G+ +
Sbjct: 92 LHQALNGDVTDMRAATEVVCSRTPSQLLVVRQAYLARFGGGGGGGLEHDVAVRASGDHQR 151
Query: 330 VIVALMTPLPHFYAKELHDAVSG--------------IGTDEEAIIEILCTLSNYGIRTI 467
+++A + P + E+ D + +GTDE I + S + +
Sbjct: 152 LLLAYLRS-PRYEGPEVVDMAAAARDARELYRAGERRLGTDERTFIRVFSERSAAHMAAV 210
Query: 468 SAFYEQLYGKSLE 506
+A Y +Y +SLE
Sbjct: 211 AAAYHHMYDRSLE 223
>09_03_0079 +
12142390-12142459,12142792-12143006,12143050-12143268,
12143345-12143932
Length = 363
Score = 35.1 bits (77), Expect = 0.034
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Frame = +3
Query: 222 RRGIVQRLEIAET-FKTNYGKD-LISELKSELTGNLENVIVALMTPLPHFYAKEL-HDAV 392
R+ ++Q L +T F D L+S+ S L+G++ + L P ++ DA+
Sbjct: 58 RQDLIQLLSQQKTTFAVIPASDPLVSKHISILSGSIAIRVACLRASEPCVRDADIARDAL 117
Query: 393 SGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDL 515
G D + ++E++CT + + I Y+ Y SLE D+
Sbjct: 118 FGRRIDGDVLVEVVCTRPSGEVALIRQAYQARYSASLERDV 158
>12_01_0471 -
3672309-3672740,3673159-3673251,3673271-3673399,
3673400-3673448,3674291-3674378,3674477-3674573,
3675195-3675278,3675377-3675464,3676589-3676715,
3676774-3676848,3676934-3677042,3677125-3677448,
3677863-3678039
Length = 623
Score = 29.5 bits (63), Expect = 1.7
Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Frame = +3
Query: 288 ISELKSELTGNLENVIVALMTPLPHFY---AKELHDAVSGIGTDEEAIIEILCTLSNYGI 458
IS+L S+ ++++ + PL H + AKE HD + G+G+ + + + L + G
Sbjct: 159 ISDLNSQDKDPIKSIHFSNSNPLCHAFDPEAKEGHDLIIGMGSGDVYSMSLRQQLQDSGR 218
Query: 459 RTISAFYEQLYGKSLESD 512
+ ++A Q Y K + D
Sbjct: 219 KPVAA---QHYNKGVRYD 233
>09_04_0202 -
15544498-15545037,15546043-15546449,15546874-15546977,
15547580-15547788,15548092-15549428,15551680-15551941
Length = 952
Score = 29.1 bits (62), Expect = 2.3
Identities = 17/65 (26%), Positives = 26/65 (40%), Gaps = 2/65 (3%)
Frame = +3
Query: 315 GNLENV-IVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQL- 488
GN V +++ P Y+ L V D + I C + YG R + YE
Sbjct: 116 GNRSQVPVISFTATSPSLYSASLPYFVRATLNDSAQVQSIACLIKTYGWREVVPIYEDTD 175
Query: 489 YGKSL 503
YG+ +
Sbjct: 176 YGRGI 180
>10_01_0167 +
1876793-1877402,1877423-1877642,1877760-1879534,
1880019-1880199,1881313-1881529
Length = 1000
Score = 27.9 bits (59), Expect = 5.2
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +3
Query: 378 LHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFY 479
L D +S T EE ++ LC LS+Y ++++ Y
Sbjct: 703 LSDKLSKCKTKEEMLLASLCKLSSYKLQSLHIIY 736
>03_05_0721 +
27134277-27134666,27135401-27135466,27137036-27137191,
27137286-27137453,27137544-27137711
Length = 315
Score = 27.9 bits (59), Expect = 5.2
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 9/64 (14%)
Frame = -1
Query: 212 VDDSLLIGAEALHSLAKGLGIR-GRVER-----LRGVHRGGALVRV---VLLSAHVEILL 60
VDDSL A+A+H L + LG + GR ++ + +H A+ R+ + L H+ I+
Sbjct: 140 VDDSLAQCAKAVHVLCRALGGKTGRSKKGWDIGVNCIHPTAAMARLFSPIKLPVHMPIIE 199
Query: 59 FNSD 48
F+ D
Sbjct: 200 FHQD 203
>02_05_1224 +
35045268-35045270,35045735-35045863,35046037-35046180,
35046306-35046451,35046583-35046739,35046838-35046896,
35046978-35047137,35047716-35047865,35047969-35048105,
35048186-35048332,35048428-35048540,35048880-35048971,
35049637-35049738,35050108-35050145,35050255-35050381,
35050462-35050632,35050721-35050852,35050929-35051038,
35051118-35051178,35051386-35051427,35051756-35051933,
35052043-35052248,35052843-35052962,35053138-35053182,
35053310-35053408,35053846-35054058,35054254-35054393,
35054469-35054583,35054684-35054722,35054816-35054899,
35054969-35055139,35055891-35056100,35056193-35056378,
35056473-35056601,35056679-35056749,35056834-35056933,
35057016-35057072,35057778-35057834,35057940-35058020,
35058256-35058338,35058448-35058562
Length = 1572
Score = 27.9 bits (59), Expect = 5.2
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +3
Query: 162 LRKAMKGFGTDEKAIIDVLCRRGIVQRLE 248
L+ A + F DEKA+ D LC+R IV R E
Sbjct: 354 LKTAAELFMCDEKALEDSLCKRIIVTRDE 382
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,345,849
Number of Sequences: 37544
Number of extensions: 294474
Number of successful extensions: 1049
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1004
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1046
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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