Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS302C04f
(521 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g12380.1 68418.m01456 annexin, putative similar to annexin [F... 70 1e-12
At2g38760.1 68415.m04759 annexin 3 (ANN3) nearly identical to an... 69 3e-12
At5g10230.1 68418.m01187 annexin 7 (ANN7) nearly identical to ca... 67 8e-12
At5g10220.1 68418.m01185 annexin 6 (ANN6) nearly identical to ca... 64 4e-11
At5g65020.1 68418.m08179 annexin 2 (ANN2) identical to annexin (... 63 1e-10
At1g68090.1 68414.m07778 annexin 5 (ANN5) identical to calcium-b... 62 2e-10
At1g35720.1 68414.m04440 annexin 1 (ANN1) identical to annexin (... 62 2e-10
At5g64840.1 68418.m08157 ABC transporter family protein 28 4.4
At4g19920.1 68417.m02918 disease resistance protein (TIR class),... 28 4.4
At3g04750.1 68416.m00511 pentatricopeptide (PPR) repeat-containi... 28 4.4
At1g34320.1 68414.m04259 expressed protein contains Pfam domain ... 28 4.4
At1g31750.1 68414.m03895 proline-rich family protein contains pr... 28 4.4
At5g09930.1 68418.m01148 ABC transporter family protein 27 5.8
At1g04780.1 68414.m00474 ankyrin repeat family protein contains ... 27 5.8
>At5g12380.1 68418.m01456 annexin, putative similar to annexin
[Fragaria x ananassa] GI:6010777, annexin p33 [Zea mays]
GI:6272285; contains Pfam profile PF00191: Annexin
Length = 316
Score = 69.7 bits (163), Expect = 1e-12
Identities = 42/118 (35%), Positives = 62/118 (52%)
Frame = +3
Query: 162 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVA 341
++ A +G+GT+E AII +L R + QR I + ++ Y +DLI +LKSEL+GN E I
Sbjct: 19 IKAACQGWGTNENAIISILGHRNLFQRKLIRQAYQEIYHEDLIHQLKSELSGNFERAICL 78
Query: 342 LMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDL 515
+ P A + A+ D + ++EI C S + Y LY SLE DL
Sbjct: 79 WVLDPPERDALLANLALQKPIPDYKVLVEIACMRSPEDMLAARRAYRCLYKHSLEEDL 136
Score = 49.2 bits (112), Expect = 2e-06
Identities = 33/119 (27%), Positives = 56/119 (47%), Gaps = 4/119 (3%)
Frame = +3
Query: 162 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYG----KDLISELKSELTGNLEN 329
L + G D + I VL R +Q I +K YG KDL++ +E L
Sbjct: 174 LHDEILGKAVDHEETIRVLSTRSSMQLSAIFNRYKDIYGTSITKDLLNHPTNEYLSALRA 233
Query: 330 VIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLE 506
I + P +YAK L ++++ +GTDE+A+ ++ T + + I+ Y + SL+
Sbjct: 234 AIRCIKNPT-RYYAKVLRNSINTVGTDEDALNRVIVTRAEKDLTNITGLYFKRNNVSLD 291
Score = 48.4 bits (110), Expect = 3e-06
Identities = 31/119 (26%), Positives = 52/119 (43%), Gaps = 11/119 (9%)
Frame = +3
Query: 192 DEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVALMTP------ 353
D K ++++ C R L ++ Y L +L S G++ ++VA+++
Sbjct: 101 DYKVLVEIACMRSPEDMLAARRAYRCLYKHSLEEDLASRTIGDIRRLLVAMVSAYKYDGE 160
Query: 354 -----LPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDL 515
L A LHD + G D E I +L T S+ + I Y+ +YG S+ DL
Sbjct: 161 EIDEMLAQSEAAILHDEILGKAVDHEETIRVLSTRSSMQLSAIFNRYKDIYGTSITKDL 219
Score = 31.5 bits (68), Expect = 0.36
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Frame = +3
Query: 336 VALMTPLPHFY----AKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSL 503
+A + PHF A+ + A G GT+E AII IL + + + I Y+++Y + L
Sbjct: 1 MATIVSPPHFSPVEDAENIKAACQGWGTNENAIISILGHRNLFQRKLIRQAYQEIYHEDL 60
Query: 504 ESDLK 518
LK
Sbjct: 61 IHQLK 65
>At2g38760.1 68415.m04759 annexin 3 (ANN3) nearly identical to
annexin (AnnAt3) [Arabidopsis thaliana] GI:6503082;
contains Pfam profile PF00191: Annexin
Length = 321
Score = 68.5 bits (160), Expect = 3e-12
Identities = 44/124 (35%), Positives = 69/124 (55%), Gaps = 5/124 (4%)
Frame = +3
Query: 159 TLRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIV 338
TL++A++G+GTDEKAII VL +R QR +I E+F+ YGKDLI L SEL+G+ +V
Sbjct: 19 TLKQAIRGWGTDEKAIIRVLGQRDQSQRRKIRESFREIYGKDLIDVLSSELSGDFMKAVV 78
Query: 339 ALMTPLPHFYAKELHDAVSGIGTDE-----EAIIEILCTLSNYGIRTISAFYEQLYGKSL 503
+ A+ ++ ++ + + I+EI CT S + + Y L+ SL
Sbjct: 79 SWTYDPAERDARLVNKILNKEKKKKSLENLKVIVEISCTTSPNHLIAVRKAYCSLFDSSL 138
Query: 504 ESDL 515
E +
Sbjct: 139 EEHI 142
Score = 54.4 bits (125), Expect = 4e-08
Identities = 33/125 (26%), Positives = 62/125 (49%), Gaps = 5/125 (4%)
Frame = +3
Query: 162 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELK-----SELTGNLE 326
LR+A++ D ++ +L R I Q E +K NYG + ++ ++L L+
Sbjct: 180 LREAIEKKQLDHDHVLYILGTRSIYQLRETFVAYKKNYGVTIDKDVDGCPGDADLRSLLK 239
Query: 327 NVIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLE 506
I + TP HF AK + D++ G GTDE+++ + T + + + Y +Y S++
Sbjct: 240 VAIFCIDTPEKHF-AKVVRDSIEGFGTDEDSLTRAIVTRAEIDLMKVRGEYFNMYNTSMD 298
Query: 507 SDLKG 521
+ + G
Sbjct: 299 NAITG 303
Score = 35.9 bits (79), Expect = 0.017
Identities = 19/51 (37%), Positives = 27/51 (52%)
Frame = +3
Query: 351 PLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSL 503
P P ++ L A+ G GTDE+AII +L R I + ++YGK L
Sbjct: 11 PSPAQDSETLKQAIRGWGTDEKAIIRVLGQRDQSQRRKIRESFREIYGKDL 61
Score = 34.3 bits (75), Expect = 0.050
Identities = 12/62 (19%), Positives = 35/62 (56%)
Frame = +3
Query: 162 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVA 341
+R +++GFGTDE ++ + R + +++ + Y + + + +++G+ ++ I+
Sbjct: 256 VRDSIEGFGTDEDSLTRAIVTRAEIDLMKVRGEYFNMYNTSMDNAITGDISGDYKDFIIT 315
Query: 342 LM 347
L+
Sbjct: 316 LL 317
>At5g10230.1 68418.m01187 annexin 7 (ANN7) nearly identical to
calcium-binding protein annexin 7 [Arabidopsis thaliana]
GI:12667522
Length = 316
Score = 66.9 bits (156), Expect = 8e-12
Identities = 38/118 (32%), Positives = 56/118 (47%)
Frame = +3
Query: 162 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVA 341
L KA KG+GT+E+ II +L R QR I + NY KDL+ EL EL+G+ E ++
Sbjct: 20 LYKAFKGWGTNERMIISILAHRNATQRSFIRAVYAANYNKDLLKELDRELSGDFERAVML 79
Query: 342 LMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDL 515
A ++ + ++EI CT S + Y+ Y SLE D+
Sbjct: 80 WTFEPAERDAYLAKESTKMFTKNNWVLVEIACTRSALELFNAKQAYQARYKTSLEEDV 137
Score = 34.3 bits (75), Expect = 0.050
Identities = 22/60 (36%), Positives = 28/60 (46%)
Frame = +3
Query: 336 VALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDL 515
V PLP A++L+ A G GT+E II IL + I A Y Y K L +L
Sbjct: 6 VPATVPLPEEDAEQLYKAFKGWGTNERMIISILAHRNATQRSFIRAVYAANYNKDLLKEL 65
>At5g10220.1 68418.m01185 annexin 6 (ANN6) nearly identical to
calcium-binding protein annexin 6 [Arabidopsis thaliana]
GI:12667518
Length = 318
Score = 64.5 bits (150), Expect = 4e-11
Identities = 38/118 (32%), Positives = 55/118 (46%)
Frame = +3
Query: 162 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVA 341
L KA KG+GT+E II +L R QR I + NY KDL+ EL EL+G+ E V++
Sbjct: 20 LHKAFKGWGTNEGMIISILAHRNATQRSFIRAVYAANYNKDLLKELDGELSGDFERVVML 79
Query: 342 LMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDL 515
A +++ + ++EI CT + Y Y SLE D+
Sbjct: 80 WTLDPTERDAYLANESTKLFTKNIWVLVEIACTRPSLEFFKTKQAYHVRYKTSLEEDV 137
Score = 36.3 bits (80), Expect = 0.012
Identities = 22/57 (38%), Positives = 28/57 (49%)
Frame = +3
Query: 351 PLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKG 521
PLP +++LH A G GT+E II IL + I A Y Y K L +L G
Sbjct: 11 PLPEEDSEQLHKAFKGWGTNEGMIISILAHRNATQRSFIRAVYAANYNKDLLKELDG 67
Score = 32.7 bits (71), Expect = 0.15
Identities = 24/118 (20%), Positives = 49/118 (41%), Gaps = 13/118 (11%)
Frame = +3
Query: 204 IIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVALMT----------- 350
++++ C R ++ + + + Y L ++ +GN+ ++V L++
Sbjct: 106 LVEIACTRPSLEFFKTKQAYHVRYKTSLEEDVAYHTSGNIRKLLVPLVSTFRYDGNADEV 165
Query: 351 --PLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLK 518
L AK LH ++ +E +I IL T S I ++ +G S+ LK
Sbjct: 166 NVKLARSEAKTLHKKITEKAYTDEDLIRILTTRSKAQINATLNHFKDKFGSSINKFLK 223
>At5g65020.1 68418.m08179 annexin 2 (ANN2) identical to annexin
(AnnAt2) [Arabidopsis thaliana] GI:4959108
Length = 317
Score = 63.3 bits (147), Expect = 1e-10
Identities = 34/118 (28%), Positives = 54/118 (45%)
Frame = +3
Query: 162 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVA 341
L KA G+GT+EK II +L R QR I + Y +DL+ L EL+ + E ++
Sbjct: 20 LHKAFSGWGTNEKLIISILAHRNAAQRSLIRSVYAATYNEDLLKALDKELSSDFERAVML 79
Query: 342 LMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDL 515
P A ++ + ++EI CT + + Y+ Y KS+E D+
Sbjct: 80 WTLDPPERDAYLAKESTKMFTKNNWVLVEIACTRPALELIKVKQAYQARYKKSIEEDV 137
Score = 42.3 bits (95), Expect = 2e-04
Identities = 26/129 (20%), Positives = 59/129 (45%), Gaps = 11/129 (8%)
Frame = +3
Query: 165 RKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVAL 344
+++ K F + ++++ C R ++ +++ + ++ Y K + ++ +G+L +++ L
Sbjct: 93 KESTKMFTKNNWVLVEIACTRPALELIKVKQAYQARYKKSIEEDVAQHTSGDLRKLLLPL 152
Query: 345 MTP-----------LPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLY 491
++ L AK LH+ VS ++ I IL T S + Y Y
Sbjct: 153 VSTFRYEGDDVNMMLARSEAKILHEKVSEKSYSDDDFIRILTTRSKAQLGATLNHYNNEY 212
Query: 492 GKSLESDLK 518
G ++ +LK
Sbjct: 213 GNAINKNLK 221
Score = 35.5 bits (78), Expect = 0.022
Identities = 20/51 (39%), Positives = 27/51 (52%)
Frame = +3
Query: 351 PLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSL 503
PLP A++LH A SG GT+E+ II IL + I + Y Y + L
Sbjct: 11 PLPEDDAEQLHKAFSGWGTNEKLIISILAHRNAAQRSLIRSVYAATYNEDL 61
>At1g68090.1 68414.m07778 annexin 5 (ANN5) identical to
calcium-binding protein annexin 5 [Arabidopsis thaliana]
GI:12667520
Length = 316
Score = 62.5 bits (145), Expect = 2e-10
Identities = 32/119 (26%), Positives = 67/119 (56%), Gaps = 4/119 (3%)
Frame = +3
Query: 159 TLRKAM-KGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVI 335
TL+ A+ + +D++ +I + R + + T+++ YGK+L ++ E GN E+V+
Sbjct: 174 TLKSAVARKHKSDDQTLIQIFTDRSRTHLVAVRSTYRSMYGKELGKAIRDETRGNFEHVL 233
Query: 336 VALMTPLPH---FYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSL 503
+ ++ + ++AK L ++ G+GTD+ A+I I+ T + ++ I Y + Y K+L
Sbjct: 234 LTILQCAENSCFYFAKALRKSMKGLGTDDTALIRIVVTRAEVDMQFIITEYRKRYKKTL 292
Score = 50.8 bits (116), Expect = 5e-07
Identities = 33/126 (26%), Positives = 64/126 (50%), Gaps = 12/126 (9%)
Frame = +3
Query: 162 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVA 341
L+++++G TD KAI +++C R Q +I + + +G L +++SE +GN + V++A
Sbjct: 92 LKRSLRGAVTDHKAIAEIICTRSGSQLRQIKQVYSNTFGVKLEEDIESEASGNHKRVLLA 151
Query: 342 LMTPL----PHF-------YAKELHDAVS-GIGTDEEAIIEILCTLSNYGIRTISAFYEQ 485
+ P A+ L AV+ +D++ +I+I S + + + Y
Sbjct: 152 YLNTTRYEGPEIDNASVENDARTLKSAVARKHKSDDQTLIQIFTDRSRTHLVAVRSTYRS 211
Query: 486 LYGKSL 503
+YGK L
Sbjct: 212 MYGKEL 217
Score = 44.4 bits (100), Expect = 5e-05
Identities = 21/64 (32%), Positives = 36/64 (56%)
Frame = +3
Query: 162 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVA 341
LRK+MKG GTD+ A+I ++ R V I ++ Y K L + + S+ T + +++
Sbjct: 251 LRKSMKGLGTDDTALIRIVVTRAEVDMQFIITEYRKRYKKTLYNAVHSDTTSHYRTFLLS 310
Query: 342 LMTP 353
L+ P
Sbjct: 311 LLGP 314
>At1g35720.1 68414.m04440 annexin 1 (ANN1) identical to annexin
(AnnAt1) [Arabidopsis thaliana] GI:4959106
Length = 317
Score = 62.1 bits (144), Expect = 2e-10
Identities = 35/118 (29%), Positives = 57/118 (48%)
Frame = +3
Query: 162 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVA 341
LR A +G+GT+E II +L R QR I + + YG+DL+ L EL+ + E I+
Sbjct: 20 LRTAFEGWGTNEDLIISILAHRSAEQRKVIRQAYHETYGEDLLKTLDKELSNDFERAILL 79
Query: 342 LMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDL 515
A ++A + + ++E+ CT ++ + Y Y KSLE D+
Sbjct: 80 WTLEPGERDALLANEATKRWTSSNQVLMEVACTRTSTQLLHARQAYHARYKKSLEEDV 137
Score = 39.5 bits (88), Expect = 0.001
Identities = 29/128 (22%), Positives = 56/128 (43%), Gaps = 11/128 (8%)
Frame = +3
Query: 168 KAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVALM 347
+A K + + + +++V C R Q L + + Y K L ++ TG+ ++V+L+
Sbjct: 94 EATKRWTSSNQVLMEVACTRTSTQLLHARQAYHARYKKSLEEDVAHHTTGDFRKLLVSLV 153
Query: 348 T-----------PLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYG 494
T L AK +H+ + ++E +I IL T S I Y+ +G
Sbjct: 154 TSYRYEGDEVNMTLAKQEAKLVHEKIKDKHYNDEDVIRILSTRSKAQINATFNRYQDDHG 213
Query: 495 KSLESDLK 518
+ + L+
Sbjct: 214 EEILKSLE 221
Score = 34.3 bits (75), Expect = 0.050
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = +3
Query: 351 PLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSL 503
P P A++L A G GT+E+ II IL S + I Y + YG+ L
Sbjct: 11 PAPSDDAEQLRTAFEGWGTNEDLIISILAHRSAEQRKVIRQAYHETYGEDL 61
>At5g64840.1 68418.m08157 ABC transporter family protein
Length = 692
Score = 27.9 bits (59), Expect = 4.4
Identities = 10/34 (29%), Positives = 22/34 (64%)
Frame = +3
Query: 195 EKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISE 296
++A +D LC + + + ++ TF+ NY + +IS+
Sbjct: 315 DRAFLDQLCTKIVETEMGVSRTFEGNYSQYVISK 348
>At4g19920.1 68417.m02918 disease resistance protein (TIR class),
putative domain signature TIR exists, suggestive of a
disease resistance protein.
Length = 274
Score = 27.9 bits (59), Expect = 4.4
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +1
Query: 103 SAPPRCTPRSLSTRPRMPRPFAR 171
S P TP L TRPR P P+AR
Sbjct: 14 SRPRPLTPPVLLTRPRPPLPYAR 36
>At3g04750.1 68416.m00511 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 661
Score = 27.9 bits (59), Expect = 4.4
Identities = 18/52 (34%), Positives = 29/52 (55%)
Frame = +3
Query: 162 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTG 317
+R +KG A+ID+ C+ GI++R + FKT KD ++ S +TG
Sbjct: 395 IRLQLKGDAFLSSALIDMYCKCGIIERAFM--VFKTATEKD-VALWTSMITG 443
>At1g34320.1 68414.m04259 expressed protein contains Pfam domain
PF05003: protein of unknown function (DUF668)
Length = 657
Score = 27.9 bits (59), Expect = 4.4
Identities = 16/66 (24%), Positives = 29/66 (43%)
Frame = +3
Query: 222 RRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVALMTPLPHFYAKELHDAVSGI 401
+RG+ L I T + K + + K L + ++ + + HF E+H+A G
Sbjct: 305 QRGVGDTLAILRTELKSQKKHVRNLKKKSLWSRILEEVMEKLVDVVHFLHLEIHEAFGGA 364
Query: 402 GTDEEA 419
D+ A
Sbjct: 365 DPDKPA 370
>At1g31750.1 68414.m03895 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 176
Score = 27.9 bits (59), Expect = 4.4
Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 3/43 (6%)
Frame = +2
Query: 107 HPHGVPRGAF-RPGRGCRDPSQGY--EGLRHR*EGYHRRALPP 226
H HG P GA+ P +G P GY +G GY A PP
Sbjct: 20 HGHGYPPGAYPPPPQGAYPPPGGYPPQGYPPPPHGYPPAAYPP 62
>At5g09930.1 68418.m01148 ABC transporter family protein
Length = 678
Score = 27.5 bits (58), Expect = 5.8
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = +3
Query: 195 EKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSEL 311
++A +D LC + + + ++ TF NY + +IS K+EL
Sbjct: 301 DRAFLDQLCTKIVETEMGVSRTFDGNYSQYVIS--KAEL 337
>At1g04780.1 68414.m00474 ankyrin repeat family protein contains
Pfam PF00023: Ankyrin repeat
Length = 664
Score = 27.5 bits (58), Expect = 5.8
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Frame = +2
Query: 143 GRG-CRDPSQG-YEGLRHR*EGYHRRALPPRH 232
G G C+ +G + G R R EG+ R ++PPR+
Sbjct: 387 GNGYCKQEKKGWFSGWRKREEGHRRSSVPPRN 418
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,060,799
Number of Sequences: 28952
Number of extensions: 216036
Number of successful extensions: 720
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 677
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 713
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 957410176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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