Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS302C03f
         (495 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   1.1  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    21   4.6  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    21   4.6  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
 Frame = +1

Query: 85   DLESIINQIFTSAKP-PTQLQPVTQPSVADRAPSTLVPGVSTNEDLSCQTS--DGQEGEC 255
            D + I+ +     KP PT ++P T      + P  ++P     E + CQ       +  C
Sbjct: 2196 DPKCILGRDNDKTKPKPTTMKPTTTIGYEPQEP--VLPA----EVVPCQGRLFVADDTNC 2249

Query: 256  VNYYLCN 276
              YYLCN
Sbjct: 2250 AQYYLCN 2256


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 21.4 bits (43), Expect = 4.6
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +1

Query: 367 CLAPDQRPPTDPI 405
           CLAP  +PP  PI
Sbjct: 29  CLAPIPQPPAYPI 41


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 21.4 bits (43), Expect = 4.6
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +1

Query: 367 CLAPDQRPPTDPI 405
           CLAP  +PP  PI
Sbjct: 29  CLAPIPQPPAYPI 41


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,818
Number of Sequences: 336
Number of extensions: 2342
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11630247
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)