Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS302C03f
(495 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z99281-52|CAB16507.3| 512|Caenorhabditis elegans Hypothetical p... 31 0.46
U23170-2|ABD63218.1| 150|Caenorhabditis elegans Hypothetical pr... 31 0.46
AL132862-14|CAB60548.1| 541|Caenorhabditis elegans Hypothetical... 30 1.1
Z31590-2|CAD27604.1| 538|Caenorhabditis elegans Hypothetical pr... 24 1.8
AL023828-22|CAA19467.2| 272|Caenorhabditis elegans Hypothetical... 29 1.9
Z81470-1|CAB03881.1| 321|Caenorhabditis elegans Hypothetical pr... 28 3.2
AC024817-16|AAF59585.2| 610|Caenorhabditis elegans Hypothetical... 28 4.3
AC024136-6|AAF35965.3| 425|Caenorhabditis elegans Hypothetical ... 28 4.3
Z75525-2|CAA99763.1| 1390|Caenorhabditis elegans Hypothetical pr... 27 5.7
Z82089-5|CAD91717.1| 4541|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z82089-4|CAB54513.2| 4648|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z82089-3|CAB05004.2| 634|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z82089-2|CAB05003.2| 4530|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z81499-7|CAD91628.1| 4541|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z81499-6|CAB54224.2| 4648|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z81499-5|CAB04091.2| 634|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z81499-4|CAB04090.2| 4530|Caenorhabditis elegans Hypothetical pr... 27 7.5
U00047-9|AAY43977.1| 293|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z98877-16|CAH60800.1| 975|Caenorhabditis elegans Hypothetical p... 27 9.9
AY462219-1|AAR26006.1| 358|Caenorhabditis elegans GATA transcri... 27 9.9
AF353302-1|AAK32716.1| 376|Caenorhabditis elegans GATA-like tra... 27 9.9
AF067612-7|AAD36952.2| 376|Caenorhabditis elegans Egg laying de... 27 9.9
AF016688-6|AAB66074.2| 274|Caenorhabditis elegans Hypothetical ... 27 9.9
AF003740-9|AAC48140.1| 852|Caenorhabditis elegans Hypothetical ... 27 9.9
>Z99281-52|CAB16507.3| 512|Caenorhabditis elegans Hypothetical
protein Y57G11C.5 protein.
Length = 512
Score = 31.1 bits (67), Expect = 0.46
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -1
Query: 492 HVARXPEGNAVRVPPAAALVHWQGLRPGRDGI 397
H + G + + PP A+L HW LR G +GI
Sbjct: 297 HGVQPDLGQSQKAPPMASLWHWAHLRVGSEGI 328
>U23170-2|ABD63218.1| 150|Caenorhabditis elegans Hypothetical
protein F58F12.4 protein.
Length = 150
Score = 31.1 bits (67), Expect = 0.46
Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 6/76 (7%)
Frame = +1
Query: 76 DTGDLESIINQIFTSAKPPTQLQPVTQPSVADRAPSTLVPGVSTNEDLSCQTSDGQEGEC 255
++ DL + IN+ S +Q++ TQ + PST +P +DL C + + C
Sbjct: 26 ESSDLANFINET-DSEMTSSQIESSTQIPSSTMNPSTKLPSSMRGKDLHCPSIENAVSSC 84
Query: 256 ------VNYYLCNAAN 285
V Y C AN
Sbjct: 85 PKDSKWVYYTCCGGAN 100
>AL132862-14|CAB60548.1| 541|Caenorhabditis elegans Hypothetical
protein Y73F8A.20 protein.
Length = 541
Score = 29.9 bits (64), Expect = 1.1
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -1
Query: 492 HVARXPEGNAVRVPPAAALVHWQGLRPGRDGI 397
H + G + + PP A+L HW L+ G GI
Sbjct: 322 HGVQPDLGQSQKAPPMASLWHWASLKVGSSGI 353
>Z31590-2|CAD27604.1| 538|Caenorhabditis elegans Hypothetical
protein R01H10.3b protein.
Length = 538
Score = 24.2 bits (50), Expect(2) = 1.8
Identities = 12/50 (24%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Frame = +1
Query: 292 IITDGTNVIDIRVG--SGPCSSYIDVCCLAPDQRPPTDPITPRPETLPMN 435
++ D ++ +R S P SS + P + DP+ P+ +P N
Sbjct: 449 VVDDDMGIVTMREAPPSRPASSRASRTEIPPKEESKVDPMKPKQAHVPQN 498
Score = 23.4 bits (48), Expect(2) = 1.8
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +1
Query: 91 ESIINQIFTSAKPPTQLQPVTQPSVADR 174
ES+ Q + S +PP+ QP +PS + R
Sbjct: 419 ESVPTQSY-SERPPSSQQPSPRPSASPR 445
>AL023828-22|CAA19467.2| 272|Caenorhabditis elegans Hypothetical
protein Y17G7B.19 protein.
Length = 272
Score = 29.1 bits (62), Expect = 1.9
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +1
Query: 271 CNAANNTIITDGTNVIDIRVGSGPCSSYIDVCCLAPDQRP 390
C + ++I + G ++ + GPCS++ID C PD+ P
Sbjct: 101 CYSKKSSICSTGGTPFEVELSDGPCSNHID-C--NPDELP 137
>Z81470-1|CAB03881.1| 321|Caenorhabditis elegans Hypothetical
protein C14A6.1 protein.
Length = 321
Score = 28.3 bits (60), Expect = 3.2
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +1
Query: 31 LLLIGFLAAACAQNMDTGDL-ESIINQIFTSAKPPTQ 138
LLL G L AA AQN +TG + S N+ + P Q
Sbjct: 6 LLLFGLLGAATAQNCNTGGIYNSQFNRCYQYFTAPAQ 42
>AC024817-16|AAF59585.2| 610|Caenorhabditis elegans Hypothetical
protein Y54G2A.13 protein.
Length = 610
Score = 27.9 bits (59), Expect = 4.3
Identities = 15/48 (31%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Frame = +1
Query: 115 TSAKPPTQLQPVTQPSVADRAPSTLVPGVSTNEDLSCQ--TSDGQEGE 252
T+ P T L+P T P D P ST ++ Q T+ Q+ E
Sbjct: 221 TTTTPTTTLKPTTSPQKPDSTEEATSPSQSTTTPVATQNPTTSNQKNE 268
>AC024136-6|AAF35965.3| 425|Caenorhabditis elegans Hypothetical
protein F54A3.1 protein.
Length = 425
Score = 27.9 bits (59), Expect = 4.3
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +2
Query: 329 SAVARVHRTSTSAVWLPTRDRQQIPSRPGRRP 424
SA + V R T A + + R + PSRPG RP
Sbjct: 389 SASSSVPRVPTGAASMTSSSRIRPPSRPGSRP 420
>Z75525-2|CAA99763.1| 1390|Caenorhabditis elegans Hypothetical
protein C03D6.4 protein.
Length = 1390
Score = 27.5 bits (58), Expect = 5.7
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +1
Query: 115 TSAKPPTQLQPVTQPSVADRAPSTLVPGVS 204
T +KP T P +QP +A S +P +S
Sbjct: 500 TESKPSTPAAPSSQPKIASTPKSEAIPKIS 529
>Z82089-5|CAD91717.1| 4541|Caenorhabditis elegans Hypothetical
protein ZK270.2e protein.
Length = 4541
Score = 27.1 bits (57), Expect = 7.5
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 142 QPVTQPSVADRAPSTLVPGVSTNEDLSCQTSDGQEGE 252
Q +PS DRAPS + ++T E+ QT + + E
Sbjct: 355 QMFDKPSTVDRAPSAMSQPIATAENQKLQTLNLTDSE 391
>Z82089-4|CAB54513.2| 4648|Caenorhabditis elegans Hypothetical
protein ZK270.2d protein.
Length = 4648
Score = 27.1 bits (57), Expect = 7.5
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 142 QPVTQPSVADRAPSTLVPGVSTNEDLSCQTSDGQEGE 252
Q +PS DRAPS + ++T E+ QT + + E
Sbjct: 344 QMFDKPSTVDRAPSAMSQPIATAENQKLQTLNLTDSE 380
>Z82089-3|CAB05004.2| 634|Caenorhabditis elegans Hypothetical
protein ZK270.2b protein.
Length = 634
Score = 27.1 bits (57), Expect = 7.5
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 142 QPVTQPSVADRAPSTLVPGVSTNEDLSCQTSDGQEGE 252
Q +PS DRAPS + ++T E+ QT + + E
Sbjct: 344 QMFDKPSTVDRAPSAMSQPIATAENQKLQTLNLTDSE 380
>Z82089-2|CAB05003.2| 4530|Caenorhabditis elegans Hypothetical
protein ZK270.2a protein.
Length = 4530
Score = 27.1 bits (57), Expect = 7.5
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 142 QPVTQPSVADRAPSTLVPGVSTNEDLSCQTSDGQEGE 252
Q +PS DRAPS + ++T E+ QT + + E
Sbjct: 344 QMFDKPSTVDRAPSAMSQPIATAENQKLQTLNLTDSE 380
>Z81499-7|CAD91628.1| 4541|Caenorhabditis elegans Hypothetical
protein ZK270.2e protein.
Length = 4541
Score = 27.1 bits (57), Expect = 7.5
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 142 QPVTQPSVADRAPSTLVPGVSTNEDLSCQTSDGQEGE 252
Q +PS DRAPS + ++T E+ QT + + E
Sbjct: 355 QMFDKPSTVDRAPSAMSQPIATAENQKLQTLNLTDSE 391
>Z81499-6|CAB54224.2| 4648|Caenorhabditis elegans Hypothetical
protein ZK270.2d protein.
Length = 4648
Score = 27.1 bits (57), Expect = 7.5
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 142 QPVTQPSVADRAPSTLVPGVSTNEDLSCQTSDGQEGE 252
Q +PS DRAPS + ++T E+ QT + + E
Sbjct: 344 QMFDKPSTVDRAPSAMSQPIATAENQKLQTLNLTDSE 380
>Z81499-5|CAB04091.2| 634|Caenorhabditis elegans Hypothetical
protein ZK270.2b protein.
Length = 634
Score = 27.1 bits (57), Expect = 7.5
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 142 QPVTQPSVADRAPSTLVPGVSTNEDLSCQTSDGQEGE 252
Q +PS DRAPS + ++T E+ QT + + E
Sbjct: 344 QMFDKPSTVDRAPSAMSQPIATAENQKLQTLNLTDSE 380
>Z81499-4|CAB04090.2| 4530|Caenorhabditis elegans Hypothetical
protein ZK270.2a protein.
Length = 4530
Score = 27.1 bits (57), Expect = 7.5
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 142 QPVTQPSVADRAPSTLVPGVSTNEDLSCQTSDGQEGE 252
Q +PS DRAPS + ++T E+ QT + + E
Sbjct: 344 QMFDKPSTVDRAPSAMSQPIATAENQKLQTLNLTDSE 380
>U00047-9|AAY43977.1| 293|Caenorhabditis elegans Hypothetical
protein ZK418.10 protein.
Length = 293
Score = 27.1 bits (57), Expect = 7.5
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +1
Query: 265 YLCNAANNTIITDGTNVIDIRVGSGPCSSYIDVCCLAPDQRPPT 396
+LC+A + I T+G N++ + ++ I+ CCL Q P+
Sbjct: 209 FLCSAVHPDISTEGKNLL-YKYQQYYSAALINHCCLTNQQNAPS 251
>Z98877-16|CAH60800.1| 975|Caenorhabditis elegans Hypothetical
protein Y69H2.10b protein.
Length = 975
Score = 26.6 bits (56), Expect = 9.9
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -2
Query: 155 CVTGCSCVGGFADVKI*LMIDSRSPVSMFCAH 60
C +GC C+ GF+ L I SM CA+
Sbjct: 547 CWSGCGCLDGFSRSTTGLYIPPMGCSSMLCAN 578
>AY462219-1|AAR26006.1| 358|Caenorhabditis elegans GATA
transcription factor EGL-18A protein.
Length = 358
Score = 26.6 bits (56), Expect = 9.9
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = +3
Query: 363 LLSGSRPETANRSHHAQAGDPANEP 437
+++ +RPE+A + HH P++EP
Sbjct: 5 IMTETRPESAEQQHHEVLQRPSDEP 29
>AF353302-1|AAK32716.1| 376|Caenorhabditis elegans GATA-like
transcription factorELT-5 protein.
Length = 376
Score = 26.6 bits (56), Expect = 9.9
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = +3
Query: 363 LLSGSRPETANRSHHAQAGDPANEP 437
+++ +RPE+A + HH P++EP
Sbjct: 5 IMTETRPESAEQQHHEVLQRPSDEP 29
>AF067612-7|AAD36952.2| 376|Caenorhabditis elegans Egg laying
defective protein 18 protein.
Length = 376
Score = 26.6 bits (56), Expect = 9.9
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = +3
Query: 363 LLSGSRPETANRSHHAQAGDPANEP 437
+++ +RPE+A + HH P++EP
Sbjct: 5 IMTETRPESAEQQHHEVLQRPSDEP 29
>AF016688-6|AAB66074.2| 274|Caenorhabditis elegans Hypothetical
protein F18A12.2 protein.
Length = 274
Score = 26.6 bits (56), Expect = 9.9
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +1
Query: 124 KPPTQLQPVTQPSVADRAPSTLVPGVSTNEDLSCQTSDGQ 243
KP T L+P T P + +AP++ ++TN ++ G+
Sbjct: 228 KPRTTLKPSTAPPESSKAPASTGTTLATNPTITGPPGTGK 267
>AF003740-9|AAC48140.1| 852|Caenorhabditis elegans Hypothetical
protein C41D11.6 protein.
Length = 852
Score = 26.6 bits (56), Expect = 9.9
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -1
Query: 345 TRATADSYIDDVGSVSDYGVIGRVAQVIVDALPFLAVGGLA 223
T A+ + ++D+G S IG V +P + +GGLA
Sbjct: 799 TTASIHTALNDIGFASKANEIGLVMLDEASQIPMIKIGGLA 839
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,045,732
Number of Sequences: 27780
Number of extensions: 227359
Number of successful extensions: 842
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 785
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 838
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 935344784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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