Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS302C02f
(521 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_54038| Best HMM Match : CHCH (HMM E-Value=0.44) 32 0.25
SB_49938| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.76
SB_12076| Best HMM Match : CHCH (HMM E-Value=0.28) 30 1.0
SB_19057| Best HMM Match : ADH_zinc_N (HMM E-Value=5.9e-13) 30 1.3
SB_11394| Best HMM Match : GntR (HMM E-Value=7.9) 29 2.3
SB_30175| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_248| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_57079| Best HMM Match : DUF1140 (HMM E-Value=3.8) 28 5.4
SB_30201| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_26758| Best HMM Match : 7tm_1 (HMM E-Value=3.5e-40) 28 5.4
SB_18707| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_12882| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_7444| Best HMM Match : Transposase_1 (HMM E-Value=9.4) 28 5.4
SB_44752| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_486| Best HMM Match : Toxin_3 (HMM E-Value=4.5) 27 7.1
SB_16920| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_59484| Best HMM Match : CHCH (HMM E-Value=0.18) 27 9.4
SB_22132| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_12492| Best HMM Match : IncA (HMM E-Value=0.15) 27 9.4
SB_7961| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
>SB_54038| Best HMM Match : CHCH (HMM E-Value=0.44)
Length = 75
Score = 32.3 bits (70), Expect = 0.25
Identities = 12/46 (26%), Positives = 23/46 (50%)
Frame = -3
Query: 435 EQKHRVLRCKEQKHRVLRCKEQEPQYTAMLHKELRSERM*EQPEQL 298
+Q H + RC +Q H + RC +Q + + + R +QP ++
Sbjct: 26 QQPHEMSRCTQQPHEMSRCTQQPHEMSRCTQPQHEMSRCTQQPNEM 71
>SB_49938| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 882
Score = 30.7 bits (66), Expect = 0.76
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +2
Query: 335 SSLCSIAVYCGSCSLHRSTLCFCSLHRSTLCFCSIRRPQVK 457
S CSI G CS+H ++ + S+H ++ +CSI P V+
Sbjct: 753 SGYCSIYFASGYCSIHFASSVYFSIHLAS-GYCSILHPVVE 792
>SB_12076| Best HMM Match : CHCH (HMM E-Value=0.28)
Length = 115
Score = 30.3 bits (65), Expect = 1.0
Identities = 13/53 (24%), Positives = 24/53 (45%)
Frame = -3
Query: 435 EQKHRVLRCKEQKHRVLRCKEQEPQYTAMLHKELRSERM*EQPEQLQLRTVLP 277
+Q H + RC + H + RC +Q + + + R +QP ++ T P
Sbjct: 56 QQPHEMSRCTQPPHEMSRCTQQPNEMSRCTQQPNEMSRCTQQPNKMSRCTQQP 108
Score = 29.9 bits (64), Expect = 1.3
Identities = 13/53 (24%), Positives = 23/53 (43%)
Frame = -3
Query: 435 EQKHRVLRCKEQKHRVLRCKEQEPQYTAMLHKELRSERM*EQPEQLQLRTVLP 277
+Q H + RC +Q H + RC + + + R +QP ++ T P
Sbjct: 6 QQPHEMSRCTQQPHEMSRCTQPPHEMSRCTQPPHEMSRCTQQPNEMSRCTQQP 58
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/53 (22%), Positives = 23/53 (43%)
Frame = -3
Query: 435 EQKHRVLRCKEQKHRVLRCKEQEPQYTAMLHKELRSERM*EQPEQLQLRTVLP 277
+Q H + RC + H + RC + + + + R +QP ++ T P
Sbjct: 16 QQPHEMSRCTQPPHEMSRCTQPPHEMSRCTQQPNEMSRCTQQPHEMSRCTQPP 68
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/53 (22%), Positives = 24/53 (45%)
Frame = -3
Query: 435 EQKHRVLRCKEQKHRVLRCKEQEPQYTAMLHKELRSERM*EQPEQLQLRTVLP 277
+Q + + RC +Q H + RC + + + + R +QP ++ T P
Sbjct: 46 QQPNEMSRCTQQPHEMSRCTQPPHEMSRCTQQPNEMSRCTQQPNEMSRCTQQP 98
Score = 27.5 bits (58), Expect = 7.1
Identities = 10/43 (23%), Positives = 22/43 (51%)
Frame = -3
Query: 426 HRVLRCKEQKHRVLRCKEQEPQYTAMLHKELRSERM*EQPEQL 298
H + RC +Q + + RC +Q + + + + R +QP ++
Sbjct: 69 HEMSRCTQQPNEMSRCTQQPNEMSRCTQQPNKMSRCTQQPHEM 111
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/50 (24%), Positives = 22/50 (44%)
Frame = -3
Query: 426 HRVLRCKEQKHRVLRCKEQEPQYTAMLHKELRSERM*EQPEQLQLRTVLP 277
H + RC +Q + + RC +Q + + R +QP ++ T P
Sbjct: 39 HEMSRCTQQPNEMSRCTQQPHEMSRCTQPPHEMSRCTQQPNEMSRCTQQP 88
>SB_19057| Best HMM Match : ADH_zinc_N (HMM E-Value=5.9e-13)
Length = 303
Score = 29.9 bits (64), Expect = 1.3
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +2
Query: 302 CSGCSYIRSLRSSLCSIAVYCGSCSLHRSTLCFCSLHRSTLCF 430
C CSY + R +LC+ +C + H S LC H++ C+
Sbjct: 87 CRTCSYCKKGRYNLCAKMNFCATPPYHGS-LCRRYNHQADFCY 128
>SB_11394| Best HMM Match : GntR (HMM E-Value=7.9)
Length = 451
Score = 29.1 bits (62), Expect = 2.3
Identities = 17/42 (40%), Positives = 19/42 (45%)
Frame = +2
Query: 287 VRSCSCSGCSYIRSLRSSLCSIAVYCGSCSLHRSTLCFCSLH 412
V CSC Y S R + CS V C SC R C C +H
Sbjct: 232 VACCSCRVVCY--SCRVACCSCRVVCYSC---RVACCSCRVH 268
>SB_30175| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 617
Score = 29.1 bits (62), Expect = 2.3
Identities = 18/50 (36%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
Frame = -3
Query: 435 EQKHRVLRCKEQ---KHRVLRCKEQEPQYTAMLHKELRSERM*EQPEQLQ 295
E +HR L KEQ KHR L ++Q+ Q+ + ++L+ ++ E+ +QLQ
Sbjct: 391 EIRHRQL-LKEQEELKHRKLLQEQQKLQHKKLQEEKLKHQKQEEEQQQLQ 439
>SB_248| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2656
Score = 28.3 bits (60), Expect = 4.1
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Frame = +2
Query: 296 CSCSGCSYIRSLRSS---LCSIAVYCGSCSLHRSTLCFCSLHRSTLCFCSI 439
C C+ C + S+ LC+I ++ S SLH LC + LC C+I
Sbjct: 1728 CLCAICVFALSVSLRYLYLCAICIFALSVSLHYLYLC-VFVFLPYLCLCAI 1777
>SB_57079| Best HMM Match : DUF1140 (HMM E-Value=3.8)
Length = 235
Score = 27.9 bits (59), Expect = 5.4
Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = -3
Query: 378 KEQEPQYTAMLHKELRSER-M*EQPEQLQLRTVLPLGLLVWQLERSCMKQGQLPKEQRQQ 202
KE+ + + + KEL ++ M +Q QLQ + + +V Q ++ +Q Q + Q+QQ
Sbjct: 139 KERADKNSELREKELNMKKEMQQQQLQLQQKNTEMMQAMVQQQQQQQQQQPQQQQPQQQQ 198
Query: 201 LDR 193
L +
Sbjct: 199 LQQ 201
>SB_30201| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 177
Score = 27.9 bits (59), Expect = 5.4
Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = -3
Query: 378 KEQEPQYTAMLHKELRSER-M*EQPEQLQLRTVLPLGLLVWQLERSCMKQGQLPKEQRQQ 202
KE+ + + + KEL ++ M +Q QLQ + + +V Q ++ +Q Q + Q+QQ
Sbjct: 31 KERADKNSELREKELNMKKEMQQQQLQLQQKNTEMMQAMVQQQQQQQQQQPQQQQPQQQQ 90
Query: 201 LDR 193
L +
Sbjct: 91 LQQ 93
>SB_26758| Best HMM Match : 7tm_1 (HMM E-Value=3.5e-40)
Length = 1413
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 3/24 (12%)
Frame = -1
Query: 443 DEWSRSIGCC---DVRSRSIGCCD 381
D+ + S GCC DV++ S GCCD
Sbjct: 44 DDVNNSSGCCCDDDVKNSSGGCCD 67
>SB_18707| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 176
Score = 27.9 bits (59), Expect = 5.4
Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = -3
Query: 378 KEQEPQYTAMLHKELRSER-M*EQPEQLQLRTVLPLGLLVWQLERSCMKQGQLPKEQRQQ 202
KE+ + + + KEL ++ M +Q QLQ + + +V Q ++ +Q Q + Q+QQ
Sbjct: 30 KERADKNSELREKELNMKKEMQQQQLQLQQKNTEMMQAMVQQQQQQQQQQPQQQQPQQQQ 89
Query: 201 LDR 193
L +
Sbjct: 90 LQQ 92
>SB_12882| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 320
Score = 27.9 bits (59), Expect = 5.4
Identities = 16/51 (31%), Positives = 23/51 (45%)
Frame = +2
Query: 287 VRSCSCSGCSYIRSLRSSLCSIAVYCGSCSLHRSTLCFCSLHRSTLCFCSI 439
V S SC GC S R + S++ C C H T+ S ++ C C +
Sbjct: 25 VVSLSCRGCVVSLSCRDCVVSVSCLCRIC--HVVTVSNLSHDVTSSCLCHV 73
>SB_7444| Best HMM Match : Transposase_1 (HMM E-Value=9.4)
Length = 167
Score = 27.9 bits (59), Expect = 5.4
Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = -3
Query: 378 KEQEPQYTAMLHKELRSER-M*EQPEQLQLRTVLPLGLLVWQLERSCMKQGQLPKEQRQQ 202
KE+ + + + KEL ++ M +Q QLQ + + +V Q ++ +Q Q + Q+QQ
Sbjct: 71 KERADKNSELREKELNMKKEMQQQQLQLQQKNTEMMQAMVQQQQQQQQQQPQQQQPQQQQ 130
Query: 201 LDR 193
L +
Sbjct: 131 LQQ 133
>SB_44752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 421
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = -3
Query: 432 QKHRVLRCKEQKHRVLRCKEQEPQYTAMLHKELRSERM*EQPEQLQLR 289
+K R+L+ K ++ +LR KE+E + + LR R E L+L+
Sbjct: 23 EKDRILKKKMEEQAILREKEEEARRQLQEEQRLRVSRGGEPDHVLELK 70
>SB_486| Best HMM Match : Toxin_3 (HMM E-Value=4.5)
Length = 334
Score = 27.5 bits (58), Expect = 7.1
Identities = 18/54 (33%), Positives = 21/54 (38%)
Frame = +2
Query: 293 SCSCSGCSYIRSLRSSLCSIAVYCGSCSLHRSTLCFCSLHRSTLCFCSIRRPQV 454
+CSC C R L S G H + C C LHR + CS R V
Sbjct: 277 TCSCR-CVLHRGLMSMCFPSRANVGV--FHIACSCLCVLHRVLMSMCSSSRAHV 327
>SB_16920| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 291
Score = 27.1 bits (57), Expect = 9.4
Identities = 11/18 (61%), Positives = 16/18 (88%)
Frame = -1
Query: 332 VASVCRNNRSSCSYVRCC 279
VAS C++NRS+ +Y+RCC
Sbjct: 134 VASRCQSNRST-NYLRCC 150
>SB_59484| Best HMM Match : CHCH (HMM E-Value=0.18)
Length = 125
Score = 27.1 bits (57), Expect = 9.4
Identities = 10/43 (23%), Positives = 22/43 (51%)
Frame = -3
Query: 426 HRVLRCKEQKHRVLRCKEQEPQYTAMLHKELRSERM*EQPEQL 298
H + RC +Q +++ RC +Q + + + R +QP ++
Sbjct: 79 HEMSRCTQQPNKMSRCTQQPNEMGRCTQQPNKMSRCTQQPHEM 121
>SB_22132| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 150
Score = 27.1 bits (57), Expect = 9.4
Identities = 20/83 (24%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Frame = -3
Query: 435 EQKHRVLRCKEQKHRVLRCKEQEPQYTAMLHKELRSERM*EQPEQLQLRTVLPLGLLVWQ 256
+Q+ ++ + ++Q+ R+ + ++Q+P+ ++ R ++ +QP Q + P L Q
Sbjct: 60 QQQQQLQQQQQQQPRLQQQQQQQPRLKQQQQQQPRLKQQQQQPRLKQQQQQQP-RLKQQQ 118
Query: 255 LERSCMKQGQLP--KEQRQQLDR 193
+ +Q Q P K+Q+QQ R
Sbjct: 119 QQPRLQQQQQQPRLKQQQQQQPR 141
>SB_12492| Best HMM Match : IncA (HMM E-Value=0.15)
Length = 497
Score = 27.1 bits (57), Expect = 9.4
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +2
Query: 338 SLCSIAVYCGSCSLHRSTLCFC 403
S C + +YC SC L S++ C
Sbjct: 391 SFCRLFIYCPSCDLQTSSIKVC 412
>SB_7961| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1957
Score = 27.1 bits (57), Expect = 9.4
Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 6/65 (9%)
Frame = +2
Query: 320 IRSLRSSLCSIAVYCG----SCSLHRSTLCFCSLHRSTLCFCSIR--RPQVKELKNLDHI 481
I LRS + S+ ++ C L CS+H ++C CS++ R Q++ +D
Sbjct: 418 IEKLRSHIISVPMHISLVMTECVTGVVKLFHCSIHCRSICACSLKQAREQIRIALGIDLP 477
Query: 482 *SINI 496
++N+
Sbjct: 478 RALNL 482
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,460,310
Number of Sequences: 59808
Number of extensions: 194512
Number of successful extensions: 597
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 500
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 585
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1172759136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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