Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS302C02f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY735443-1|AAU08018.1|  163|Anopheles gambiae bursicon protein.        25   2.0  
AY735442-1|AAU08017.1|  163|Anopheles gambiae bursicon protein.        25   2.0  
AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering In...    23   4.7  
AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.          23   6.2  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   6.2  

>AY735443-1|AAU08018.1|  163|Anopheles gambiae bursicon protein.
          Length = 163

 Score = 24.6 bits (51), Expect = 2.0
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -3

Query: 273 GLLVWQLERSCM 238
           G  +WQ+ERSCM
Sbjct: 75  GSKIWQMERSCM 86


>AY735442-1|AAU08017.1|  163|Anopheles gambiae bursicon protein.
          Length = 163

 Score = 24.6 bits (51), Expect = 2.0
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -3

Query: 273 GLLVWQLERSCM 238
           G  +WQ+ERSCM
Sbjct: 75  GSKIWQMERSCM 86


>AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering
           Institute proto-oncogeneproduct protein.
          Length = 358

 Score = 23.4 bits (48), Expect = 4.7
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = -1

Query: 290 VRCCRWGY*SGSW 252
           +R C WG+ S +W
Sbjct: 279 IRTCHWGFNSSNW 291


>AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.
          Length = 356

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -3

Query: 285 VLPLGLLVWQLERSCMKQG 229
           V  LGL++W++ R C   G
Sbjct: 255 VYALGLVLWEIARRCNVDG 273


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 17/46 (36%), Positives = 23/46 (50%)
 Frame = -3

Query: 432 QKHRVLRCKEQKHRVLRCKEQEPQYTAMLHKELRSERM*EQPEQLQ 295
           +K R LR  EQ+ R  R KEQ  +      +  R +R  EQ E+ Q
Sbjct: 469 EKERELR--EQREREQREKEQREKEQREKEERERQQREKEQREREQ 512



 Score = 22.6 bits (46), Expect = 8.2
 Identities = 13/45 (28%), Positives = 22/45 (48%)
 Frame = -3

Query: 435 EQKHRVLRCKEQKHRVLRCKEQEPQYTAMLHKELRSERM*EQPEQ 301
           EQ+ R  R KEQ+ +  R KE+  +      +  R +R  E+  +
Sbjct: 476 EQREREQREKEQREKEQREKEERERQQREKEQREREQREKERERE 520


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 375,940
Number of Sequences: 2352
Number of extensions: 5809
Number of successful extensions: 19
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)