Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS302B12f
         (462 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6ZGI7 Cluster: Putative uncharacterized protein OJ1767...    34   1.7  
UniRef50_Q4HL05 Cluster: Putative uncharacterized protein; n=1; ...    33   4.0  
UniRef50_A7EPP1 Cluster: Predicted protein; n=1; Sclerotinia scl...    31   9.2  

>UniRef50_Q6ZGI7 Cluster: Putative uncharacterized protein
           OJ1767_D02.33; n=4; cellular organisms|Rep: Putative
           uncharacterized protein OJ1767_D02.33 - Oryza sativa
           subsp. japonica (Rice)
          Length = 160

 Score = 33.9 bits (74), Expect = 1.7
 Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
 Frame = -1

Query: 216 YIRSWSYDWCGSGMVN--CVG*VGTGVRRYIRSRSYCWGDQCSRSTRVGGS 70
           YI +      GSG ++   VG VG GVR + R R   WG    ++ +VGG+
Sbjct: 22  YIGAERSGTAGSGSISPELVGEVGAGVRAWTRGRRGVWGWGAGKAEKVGGA 72


>UniRef50_Q4HL05 Cluster: Putative uncharacterized protein; n=1;
           Campylobacter lari RM2100|Rep: Putative uncharacterized
           protein - Campylobacter lari RM2100
          Length = 669

 Score = 32.7 bits (71), Expect = 4.0
 Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = -2

Query: 449 NYLMTVQLFMKIRQYKNVYTKNPDNLS-KSLFNVITKFV 336
           NY    +LF KI  +KN   KNP+++S + L N+   F+
Sbjct: 218 NYKTLFKLFDKIENFKNYINKNPNSISQEKLQNIANNFI 256


>UniRef50_A7EPP1 Cluster: Predicted protein; n=1; Sclerotinia
           sclerotiorum 1980|Rep: Predicted protein - Sclerotinia
           sclerotiorum 1980
          Length = 194

 Score = 31.5 bits (68), Expect = 9.2
 Identities = 20/55 (36%), Positives = 27/55 (49%)
 Frame = -3

Query: 274 EQQVRPHMELKPTLEPQGLLHKELEL*LVWQRHG*LRGLSRNWRTALHTQQELLL 110
           E   R  M L P  EP G+LH  +E   +WQR G L   S + R ++    E L+
Sbjct: 112 ESNARTEMRL-PIREPYGILHVSIE---IWQRDGYLGFFSESTRHSISFSFEALV 162


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 306,104,872
Number of Sequences: 1657284
Number of extensions: 4898415
Number of successful extensions: 9940
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9817
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9940
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 24771286585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)