Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS302B09f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF495726-1|AAQ06680.1| 892|Homo sapiens unknown protein. 35 0.20
AL356755-4|CAC16508.2| 269|Homo sapiens GDNF family receptor al... 34 0.35
AJ291675-1|CAC19692.1| 182|Homo sapiens putative GDNF family re... 34 0.35
AJ291673-1|CAC19690.1| 269|Homo sapiens GDNF family receptor al... 34 0.35
AF253318-1|AAG25925.1| 269|Homo sapiens GFR receptor alpha 4 pr... 34 0.35
AB001451-1|BAA25798.1| 540|Homo sapiens Sck protein. 32 1.4
BC040441-1|AAH40441.1| 1095|Homo sapiens PLEKHM2 protein protein. 31 3.2
BC007910-1|AAH07910.2| 342|Homo sapiens SPOCD1 protein protein. 31 3.2
AL354919-8|CAI16891.1| 342|Homo sapiens SPOC domain containing ... 31 3.2
M83221-1|AAA36127.1| 579|Homo sapiens I-Rel protein. 30 4.3
DQ314887-1|ABC40746.1| 579|Homo sapiens v-rel reticuloendotheli... 30 4.3
BC028013-1|AAH28013.1| 579|Homo sapiens v-rel reticuloendotheli... 30 4.3
AL356755-3|CAI23466.1| 299|Homo sapiens GDNF family receptor al... 30 4.3
AJ291674-1|CAC19691.1| 299|Homo sapiens putative GDNF family re... 30 4.3
AF043463-1|AAC82346.1| 579|Homo sapiens I-REL protein. 30 4.3
AB209421-1|BAD92658.1| 446|Homo sapiens amiloride-sensitive cat... 30 5.7
DQ206871-1|ABB22046.1| 686|Homo sapiens long form collapsin res... 29 7.5
BX284931-1|CAI14230.1| 692|Homo sapiens lin-9 homolog (C. elega... 29 7.5
BC098561-1|AAH98561.1| 493|Homo sapiens EGF-containing fibulin-... 29 7.5
BC028104-1|AAH28104.1| 417|Homo sapiens SMYD2 protein protein. 29 7.5
BC014410-1|AAH14410.1| 493|Homo sapiens EGF-containing fibulin-... 29 7.5
AY166859-1|AAN87841.1| 546|Homo sapiens TGS2 protein. 29 7.5
AY004330-1|AAK11491.1| 493|Homo sapiens EGF-containing fibulin-... 29 7.5
AL359742-1|CAI12100.1| 692|Homo sapiens lin-9 homolog (C. elega... 29 7.5
AC096549-1|AAX81993.1| 172|Homo sapiens unknown protein. 29 7.5
AB209212-1|BAD92449.1| 418|Homo sapiens EGF-containing fibulin-... 29 7.5
AY165865-1|AAO18147.1| 2809|Homo sapiens fibrillin-3 short form ... 29 9.9
AY165864-1|AAO18146.1| 2809|Homo sapiens fibrillin-3 short form ... 29 9.9
AY165863-1|AAO18145.1| 2809|Homo sapiens fibrillin-3 short form ... 29 9.9
AK131282-1|BAD18457.1| 872|Homo sapiens protein ( Homo sapiens ... 29 9.9
AK097463-1|BAC05064.1| 209|Homo sapiens protein ( Homo sapiens ... 29 9.9
AB177800-1|BAD16736.1| 2809|Homo sapiens fibrillin 3 protein. 29 9.9
AB177799-1|BAD16735.1| 2809|Homo sapiens fibrillin 3 protein. 29 9.9
AB177798-1|BAD16734.1| 2809|Homo sapiens fibrillin 3 protein. 29 9.9
AB177797-1|BAD16733.1| 2809|Homo sapiens fibrillin 3 protein. 29 9.9
AB053450-1|BAB47408.2| 2816|Homo sapiens fibrillin3 protein. 29 9.9
>AF495726-1|AAQ06680.1| 892|Homo sapiens unknown protein.
Length = 892
Score = 34.7 bits (76), Expect = 0.20
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = -2
Query: 196 APWWRSA*PQK*RHGCRRGPSAASLGT-AEPYARSPQT-GPAYAPPWQHTLRAGG 38
+P WR+ P R G +LGT ++ R PQ GP++ PW H +R G
Sbjct: 56 SPSWRNIRPSTARASWPPGTQVLTLGTPSKQCLRGPQVLGPSWPSPWGHPVRTPG 110
>AL356755-4|CAC16508.2| 269|Homo sapiens GDNF family receptor alpha
4 protein.
Length = 269
Score = 33.9 bits (74), Expect = 0.35
Identities = 23/58 (39%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = +3
Query: 39 PPALSVCCQGGA*AGPVCGERAYGSAVPSDAAEGPRRHP--CLHFCGHALRHQGARPR 206
PPAL+ AGP C ER + VPS A GP P CL R + RPR
Sbjct: 76 PPALTHALLFCPCAGPACAERRRQTFVPSCAFSGPGPAPPSCLEPLNFCERSRVCRPR 133
>AJ291675-1|CAC19692.1| 182|Homo sapiens putative GDNF family
receptor alpha 4, secreted isoform c protein.
Length = 182
Score = 33.9 bits (74), Expect = 0.35
Identities = 23/58 (39%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = +3
Query: 39 PPALSVCCQGGA*AGPVCGERAYGSAVPSDAAEGPRRHP--CLHFCGHALRHQGARPR 206
PPAL+ AGP C ER + VPS A GP P CL R + RPR
Sbjct: 76 PPALTHALLFCPCAGPACAERRRQTFVPSCAFSGPGPAPPSCLEPLNFCERSRVCRPR 133
>AJ291673-1|CAC19690.1| 269|Homo sapiens GDNF family receptor alpha
4, GPI anchored isoform protein.
Length = 269
Score = 33.9 bits (74), Expect = 0.35
Identities = 23/58 (39%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = +3
Query: 39 PPALSVCCQGGA*AGPVCGERAYGSAVPSDAAEGPRRHP--CLHFCGHALRHQGARPR 206
PPAL+ AGP C ER + VPS A GP P CL R + RPR
Sbjct: 76 PPALTHALLFCPCAGPACAERRRQTFVPSCAFSGPGPAPPSCLEPLNFCERSRVCRPR 133
>AF253318-1|AAG25925.1| 269|Homo sapiens GFR receptor alpha 4
protein protein.
Length = 269
Score = 33.9 bits (74), Expect = 0.35
Identities = 23/58 (39%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = +3
Query: 39 PPALSVCCQGGA*AGPVCGERAYGSAVPSDAAEGPRRHP--CLHFCGHALRHQGARPR 206
PPAL+ AGP C ER + VPS A GP P CL R + RPR
Sbjct: 76 PPALTHALLFCPCAGPACAERRRQTFVPSCAFSGPGPAPPSCLEPLNFCERSRVCRPR 133
>AB001451-1|BAA25798.1| 540|Homo sapiens Sck protein.
Length = 540
Score = 31.9 bits (69), Expect = 1.4
Identities = 23/64 (35%), Positives = 27/64 (42%)
Frame = +3
Query: 9 CRSLRTPPHPPPALSVCCQGGA*AGPVCGERAYGSAVPSDAAEGPRRHPCLHFCGHALRH 188
C P P PALS C +G G G A GS + AAE R+ +H H H
Sbjct: 41 CEPRCAAPCPLPALSRC-RGAGSRGSRGGRGAAGSGDAAAAAEWIRKGSFIHKPAHGWLH 99
Query: 189 QGAR 200
AR
Sbjct: 100 PDAR 103
>BC040441-1|AAH40441.1| 1095|Homo sapiens PLEKHM2 protein protein.
Length = 1095
Score = 30.7 bits (66), Expect = 3.2
Identities = 21/56 (37%), Positives = 24/56 (42%)
Frame = -2
Query: 193 PWWRSA*PQK*RHGCRRGPSAASLGTAEPYARSPQTGPAYAPPWQHTLRAGGGCGG 26
P W P + R G RR P A+ T PY R + A P R GGG GG
Sbjct: 13 PRWSEG-PGEARAG-RRAPGPAAGTTEPPYGRRQRLAAAPGPRRGKRRRGGGGGGG 66
>BC007910-1|AAH07910.2| 342|Homo sapiens SPOCD1 protein protein.
Length = 342
Score = 30.7 bits (66), Expect = 3.2
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +2
Query: 62 PGRRIGWAGLRRASVWLCCTERRG*RTAPTPMSSLLWSR 178
P + W L + WLCC+ R+G +T P W R
Sbjct: 280 PAKAKVWRSLTQVCCWLCCSPRKGFQTQQGPAPG--WGR 316
>AL354919-8|CAI16891.1| 342|Homo sapiens SPOC domain containing 1
protein.
Length = 342
Score = 30.7 bits (66), Expect = 3.2
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +2
Query: 62 PGRRIGWAGLRRASVWLCCTERRG*RTAPTPMSSLLWSR 178
P + W L + WLCC+ R+G +T P W R
Sbjct: 280 PAKAKVWRSLTQVCCWLCCSPRKGFQTQQGPAPG--WGR 316
>M83221-1|AAA36127.1| 579|Homo sapiens I-Rel protein.
Length = 579
Score = 30.3 bits (65), Expect = 4.3
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +3
Query: 27 PPHPPPALSVCCQGGA*AGPVCGERAYGSAVPSDAAEGP 143
PP PP A +V C GG AG V GE + D+ + P
Sbjct: 506 PPAPPHASAVVCSGG--AGAVVGETPGPEPLTLDSYQAP 542
>DQ314887-1|ABC40746.1| 579|Homo sapiens v-rel
reticuloendotheliosis viral oncogene homolog B, nuclear
factor of kappa l protein.
Length = 579
Score = 30.3 bits (65), Expect = 4.3
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +3
Query: 27 PPHPPPALSVCCQGGA*AGPVCGERAYGSAVPSDAAEGP 143
PP PP A +V C GG AG V GE + D+ + P
Sbjct: 506 PPAPPHASAVVCSGG--AGAVVGETPGPEPLTLDSYQAP 542
>BC028013-1|AAH28013.1| 579|Homo sapiens v-rel
reticuloendotheliosis viral oncogene homolog B, nuclear
factor of kappa l protein.
Length = 579
Score = 30.3 bits (65), Expect = 4.3
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +3
Query: 27 PPHPPPALSVCCQGGA*AGPVCGERAYGSAVPSDAAEGP 143
PP PP A +V C GG AG V GE + D+ + P
Sbjct: 506 PPAPPHASAVVCSGG--AGAVVGETPGPEPLTLDSYQAP 542
>AL356755-3|CAI23466.1| 299|Homo sapiens GDNF family receptor alpha
4 protein.
Length = 299
Score = 30.3 bits (65), Expect = 4.3
Identities = 21/49 (42%), Positives = 24/49 (48%), Gaps = 5/49 (10%)
Frame = +3
Query: 39 PPALSVCCQGGA*AGPVCGERAYGSAVPSDAAEGPRRHP--C---LHFC 170
PPAL+ AGP C ER + VPS A GP P C L+FC
Sbjct: 76 PPALTHALLFCPCAGPACAERRRQTFVPSCAFSGPGPAPPSCLEPLNFC 124
>AJ291674-1|CAC19691.1| 299|Homo sapiens putative GDNF family
receptor alpha 4, GPI anchored isoform b protein.
Length = 299
Score = 30.3 bits (65), Expect = 4.3
Identities = 21/49 (42%), Positives = 24/49 (48%), Gaps = 5/49 (10%)
Frame = +3
Query: 39 PPALSVCCQGGA*AGPVCGERAYGSAVPSDAAEGPRRHP--C---LHFC 170
PPAL+ AGP C ER + VPS A GP P C L+FC
Sbjct: 76 PPALTHALLFCPCAGPACAERRRQTFVPSCAFSGPGPAPPSCLEPLNFC 124
>AF043463-1|AAC82346.1| 579|Homo sapiens I-REL protein.
Length = 579
Score = 30.3 bits (65), Expect = 4.3
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +3
Query: 27 PPHPPPALSVCCQGGA*AGPVCGERAYGSAVPSDAAEGP 143
PP PP A +V C GG AG V GE + D+ + P
Sbjct: 506 PPAPPHASAVVCSGG--AGAVVGETPGPEPLTLDSYQAP 542
>AB209421-1|BAD92658.1| 446|Homo sapiens amiloride-sensitive cation
channel 3 isoform c variant protein.
Length = 446
Score = 29.9 bits (64), Expect = 5.7
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 4/34 (11%)
Frame = -1
Query: 419 AHPALNRTCLP----EKPSLAVKWSRLRRVKVKS 330
AHPA+ RTC P +PS WSR R ++ +S
Sbjct: 390 AHPAIGRTCWPWTSSLRPSTMRPWSRRRPMRCQS 423
>DQ206871-1|ABB22046.1| 686|Homo sapiens long form collapsin
response mediator protein 1 protein.
Length = 686
Score = 29.5 bits (63), Expect = 7.5
Identities = 22/50 (44%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Frame = -3
Query: 204 AVGLPG-GGARDHKSE--DMGVGAVLQPRRSVQQSHTLARRRPAQPMRLP 64
AVGLPG GG+ D S+ + AV P ++ TL RRPA P LP
Sbjct: 72 AVGLPGPGGSEDTASDVSEPSGSAVSSPGERDERPPTLRIRRPA-PRDLP 120
>BX284931-1|CAI14230.1| 692|Homo sapiens lin-9 homolog (C. elegans)
protein.
Length = 692
Score = 29.5 bits (63), Expect = 7.5
Identities = 19/48 (39%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Frame = -2
Query: 157 HGCRRGPSAAS-LGTAEPYARSPQTGPAYAPPWQHTLRAGGGCGGVRR 17
H GP S GTA P R + PP+ AGGG GG RR
Sbjct: 37 HAPGAGPGRDSGAGTAPPALRRRASPCGLLPPFLPPGSAGGGGGGARR 84
>BC098561-1|AAH98561.1| 493|Homo sapiens EGF-containing
fibulin-like extracellular matrix protein 1 protein.
Length = 493
Score = 29.5 bits (63), Expect = 7.5
Identities = 20/68 (29%), Positives = 27/68 (39%)
Frame = -3
Query: 261 AEGDRPSLVGAAEVLGGDIAVGLPGGGARDHKSEDMGVGAVLQPRRSVQQSHTLARRRPA 82
AEG + G + LPGGG AV P +++ + RR PA
Sbjct: 91 AEGTSGATTGVVAASSMATSGVLPGGGFV------ASAAAVAGPEMQTGRNNFVIRRNPA 144
Query: 81 QPMRLPGN 58
P R+P N
Sbjct: 145 DPQRIPSN 152
>BC028104-1|AAH28104.1| 417|Homo sapiens SMYD2 protein protein.
Length = 417
Score = 29.5 bits (63), Expect = 7.5
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = -3
Query: 273 GVSAAEGDRPSLVGAAEVLGGDIAVGLPGGGARDH 169
G G RP G+A + GG +AV LPG R H
Sbjct: 15 GALLQPGQRPGAAGSAALPGGGLAVLLPGLCLRAH 49
>BC014410-1|AAH14410.1| 493|Homo sapiens EGF-containing
fibulin-like extracellular matrix protein 1 protein.
Length = 493
Score = 29.5 bits (63), Expect = 7.5
Identities = 20/68 (29%), Positives = 27/68 (39%)
Frame = -3
Query: 261 AEGDRPSLVGAAEVLGGDIAVGLPGGGARDHKSEDMGVGAVLQPRRSVQQSHTLARRRPA 82
AEG + G + LPGGG AV P +++ + RR PA
Sbjct: 91 AEGTSGATTGVVAASSMATSGVLPGGGFV------ASAAAVAGPEMQTGRNNFVIRRNPA 144
Query: 81 QPMRLPGN 58
P R+P N
Sbjct: 145 DPQRIPSN 152
>AY166859-1|AAN87841.1| 546|Homo sapiens TGS2 protein.
Length = 546
Score = 29.5 bits (63), Expect = 7.5
Identities = 19/48 (39%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Frame = -2
Query: 157 HGCRRGPSAAS-LGTAEPYARSPQTGPAYAPPWQHTLRAGGGCGGVRR 17
H GP S GTA P R + PP+ AGGG GG RR
Sbjct: 37 HAPGAGPGRDSGAGTAPPALRRRASPCGLLPPFLPPGSAGGGGGGARR 84
>AY004330-1|AAK11491.1| 493|Homo sapiens EGF-containing
fibulin-like extracellular matrix protein 1 protein.
Length = 493
Score = 29.5 bits (63), Expect = 7.5
Identities = 20/68 (29%), Positives = 27/68 (39%)
Frame = -3
Query: 261 AEGDRPSLVGAAEVLGGDIAVGLPGGGARDHKSEDMGVGAVLQPRRSVQQSHTLARRRPA 82
AEG + G + LPGGG AV P +++ + RR PA
Sbjct: 91 AEGTSGATTGVVAASSMATSGVLPGGGFV------ASAAAVAGPEMQTGRNNFVIRRNPA 144
Query: 81 QPMRLPGN 58
P R+P N
Sbjct: 145 DPQRIPSN 152
>AL359742-1|CAI12100.1| 692|Homo sapiens lin-9 homolog (C. elegans)
protein.
Length = 692
Score = 29.5 bits (63), Expect = 7.5
Identities = 19/48 (39%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Frame = -2
Query: 157 HGCRRGPSAAS-LGTAEPYARSPQTGPAYAPPWQHTLRAGGGCGGVRR 17
H GP S GTA P R + PP+ AGGG GG RR
Sbjct: 37 HAPGAGPGRDSGAGTAPPALRRRASPCGLLPPFLPPGSAGGGGGGARR 84
>AC096549-1|AAX81993.1| 172|Homo sapiens unknown protein.
Length = 172
Score = 29.5 bits (63), Expect = 7.5
Identities = 20/68 (29%), Positives = 27/68 (39%)
Frame = -3
Query: 261 AEGDRPSLVGAAEVLGGDIAVGLPGGGARDHKSEDMGVGAVLQPRRSVQQSHTLARRRPA 82
AEG + G + LPGGG AV P +++ + RR PA
Sbjct: 91 AEGTSGATTGVVAASSMATSGVLPGGGFV------ASAAAVAGPEMQTGRNNFVIRRNPA 144
Query: 81 QPMRLPGN 58
P R+P N
Sbjct: 145 DPQRIPSN 152
>AB209212-1|BAD92449.1| 418|Homo sapiens EGF-containing
fibulin-like extracellular matrix protein 1 isoform b
variant protein.
Length = 418
Score = 29.5 bits (63), Expect = 7.5
Identities = 20/68 (29%), Positives = 27/68 (39%)
Frame = -3
Query: 261 AEGDRPSLVGAAEVLGGDIAVGLPGGGARDHKSEDMGVGAVLQPRRSVQQSHTLARRRPA 82
AEG + G + LPGGG AV P +++ + RR PA
Sbjct: 16 AEGTSGATTGVVAASSMATSGVLPGGGFV------ASAAAVAGPEMQTGRNNFVIRRNPA 69
Query: 81 QPMRLPGN 58
P R+P N
Sbjct: 70 DPQRIPSN 77
>AY165865-1|AAO18147.1| 2809|Homo sapiens fibrillin-3 short form
precursor transcript variant 3 protein.
Length = 2809
Score = 29.1 bits (62), Expect = 9.9
Identities = 27/84 (32%), Positives = 31/84 (36%), Gaps = 14/84 (16%)
Frame = +3
Query: 9 CRSLRTPPHPPPALSVCCQGGA*AGPVC------GERAYGSAVPSDA---AEGPRRHPC- 158
CRSL + CC GG GP C G AY P + AEG C
Sbjct: 2309 CRSLSSSSEAVTRAECCCGGGRGWGPRCELCPLPGTSAYRKLCPHGSGYTAEGRDVDECR 2368
Query: 159 --LHFCGH--ALRHQGARPRCHLQ 218
H C H + G+ RCH Q
Sbjct: 2369 MLAHLCAHGECINSLGSF-RCHCQ 2391
>AY165864-1|AAO18146.1| 2809|Homo sapiens fibrillin-3 short form
precursor transcript variant 2 protein.
Length = 2809
Score = 29.1 bits (62), Expect = 9.9
Identities = 27/84 (32%), Positives = 31/84 (36%), Gaps = 14/84 (16%)
Frame = +3
Query: 9 CRSLRTPPHPPPALSVCCQGGA*AGPVC------GERAYGSAVPSDA---AEGPRRHPC- 158
CRSL + CC GG GP C G AY P + AEG C
Sbjct: 2309 CRSLSSSSEAVTRAECCCGGGRGWGPRCELCPLPGTSAYRKLCPHGSGYTAEGRDVDECR 2368
Query: 159 --LHFCGH--ALRHQGARPRCHLQ 218
H C H + G+ RCH Q
Sbjct: 2369 MLAHLCAHGECINSLGSF-RCHCQ 2391
>AY165863-1|AAO18145.1| 2809|Homo sapiens fibrillin-3 short form
precursor transcript variant 1 protein.
Length = 2809
Score = 29.1 bits (62), Expect = 9.9
Identities = 27/84 (32%), Positives = 31/84 (36%), Gaps = 14/84 (16%)
Frame = +3
Query: 9 CRSLRTPPHPPPALSVCCQGGA*AGPVC------GERAYGSAVPSDA---AEGPRRHPC- 158
CRSL + CC GG GP C G AY P + AEG C
Sbjct: 2309 CRSLSSSSEAVTRAECCCGGGRGWGPRCELCPLPGTSAYRKLCPHGSGYTAEGRDVDECR 2368
Query: 159 --LHFCGH--ALRHQGARPRCHLQ 218
H C H + G+ RCH Q
Sbjct: 2369 MLAHLCAHGECINSLGSF-RCHCQ 2391
>AK131282-1|BAD18457.1| 872|Homo sapiens protein ( Homo sapiens
cDNA FLJ16233 fis, clone FEBRA2028256, moderately
similar to FIBRILLIN 2 PRECURSOR. ).
Length = 872
Score = 29.1 bits (62), Expect = 9.9
Identities = 27/84 (32%), Positives = 31/84 (36%), Gaps = 14/84 (16%)
Frame = +3
Query: 9 CRSLRTPPHPPPALSVCCQGGA*AGPVC------GERAYGSAVPSDA---AEGPRRHPC- 158
CRSL + CC GG GP C G AY P + AEG C
Sbjct: 415 CRSLSSSSEAVTRAECCCGGGRGWGPRCELCPLPGTSAYRKLCPHGSGYTAEGRDVDECR 474
Query: 159 --LHFCGH--ALRHQGARPRCHLQ 218
H C H + G+ RCH Q
Sbjct: 475 MLAHLCAHGECINSLGSF-RCHCQ 497
>AK097463-1|BAC05064.1| 209|Homo sapiens protein ( Homo sapiens
cDNA FLJ40144 fis, clone TESTI2013012. ).
Length = 209
Score = 29.1 bits (62), Expect = 9.9
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +3
Query: 111 SAVPSDAAEGPRRHPCLHFCGHALRHQGARPRCH 212
++ P++ GP R PC C L H RP+ H
Sbjct: 92 TSAPTEEGHGPVRRPCGMHCLSHLPHPRGRPQGH 125
>AB177800-1|BAD16736.1| 2809|Homo sapiens fibrillin 3 protein.
Length = 2809
Score = 29.1 bits (62), Expect = 9.9
Identities = 27/84 (32%), Positives = 31/84 (36%), Gaps = 14/84 (16%)
Frame = +3
Query: 9 CRSLRTPPHPPPALSVCCQGGA*AGPVC------GERAYGSAVPSDA---AEGPRRHPC- 158
CRSL + CC GG GP C G AY P + AEG C
Sbjct: 2309 CRSLSSSSEAVTRAECCCGGGRGWGPRCELCPLPGTSAYRKLCPHGSGYTAEGRDVDECR 2368
Query: 159 --LHFCGH--ALRHQGARPRCHLQ 218
H C H + G+ RCH Q
Sbjct: 2369 MLAHLCAHGECINSLGSF-RCHCQ 2391
>AB177799-1|BAD16735.1| 2809|Homo sapiens fibrillin 3 protein.
Length = 2809
Score = 29.1 bits (62), Expect = 9.9
Identities = 27/84 (32%), Positives = 31/84 (36%), Gaps = 14/84 (16%)
Frame = +3
Query: 9 CRSLRTPPHPPPALSVCCQGGA*AGPVC------GERAYGSAVPSDA---AEGPRRHPC- 158
CRSL + CC GG GP C G AY P + AEG C
Sbjct: 2309 CRSLSSSSEAVTRAECCCGGGRGWGPRCELCPLPGTSAYRKLCPHGSGYTAEGRDVDECR 2368
Query: 159 --LHFCGH--ALRHQGARPRCHLQ 218
H C H + G+ RCH Q
Sbjct: 2369 MLAHLCAHGECINSLGSF-RCHCQ 2391
>AB177798-1|BAD16734.1| 2809|Homo sapiens fibrillin 3 protein.
Length = 2809
Score = 29.1 bits (62), Expect = 9.9
Identities = 27/84 (32%), Positives = 31/84 (36%), Gaps = 14/84 (16%)
Frame = +3
Query: 9 CRSLRTPPHPPPALSVCCQGGA*AGPVC------GERAYGSAVPSDA---AEGPRRHPC- 158
CRSL + CC GG GP C G AY P + AEG C
Sbjct: 2309 CRSLSSSSEAVTRAECCCGGGRGWGPRCELCPLPGTSAYRKLCPHGSGYTAEGRDVDECR 2368
Query: 159 --LHFCGH--ALRHQGARPRCHLQ 218
H C H + G+ RCH Q
Sbjct: 2369 MLAHLCAHGECINSLGSF-RCHCQ 2391
>AB177797-1|BAD16733.1| 2809|Homo sapiens fibrillin 3 protein.
Length = 2809
Score = 29.1 bits (62), Expect = 9.9
Identities = 27/84 (32%), Positives = 31/84 (36%), Gaps = 14/84 (16%)
Frame = +3
Query: 9 CRSLRTPPHPPPALSVCCQGGA*AGPVC------GERAYGSAVPSDA---AEGPRRHPC- 158
CRSL + CC GG GP C G AY P + AEG C
Sbjct: 2309 CRSLSSSSEAVTRAECCCGGGRGWGPRCELCPLPGTSAYRKLCPHGSGYTAEGRDVDECR 2368
Query: 159 --LHFCGH--ALRHQGARPRCHLQ 218
H C H + G+ RCH Q
Sbjct: 2369 MLAHLCAHGECINSLGSF-RCHCQ 2391
>AB053450-1|BAB47408.2| 2816|Homo sapiens fibrillin3 protein.
Length = 2816
Score = 29.1 bits (62), Expect = 9.9
Identities = 27/84 (32%), Positives = 31/84 (36%), Gaps = 14/84 (16%)
Frame = +3
Query: 9 CRSLRTPPHPPPALSVCCQGGA*AGPVC------GERAYGSAVPSDA---AEGPRRHPC- 158
CRSL + CC GG GP C G AY P + AEG C
Sbjct: 2316 CRSLSSSSEAVTRAECCCGGGRGWGPRCELCPLPGTSAYRKLCPHGSGYTAEGRDVDECR 2375
Query: 159 --LHFCGH--ALRHQGARPRCHLQ 218
H C H + G+ RCH Q
Sbjct: 2376 MLAHLCAHGECINSLGSF-RCHCQ 2398
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,676,991
Number of Sequences: 237096
Number of extensions: 1831221
Number of successful extensions: 10352
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 9760
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10345
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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