Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS302B08f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    23   1.6  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    22   3.8  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    22   3.8  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    21   8.7  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     21   8.7  

>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = -2

Query: 442 VFIIWSVLIPE 410
           VFI+W +L+PE
Sbjct: 308 VFILWIILVPE 318


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 14/65 (21%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
 Frame = -2

Query: 439 FIIWSVLIPESLNAAIKLRFELGVKLLIGRRECAWLQIISKYPISI-EVKSIIPIRYSII 263
           F++  +L+    N   +LRF+L     +G R   ++Q + +    I  +K  + +   I 
Sbjct: 166 FVVVKMLLVRYRNLTKQLRFKLRFFEKLGNRRLGFVQRLDQIQFDICLLKEGVDLVNDIF 225

Query: 262 KWFVV 248
            W ++
Sbjct: 226 GWQIL 230


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 14/65 (21%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
 Frame = -2

Query: 439 FIIWSVLIPESLNAAIKLRFELGVKLLIGRRECAWLQIISKYPISI-EVKSIIPIRYSII 263
           F++  +L+    N   +LRF+L     +G R   ++Q + +    I  +K  + +   I 
Sbjct: 166 FVVVKMLLVRYRNLTKQLRFKLRFFEKLGNRRLGFVQRLDQIQFDICLLKEGVDLVNDIF 225

Query: 262 KWFVV 248
            W ++
Sbjct: 226 GWQIL 230


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 10/47 (21%), Positives = 19/47 (40%)
 Frame = -3

Query: 267 LSSGLLLRMSSVMVFSQVPYPSSRAMARINSLTGSWVSISQTPSYVT 127
           +  G +   +S + +     P  R    +NS   +WV+    P  +T
Sbjct: 208 IPGGGIAAENSPLYWGGADTPWQREYENVNSTVVNWVNAGADPGKLT 254


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 13/43 (30%), Positives = 15/43 (34%)
 Frame = +2

Query: 320 ADDLEPRTLSPADEELYAKFEAKFDRSIEALWDQNTPDDEYQD 448
           A DL PR  SP D             S  +L D +   D   D
Sbjct: 197 ARDLSPRNGSPTDHSPVLNLSKSGGGSAGSLEDDDNISDPEDD 239


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,040
Number of Sequences: 336
Number of extensions: 2504
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)