Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS302B04f
         (488 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ010194-1|CAA09033.1|  684|Anopheles gambiae prophenoloxidase p...    25   1.8  
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    24   2.4  
AJ010193-1|CAA09032.1|  684|Anopheles gambiae prophenoloxidase p...    24   3.2  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         23   5.6  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         23   5.6  
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    23   5.6  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    22   9.8  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    22   9.8  
AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    22   9.8  

>AJ010194-1|CAA09033.1|  684|Anopheles gambiae prophenoloxidase
           protein.
          Length = 684

 Score = 24.6 bits (51), Expect = 1.8
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 253 DLLGRCRDLVIWRWHMHV 200
           DL    RD + +RWH H+
Sbjct: 391 DLTTTMRDPLFYRWHQHI 408


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 24.2 bits (50), Expect = 2.4
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +3

Query: 84  NHHHHTALLPHPMGLHRGLMVPQPHNMVPHNS 179
           +HHHH + L   M L   + +P  H+   HNS
Sbjct: 434 HHHHHHSALVRGMDLMDDMPLPY-HDHNHHNS 464


>AJ010193-1|CAA09032.1|  684|Anopheles gambiae prophenoloxidase
           protein.
          Length = 684

 Score = 23.8 bits (49), Expect = 3.2
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -2

Query: 235 RDLVIWRWHMHV 200
           RD V +RWH H+
Sbjct: 397 RDPVFYRWHQHI 408


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 5.6
 Identities = 10/28 (35%), Positives = 10/28 (35%)
 Frame = +3

Query: 87  HHHHTALLPHPMGLHRGLMVPQPHNMVP 170
           H HH  L  HP   H     P P    P
Sbjct: 97  HPHHHQLPHHPHHQHHPQQQPSPQTSPP 124


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 5.6
 Identities = 10/28 (35%), Positives = 10/28 (35%)
 Frame = +3

Query: 87  HHHHTALLPHPMGLHRGLMVPQPHNMVP 170
           H HH  L  HP   H     P P    P
Sbjct: 97  HPHHHQLPHHPHHQHHPQQQPSPQTSPP 124


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1099

 Score = 23.0 bits (47), Expect = 5.6
 Identities = 9/34 (26%), Positives = 17/34 (50%)
 Frame = +2

Query: 380  VKNQRNSLKSSSRRQRQPNLRSLKSTSSDTNPEP 481
            ++  RN  +++SRR  +   R L+      +P P
Sbjct: 1040 IRRARNDRRNASRRAARARQRELQRAGRPPSPPP 1073


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 22.2 bits (45), Expect = 9.8
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +1

Query: 151 SPTIWSPTTANS 186
           S  +WSPTTA+S
Sbjct: 903 SCVVWSPTTASS 914


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
            structural protein protein.
          Length = 1645

 Score = 22.2 bits (45), Expect = 9.8
 Identities = 10/36 (27%), Positives = 19/36 (52%)
 Frame = -1

Query: 203  RIHVYALLAVVGDHIVGLGDHKTAMEPHRMWKEGRM 96
            R+  + L+AV+G     L D    ++    W++GR+
Sbjct: 1588 RLDNFCLVAVIGARERCLRDDFRPLQLQNPWRKGRL 1623


>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 22.2 bits (45), Expect = 9.8
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = +3

Query: 111 PHPMGLHRGLMVPQPHNMVPH 173
           PHP  +  G   PQP    PH
Sbjct: 37  PHPQFIGDGESSPQPAMYYPH 57


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 418,920
Number of Sequences: 2352
Number of extensions: 7451
Number of successful extensions: 21
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 43131618
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)