Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS302B03f
(421 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans i... 94 9e-21
SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans... 88 5e-19
SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-tr... 85 3e-18
SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-tr... 83 1e-17
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 77 8e-16
SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans... 77 1e-15
SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-tran... 64 6e-12
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 39 3e-04
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 38 6e-04
SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3 |Schizosacchar... 30 0.17
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 27 1.6
SPAC1F7.03 |pkd2||TRP-like ion channel |Schizosaccharomyces pomb... 26 2.7
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 25 3.6
SPMIT.07 |atp6||F0-ATPase subunit 6|Schizosaccharomyces pombe|ch... 25 3.6
SPAC11D3.14c |||oxoprolinase |Schizosaccharomyces pombe|chr 1|||... 25 4.8
SPCC757.03c |||ThiJ domain protein|Schizosaccharomyces pombe|chr... 25 4.8
SPBC646.02 |cwf11||complexed with Cdc5 protein Cwf11 |Schizosacc... 24 8.4
SPAC4H3.02c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 24 8.4
>SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 201
Score = 93.9 bits (223), Expect = 9e-21
Identities = 42/61 (68%), Positives = 49/61 (80%)
Frame = +3
Query: 3 SMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVV 182
SMANAG D+NGSQFFITTVKTPWLDG HVVFG+VL G D+V+KI T D+P++DV
Sbjct: 122 SMANAGPDSNGSQFFITTVKTPWLDGHHVVFGEVLSGYDIVKKISKAETDNRDKPLEDVK 181
Query: 183 I 185
I
Sbjct: 182 I 182
>SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp3 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 173
Score = 88.2 bits (209), Expect = 5e-19
Identities = 40/61 (65%), Positives = 49/61 (80%)
Frame = +3
Query: 3 SMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVV 182
SMANAGKD+NG QFFITTV +LDG+HVVFG+V+EG D+V++IE T GAN RP +V
Sbjct: 107 SMANAGKDSNGCQFFITTVPCDFLDGKHVVFGEVIEGYDIVKEIESTPVGANSRPKSNVA 166
Query: 183 I 185
I
Sbjct: 167 I 167
>SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 162
Score = 85.4 bits (202), Expect = 3e-18
Identities = 40/63 (63%), Positives = 49/63 (77%)
Frame = +3
Query: 3 SMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVV 182
SMANAG +TNGSQFFITTV TPWLDG+HVVFG+V EGMDVV+K+E G+N + +
Sbjct: 97 SMANAGPNTNGSQFFITTVVTPWLDGKHVVFGEVTEGMDVVKKVES--LGSNSGATRARI 154
Query: 183 ISD 191
+ D
Sbjct: 155 VID 157
>SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-trans
isomerase Wis2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 356
Score = 83.4 bits (197), Expect = 1e-17
Identities = 47/83 (56%), Positives = 56/83 (67%), Gaps = 4/83 (4%)
Frame = +3
Query: 3 SMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVV 182
SMANAG +TNGSQFFITTV TP LDG+HVVFGKV++G V+ IE T ND PV VV
Sbjct: 102 SMANAGPNTNGSQFFITTVPTPHLDGKHVVFGKVIQGKSTVRTIENLET-KNDDPVVPVV 160
Query: 183 ISD----TKTEVVAEPFSVTKES 239
I + TK ++ A VT +S
Sbjct: 161 IEECGTCTKDQIEAPKPDVTGDS 183
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 77.4 bits (182), Expect = 8e-16
Identities = 34/61 (55%), Positives = 43/61 (70%)
Frame = +3
Query: 3 SMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVV 182
SMAN+G +TNGSQFFITT TPWLDG+H +F + G+DVV +IE T DRP++
Sbjct: 542 SMANSGPNTNGSQFFITTDLTPWLDGKHTIFARAYAGLDVVHRIEQGETDKYDRPLEPTK 601
Query: 183 I 185
I
Sbjct: 602 I 602
>SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 76.6 bits (180), Expect = 1e-15
Identities = 31/61 (50%), Positives = 46/61 (75%)
Frame = +3
Query: 3 SMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVV 182
SMANAG +TN SQFFIT TPWLDG+H +FG+V+ G+ V +++ + T ++DRP++ +
Sbjct: 89 SMANAGPNTNSSQFFITLAPTPWLDGKHTIFGRVVSGLSVCKRMGLIRTDSSDRPIEPLK 148
Query: 183 I 185
I
Sbjct: 149 I 149
>SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 516
Score = 64.5 bits (150), Expect = 6e-12
Identities = 31/78 (39%), Positives = 46/78 (58%)
Frame = +3
Query: 3 SMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVV 182
SMAN GK+TNGSQFFI LD +H +FG+V+ G++V+ +E T +ND P +
Sbjct: 363 SMANRGKNTNGSQFFILYGPAKHLDNKHTIFGRVVGGLNVLDALEKVPTNSNDHPKLPIK 422
Query: 183 ISDTKTEVVAEPFSVTKE 236
+ D + +PF K+
Sbjct: 423 LED--IIIFVDPFEEWKK 438
>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
transcription Rct1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 39.1 bits (87), Expect = 3e-04
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Frame = +3
Query: 33 GSQFFIT-TVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVVISDTKTEVV 209
GSQF IT + LD R+ ++G+V EG D + KI + +P +D+ I T ++
Sbjct: 112 GSQFIITLSDNLEGLDERYPIYGQVAEGFDTLLKINDAICDEEGQPYRDIRIK--HTIIL 169
Query: 210 AEPF 221
+PF
Sbjct: 170 DDPF 173
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 37.9 bits (84), Expect = 6e-04
Identities = 28/77 (36%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Frame = +3
Query: 6 MANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVL-EGMDVVQKIEMTVTGANDRPVKDVV 182
MA + N SQFFIT TP +G+ +FG+V+ + + V +I AN RPV
Sbjct: 101 MACTENEGNNSQFFITLGPTPEWNGKQTLFGRVVGDTIYNVVRISELELDANQRPVFPPK 160
Query: 183 ISDTKTEVVAEPFSVTK 233
I TEV+ F+ K
Sbjct: 161 I--ISTEVIDNYFTDIK 175
>SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1131
Score = 29.9 bits (64), Expect = 0.17
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = -1
Query: 226 TLKGSATTSVFVSDITTSLTGRSFAPVTVISIFCTTSIPSKTLPKTT 86
+L TT+V+V+++ T G PVT SIF T + + T +T+
Sbjct: 460 SLHYKTTTTVWVTEVFTRYLGDDSTPVTSSSIFSTATEATDTSVQTS 506
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 26.6 bits (56), Expect = 1.6
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Frame = -1
Query: 214 SATTSVFVSDITTSLTGRSFAPVTVISIFCT--TSIP---SKTLPKTTCLP 77
+++TS+ + +TS T + +P+ S CT TSIP + T P T +P
Sbjct: 256 TSSTSIPIPPTSTSSTDTNSSPLPTTSTSCTTSTSIPPTGNSTTPVTPTVP 306
Score = 25.0 bits (52), Expect = 4.8
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = -1
Query: 214 SATTSVFVSDITTSLTGRSFAPVTVISIFCTTS 116
+++TS+ + +TS T + +P+ S CTTS
Sbjct: 200 TSSTSIPIPPTSTSSTDTNSSPLPTTSTSCTTS 232
>SPAC1F7.03 |pkd2||TRP-like ion channel |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 710
Score = 25.8 bits (54), Expect = 2.7
Identities = 15/65 (23%), Positives = 30/65 (46%)
Frame = +3
Query: 72 LDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVVISDTKTEVVAEPFSVTKESAH*I 251
L G H + G+ L +D + I TV + ++ SDT T++ T ++ +
Sbjct: 109 LSGSHTLTGEALSILDSIPSIAYTVPDLDAVVTINIYESDTNTQLAC--VRTTVQNGRSV 166
Query: 252 YNKCL 266
Y++ +
Sbjct: 167 YHRAV 171
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 25.4 bits (53), Expect = 3.6
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = -1
Query: 232 FVTLKGSATTSVFVSDITTSLTGRSFAPVTVISIFCTTSIPSKT 101
+ T S+ S+F T S T +PV+ S T+ +PS T
Sbjct: 75 YATPTSSSEPSIFSESATPSETNSYSSPVSSYSDPATSQLPSST 118
>SPMIT.07 |atp6||F0-ATPase subunit 6|Schizosaccharomyces pombe|chr
mitochondrial|||Manual
Length = 257
Score = 25.4 bits (53), Expect = 3.6
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 241 LTKFIINVLMINIFMRMHLLDFYVIFIYHY 330
L FII L I + + + LL+F + FI Y
Sbjct: 211 LITFIIGFLPITVLVAISLLEFGIAFIQAY 240
>SPAC11D3.14c |||oxoprolinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1260
Score = 25.0 bits (52), Expect = 4.8
Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +3
Query: 78 GRHVVFGKVLE-GMDVVQKIEMTVTGANDRPVKDVV 182
GR +V V+E G+D+VQ+ + A ++ V+DV+
Sbjct: 929 GRSMVEKLVVEYGLDIVQRSMYGIQAAAEKAVRDVL 964
>SPCC757.03c |||ThiJ domain protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 244
Score = 25.0 bits (52), Expect = 4.8
Identities = 14/46 (30%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +3
Query: 45 FITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGA-NDRPVKDV 179
F+ K+P +GR VV+GK + + ++ M V+ A +R ++D+
Sbjct: 147 FVDDTKSP--EGRSVVYGKKVTAFNSTGELVMGVSSALRERNMQDL 190
>SPBC646.02 |cwf11||complexed with Cdc5 protein Cwf11
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1284
Score = 24.2 bits (50), Expect = 8.4
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 33 GSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTV 146
GSQ +T V P G+HV+ K+LE + + TV
Sbjct: 738 GSQPGLTMVNGPTRCGKHVLVCKLLEVLQDTSPNDRTV 775
>SPAC4H3.02c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 391
Score = 24.2 bits (50), Expect = 8.4
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3
Query: 162 RPVKDVVISDTKTEVVAEPFSVTKESA 242
RP +D + D KTE+ F+ T SA
Sbjct: 329 RPTEDRNVIDVKTEIKIRDFTPTLRSA 355
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,495,198
Number of Sequences: 5004
Number of extensions: 26803
Number of successful extensions: 90
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 83
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 90
length of database: 2,362,478
effective HSP length: 66
effective length of database: 2,032,214
effective search space used: 148351622
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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