Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS302B02f
(521 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9Y5K8 Cluster: Vacuolar ATP synthase subunit D; n=81; ... 184 1e-45
UniRef50_Q9XGM1 Cluster: Vacuolar ATP synthase subunit D; n=9; E... 112 4e-24
UniRef50_O59823 Cluster: Vacuolar ATP synthase subunit D; n=1; S... 101 1e-20
UniRef50_P32610 Cluster: Vacuolar ATP synthase subunit D; n=32; ... 97 3e-19
UniRef50_Q00YL0 Cluster: Vacuolar H+-ATPase V1 sector, subunit D... 93 3e-18
UniRef50_A2DY20 Cluster: V-type ATPase, D subunit family protein... 88 1e-16
UniRef50_Q22F22 Cluster: V-type ATPase, D subunit family protein... 86 4e-16
UniRef50_Q5CS23 Cluster: Vacuolar H-ATpase subunit D; n=7; Apico... 86 5e-16
UniRef50_Q1HPT6 Cluster: Vacuolar ATP synthase subunit D; n=1; B... 83 4e-15
UniRef50_Q4DZ24 Cluster: Vacuolar ATP synthase subunit D, putati... 82 9e-15
UniRef50_Q38BM3 Cluster: Vacuolar ATP synthase subunit D, putati... 79 5e-14
UniRef50_Q4N502 Cluster: Vacuolar ATP synthase subunit D, putati... 71 1e-11
UniRef50_Q8SR82 Cluster: VACUOLAR ATP SYNTHASE SUBUNIT D; n=1; E... 69 9e-11
UniRef50_A1Z8V7 Cluster: CG13167-PA; n=3; Sophophora|Rep: CG1316... 65 1e-09
UniRef50_Q8TUS9 Cluster: V-type ATP synthase subunit D; n=2; Eur... 57 3e-07
UniRef50_Q7QVH2 Cluster: GLP_21_44446_43640; n=1; Giardia lambli... 56 7e-07
UniRef50_Q2Y4Y1 Cluster: V-type ATP synthase, subunit D; n=1; un... 48 1e-04
UniRef50_Q58032 Cluster: V-type ATP synthase subunit D; n=14; Ar... 46 4e-04
UniRef50_Q2FL45 Cluster: V-type ATPase, D subunit; n=1; Methanos... 40 0.035
UniRef50_P43435 Cluster: V-type sodium ATP synthase subunit D (E... 39 0.060
UniRef50_O87880 Cluster: V-type ATP synthase subunit D; n=2; The... 37 0.24
UniRef50_Q60188 Cluster: V-type ATP synthase subunit D; n=10; Eu... 37 0.32
UniRef50_Q184E4 Cluster: V-type sodium ATP synthase subunit D; n... 36 0.56
UniRef50_A7PSP8 Cluster: Chromosome chr6 scaffold_28, whole geno... 36 0.74
UniRef50_Q1QKT6 Cluster: Glycosyl transferase, group 1; n=1; Nit... 35 0.98
UniRef50_Q6MAJ7 Cluster: Putative V-type sodium ATP synthase; n=... 34 2.3
UniRef50_Q5P1U0 Cluster: Putative uncharacterized protein; n=2; ... 34 2.3
UniRef50_A2QR54 Cluster: Contig An08c0130, complete genome; n=2;... 34 2.3
UniRef50_Q9RWG6 Cluster: V-type ATP synthase subunit D; n=2; Dei... 34 2.3
UniRef50_A2YNI2 Cluster: MADS-box transcription factor 18; n=8; ... 34 2.3
UniRef50_Q9A614 Cluster: Methyl-accepting chemotaxis protein Mcp... 33 3.0
UniRef50_A6R5H2 Cluster: Nucleolar protein NOP2; n=16; Fungi/Met... 33 4.0
UniRef50_Q9HNE7 Cluster: V-type ATP synthase subunit D; n=8; cel... 33 4.0
UniRef50_Q2IKP8 Cluster: Putative uncharacterized protein; n=1; ... 33 5.2
UniRef50_A0TDV6 Cluster: Putative uncharacterized protein; n=1; ... 33 5.2
UniRef50_Q23AQ5 Cluster: Cation channel family protein; n=7; Euk... 33 5.2
UniRef50_Q6SA09 Cluster: OATP-I; n=7; Murinae|Rep: OATP-I - Mus ... 32 6.9
UniRef50_Q0AYR3 Cluster: UDP-N-acetylmuramoylalanyl-D-glutamate-... 32 6.9
UniRef50_Q23AQ6 Cluster: Cation channel family protein; n=1; Tet... 32 6.9
UniRef50_Q96FW1-2 Cluster: Isoform 2 of Q96FW1 ; n=1; Homo sapie... 32 9.2
UniRef50_Q96FW1 Cluster: Ubiquitin thioesterase OTUB1; n=37; Eum... 32 9.2
>UniRef50_Q9Y5K8 Cluster: Vacuolar ATP synthase subunit D; n=81;
Eukaryota|Rep: Vacuolar ATP synthase subunit D - Homo
sapiens (Human)
Length = 247
Score = 184 bits (447), Expect = 1e-45
Identities = 88/121 (72%), Positives = 102/121 (84%)
Frame = +1
Query: 55 MSGKDRLAIFPSRGAQMLIKGRLAGAVKGHGLLKKKADALQVRFRMILSKIIETKTLMGE 234
MSGKDR+ IFPSR AQ ++K RL GA G LLKKK+DAL +RFR IL KIIETK LMGE
Sbjct: 1 MSGKDRIEIFPSRMAQTIMKARLKGAQTGRNLLKKKSDALTLRFRQILKKIIETKMLMGE 60
Query: 235 VMKEAAFSLAEAKFTTGDFNQVVLQNVTKAQIKIRSKKDNVAGVTLPIFESYQDGSDTYE 414
VM+EAAFSLAEAKFT GDF+ V+QNV KAQ+KIR+KKDNVAGVTLP+FE Y +G+D+YE
Sbjct: 61 VMREAAFSLAEAKFTAGDFSTTVIQNVNKAQVKIRAKKDNVAGVTLPVFEHYHEGTDSYE 120
Query: 415 L 417
L
Sbjct: 121 L 121
Score = 54.8 bits (126), Expect = 1e-06
Identities = 26/32 (81%), Positives = 30/32 (93%)
Frame = +2
Query: 422 GLARGGQQLAKLKKNFQSAVKLLVELASLQTS 517
GLARGG+QLAKLK+N+ AV+LLVELASLQTS
Sbjct: 123 GLARGGEQLAKLKRNYAKAVELLVELASLQTS 154
>UniRef50_Q9XGM1 Cluster: Vacuolar ATP synthase subunit D; n=9;
Eukaryota|Rep: Vacuolar ATP synthase subunit D -
Arabidopsis thaliana (Mouse-ear cress)
Length = 261
Score = 112 bits (270), Expect = 4e-24
Identities = 55/123 (44%), Positives = 84/123 (68%), Gaps = 2/123 (1%)
Frame = +1
Query: 55 MSGKD-RLAIFPSRGAQMLIKGRLAGAVKGHGLLKKKADALQVRFRMILSKIIETKTLMG 231
M+G++ RL + P+ ++K RL GA +GH LLKKK+DAL V+FR +L KI+ K MG
Sbjct: 1 MAGQNARLNVVPTVTMLGVMKARLVGATRGHALLKKKSDALTVQFRALLKKIVTAKESMG 60
Query: 232 EVMKEAAFSLAEAKFTTGD-FNQVVLQNVTKAQIKIRSKKDNVAGVTLPIFESYQDGSDT 408
++MK ++F+L E K+ GD VVL+NV +A +K+RS+ +N+AGV LP F+ + +G
Sbjct: 61 DMMKTSSFALTEVKYVAGDNVKHVVLENVKEATLKVRSRTENIAGVKLPKFDHFSEGETK 120
Query: 409 YEL 417
+L
Sbjct: 121 NDL 123
Score = 40.3 bits (90), Expect = 0.026
Identities = 19/32 (59%), Positives = 25/32 (78%)
Frame = +2
Query: 422 GLARGGQQLAKLKKNFQSAVKLLVELASLQTS 517
GLARGGQQ+ + + A+++LVELASLQTS
Sbjct: 125 GLARGGQQVRACRVAYVKAIEVLVELASLQTS 156
>UniRef50_O59823 Cluster: Vacuolar ATP synthase subunit D; n=1;
Schizosaccharomyces pombe|Rep: Vacuolar ATP synthase
subunit D - Schizosaccharomyces pombe (Fission yeast)
Length = 285
Score = 101 bits (241), Expect = 1e-20
Identities = 57/138 (41%), Positives = 85/138 (61%), Gaps = 2/138 (1%)
Frame = +1
Query: 55 MSGKDRLAIFPSRGAQMLIKGRLAGAVKGHGLLKKKADALQVRFRMILSKIIETKTLMGE 234
M+ K R +FP+R +K RL GA GH LLK+K++AL+ RFR I+ I + K MG
Sbjct: 1 MASKQRENVFPTRMTLTTMKTRLKGAQTGHSLLKRKSEALKKRFREIVVNIEQAKQKMGR 60
Query: 235 VMKEAAFSLAEAKFTTG-DFNQVVLQNVTKAQIKIRSKKDNVAGVTLPIFESYQDGS-DT 408
VM+ AAFS+AE F G + N + Q+V + ++++RSK++N++GV LP FE D S D
Sbjct: 61 VMQIAAFSMAEVGFAMGNNINFEIQQSVKQPRLRVRSKQENISGVFLPTFEMNLDESIDD 120
Query: 409 YELGWFGPWWAAACKAQE 462
++L G KA++
Sbjct: 121 FQLTGLGKGGQQIQKARQ 138
Score = 36.3 bits (80), Expect = 0.43
Identities = 15/32 (46%), Positives = 25/32 (78%)
Frame = +2
Query: 422 GLARGGQQLAKLKKNFQSAVKLLVELASLQTS 517
GL +GGQQ+ K ++ ++ AV+ LV+LAS Q++
Sbjct: 125 GLGKGGQQIQKARQVYEKAVETLVQLASYQSA 156
>UniRef50_P32610 Cluster: Vacuolar ATP synthase subunit D; n=32;
Eukaryota|Rep: Vacuolar ATP synthase subunit D -
Saccharomyces cerevisiae (Baker's yeast)
Length = 256
Score = 96.7 bits (230), Expect = 3e-19
Identities = 53/115 (46%), Positives = 78/115 (67%), Gaps = 1/115 (0%)
Frame = +1
Query: 55 MSGKDRLAIFPSRGAQMLIKGRLAGAVKGHGLLKKKADALQVRFRMILSKIIETKTLMGE 234
MSG +R +FP+R L+K +L GA +G+ LLK+K++AL RFR I +I + K MG
Sbjct: 1 MSG-NREQVFPTRMTLGLMKTKLKGANQGYSLLKRKSEALTKRFRDITKRIDDAKQKMGR 59
Query: 235 VMKEAAFSLAEAKFTTGD-FNQVVLQNVTKAQIKIRSKKDNVAGVTLPIFESYQD 396
VM+ AAFSLAE + TG+ V ++V+ A+ K+R++++NV+GV L FESY D
Sbjct: 60 VMQTAAFSLAEVSYATGENIGYQVQESVSTARFKVRARQENVSGVYLSQFESYID 114
Score = 40.7 bits (91), Expect = 0.020
Identities = 19/32 (59%), Positives = 25/32 (78%)
Frame = +2
Query: 422 GLARGGQQLAKLKKNFQSAVKLLVELASLQTS 517
GL RGGQQ+ + K+ + AV+ LVELASLQT+
Sbjct: 124 GLGRGGQQVQRAKEIYSRAVETLVELASLQTA 155
>UniRef50_Q00YL0 Cluster: Vacuolar H+-ATPase V1 sector, subunit D;
n=1; Ostreococcus tauri|Rep: Vacuolar H+-ATPase V1
sector, subunit D - Ostreococcus tauri
Length = 262
Score = 93.5 bits (222), Expect = 3e-18
Identities = 45/99 (45%), Positives = 66/99 (66%), Gaps = 1/99 (1%)
Frame = +1
Query: 112 KGRLAGAVKGHGLLKKKADALQVRFRMILSKIIETKTLMGEVMKEAAFSLAEAKFTTGD- 288
+ RL GAV+GH LLKKKADAL +R R +L I+E KT +GE+M+EA FS A+ G+
Sbjct: 43 QARLQGAVRGHALLKKKADALTLRHRAVLKAIVERKTTLGEIMREAHFSWTRARHAGGES 102
Query: 289 FNQVVLQNVTKAQIKIRSKKDNVAGVTLPIFESYQDGSD 405
VL V +A++++R+ ++NVAGV +P F G++
Sbjct: 103 VKHAVLDGVERAKVRVRASEENVAGVKIPKFFLRDTGAE 141
Score = 37.1 bits (82), Expect = 0.24
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = +2
Query: 410 MSWAGLARGGQQLAKLKKNFQSAVKLLVELASLQTS 517
M AGL RGG ++ + + F+ A+ LL ELASLQT+
Sbjct: 145 MELAGLGRGGARVREARGAFEKAMTLLSELASLQTA 180
>UniRef50_A2DY20 Cluster: V-type ATPase, D subunit family protein;
n=1; Trichomonas vaginalis G3|Rep: V-type ATPase, D
subunit family protein - Trichomonas vaginalis G3
Length = 246
Score = 88.2 bits (209), Expect = 1e-16
Identities = 50/142 (35%), Positives = 77/142 (54%)
Frame = +1
Query: 76 AIFPSRGAQMLIKGRLAGAVKGHGLLKKKADALQVRFRMILSKIIETKTLMGEVMKEAAF 255
AI P+R +K +L GA KG+ LLKKK+DAL ++FR +L +I +TK +G V K+A F
Sbjct: 3 AIIPTRMELQNLKEKLKGARKGYDLLKKKSDALTMKFRSLLREIRDTKLSVGNVAKDALF 62
Query: 256 SLAEAKFTTGDFNQVVLQNVTKAQIKIRSKKDNVAGVTLPIFESYQDGSDTYELGWFGPW 435
+ E KF D + V+Q+V + DN+AGV P F G++ +L
Sbjct: 63 AYTEVKFVASDISPTVIQSVGNMPQLLLMTIDNIAGVRTPQFHRTNQGTENTDLLGLARG 122
Query: 436 WAAACKAQEELPERCEAFGRVS 501
KA+EE + ++ R++
Sbjct: 123 GQQIQKAREEFTKFLDSLVRLA 144
Score = 36.7 bits (81), Expect = 0.32
Identities = 17/32 (53%), Positives = 22/32 (68%)
Frame = +2
Query: 422 GLARGGQQLAKLKKNFQSAVKLLVELASLQTS 517
GLARGGQQ+ K ++ F + LV LA LQT+
Sbjct: 118 GLARGGQQIQKAREEFTKFLDSLVRLAELQTA 149
>UniRef50_Q22F22 Cluster: V-type ATPase, D subunit family protein;
n=2; Oligohymenophorea|Rep: V-type ATPase, D subunit
family protein - Tetrahymena thermophila SB210
Length = 252
Score = 86.2 bits (204), Expect = 4e-16
Identities = 47/113 (41%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
Frame = +1
Query: 79 IFPSRGAQMLIKGRLAGAVKGHGLLKKKADALQVRFRMILSKIIETKTLMGEVMKEAAFS 258
I PSR + K + A KGH LLKKK DAL+ +FR I+ ++E K M E M++A
Sbjct: 5 ITPSRMTLAIYKAKTVSAKKGHELLKKKCDALKTKFRAIMIALLENKLKMDEEMQKAFIQ 64
Query: 259 LAEAKFTTGDFNQVVLQNVTKAQIKIRSKKDNVAGVTLP---IFESYQDGSDT 408
LA+A + FN V ++V KA ++I +N+AGV LP I E+ +D DT
Sbjct: 65 LADAYWAADQFNTNVRESVKKALVRIEYSSENIAGVMLPNLNIRENIKDNEDT 117
Score = 37.1 bits (82), Expect = 0.24
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = +2
Query: 410 MSWAGLARGGQQLAKLKKNFQSAVKLLVELASLQTS 517
M GL +GG + K K+ F+ A+ LLV++ASLQTS
Sbjct: 121 MGLLGLDKGGFSIQKAKERFKEALYLLVKVASLQTS 156
>UniRef50_Q5CS23 Cluster: Vacuolar H-ATpase subunit D; n=7;
Apicomplexa|Rep: Vacuolar H-ATpase subunit D -
Cryptosporidium parvum Iowa II
Length = 249
Score = 85.8 bits (203), Expect = 5e-16
Identities = 42/106 (39%), Positives = 68/106 (64%)
Frame = +1
Query: 97 AQMLIKGRLAGAVKGHGLLKKKADALQVRFRMILSKIIETKTLMGEVMKEAAFSLAEAKF 276
A IK + GA +G+ LLK+K+DAL +FR +L +I+ETK +G +KEA+F+LA+A +
Sbjct: 6 ALQAIKLKSKGAKQGYDLLKRKSDALSNKFRGMLKEIVETKRSIGNDIKEASFALAKATW 65
Query: 277 TTGDFNQVVLQNVTKAQIKIRSKKDNVAGVTLPIFESYQDGSDTYE 414
GDF ++++ + + + +N+AGV LPIFE D + + E
Sbjct: 66 AAGDFKDRIIESCKRPTVTMEVGTENIAGVRLPIFEMNVDNNSSTE 111
>UniRef50_Q1HPT6 Cluster: Vacuolar ATP synthase subunit D; n=1;
Bombyx mori|Rep: Vacuolar ATP synthase subunit D -
Bombyx mori (Silk moth)
Length = 285
Score = 83.0 bits (196), Expect = 4e-15
Identities = 43/107 (40%), Positives = 67/107 (62%)
Frame = +1
Query: 109 IKGRLAGAVKGHGLLKKKADALQVRFRMILSKIIETKTLMGEVMKEAAFSLAEAKFTTGD 288
IK R +G+ LLK+KA+ L+++ R + S++I T L+ MKEA SLA KFT G+
Sbjct: 19 IKRRQEHVDRGYELLKRKAEGLRIKGRQVASELIATHGLLSHKMKEAYMSLAAIKFTNGE 78
Query: 289 FNQVVLQNVTKAQIKIRSKKDNVAGVTLPIFESYQDGSDTYELGWFG 429
N +VL+NV +AQI+++ +NV+GVT E+ ++ T L + G
Sbjct: 79 SNALVLENVEQAQIRVQRITENVSGVTTTYLEAVEETGVTNALQYAG 125
Score = 35.9 bits (79), Expect = 0.56
Identities = 15/34 (44%), Positives = 26/34 (76%)
Frame = +2
Query: 410 MSWAGLARGGQQLAKLKKNFQSAVKLLVELASLQ 511
+ +AGL GG + ++ KK+F+ AV L+++LASL+
Sbjct: 121 LQYAGLGAGGHRTSEAKKSFREAVHLVLKLASLR 154
>UniRef50_Q4DZ24 Cluster: Vacuolar ATP synthase subunit D, putative;
n=3; Trypanosomatidae|Rep: Vacuolar ATP synthase subunit
D, putative - Trypanosoma cruzi
Length = 265
Score = 81.8 bits (193), Expect = 9e-15
Identities = 42/112 (37%), Positives = 66/112 (58%)
Frame = +1
Query: 67 DRLAIFPSRGAQMLIKGRLAGAVKGHGLLKKKADALQVRFRMILSKIIETKTLMGEVMKE 246
+R PSR + + K RL GA KGH LLKKKADAL +R+R I+ + K M E ++
Sbjct: 4 NRYPALPSRMSLISFKTRLKGAQKGHSLLKKKADALAIRYRAIMGDLRNAKMEMVEQIRG 63
Query: 247 AAFSLAEAKFTTGDFNQVVLQNVTKAQIKIRSKKDNVAGVTLPIFESYQDGS 402
A F++++A+F GD V +++ +R + +N+AGV +P F ++ S
Sbjct: 64 AYFTVSKAQFIAGDIGLAVQESLKLPTYAMRLRVENIAGVRVPSFHEREEHS 115
Score = 38.7 bits (86), Expect = 0.080
Identities = 16/33 (48%), Positives = 25/33 (75%)
Frame = +2
Query: 419 AGLARGGQQLAKLKKNFQSAVKLLVELASLQTS 517
AG+ RGG+QL + + F+ ++LLV++ASLQ S
Sbjct: 131 AGIGRGGEQLREASEKFRETLRLLVKIASLQVS 163
>UniRef50_Q38BM3 Cluster: Vacuolar ATP synthase subunit D, putative;
n=3; Trypanosomatidae|Rep: Vacuolar ATP synthase subunit
D, putative - Trypanosoma brucei
Length = 283
Score = 79.4 bits (187), Expect = 5e-14
Identities = 39/105 (37%), Positives = 62/105 (59%)
Frame = +1
Query: 67 DRLAIFPSRGAQMLIKGRLAGAVKGHGLLKKKADALQVRFRMILSKIIETKTLMGEVMKE 246
+R PSR + + K RL GA KGH LLKKKADAL R+R ++ ++ K + + +K
Sbjct: 4 NRYTALPSRMSLIAFKTRLKGAQKGHSLLKKKADALAFRYRTVMDELRRAKLEVADQIKG 63
Query: 247 AAFSLAEAKFTTGDFNQVVLQNVTKAQIKIRSKKDNVAGVTLPIF 381
+ F++ +A+F GD + V +++ + + DNVAGV +P F
Sbjct: 64 SYFTITQAQFIAGDISLAVQESLKLPTYTLTLRVDNVAGVRVPAF 108
Score = 37.9 bits (84), Expect = 0.14
Identities = 17/35 (48%), Positives = 25/35 (71%)
Frame = +2
Query: 413 SWAGLARGGQQLAKLKKNFQSAVKLLVELASLQTS 517
S AG+ RGG+QL + + F+ +KL V++ASLQ S
Sbjct: 152 SAAGIGRGGEQLREARDAFRETLKLFVKIASLQVS 186
>UniRef50_Q4N502 Cluster: Vacuolar ATP synthase subunit D, putative;
n=3; Piroplasmida|Rep: Vacuolar ATP synthase subunit D,
putative - Theileria parva
Length = 238
Score = 71.3 bits (167), Expect = 1e-11
Identities = 37/108 (34%), Positives = 64/108 (59%), Gaps = 2/108 (1%)
Frame = +1
Query: 79 IFPSRGAQML--IKGRLAGAVKGHGLLKKKADALQVRFRMILSKIIETKTLMGEVMKEAA 252
+ PSR L +K R A G+ LLK+K+DAL +F +L ++ K + E +K+A
Sbjct: 8 LIPSRMLVNLQNLKQRRHNAHLGYSLLKRKSDALTSKFHRLLRATVQGKERLVEGLKDAT 67
Query: 253 FSLAEAKFTTGDFNQVVLQNVTKAQIKIRSKKDNVAGVTLPIFESYQD 396
+SLA A ++ DF +V+++V + + ++ + +N+AGV LP+F D
Sbjct: 68 YSLANAVWSAEDFKSLVIESVGRPSVTLKLRGENIAGVLLPVFSLQTD 115
>UniRef50_Q8SR82 Cluster: VACUOLAR ATP SYNTHASE SUBUNIT D; n=1;
Encephalitozoon cuniculi|Rep: VACUOLAR ATP SYNTHASE
SUBUNIT D - Encephalitozoon cuniculi
Length = 212
Score = 68.5 bits (160), Expect = 9e-11
Identities = 36/109 (33%), Positives = 66/109 (60%)
Frame = +1
Query: 55 MSGKDRLAIFPSRGAQMLIKGRLAGAVKGHGLLKKKADALQVRFRMILSKIIETKTLMGE 234
M+G +R+ +FP+R ++ + A KGH LLK+K+DAL+VR+R + + + + +
Sbjct: 1 MTG-ERIPVFPTRMNLRTMETKQKSAQKGHSLLKRKSDALKVRYRAVEDEYKRKELGINQ 59
Query: 235 VMKEAAFSLAEAKFTTGDFNQVVLQNVTKAQIKIRSKKDNVAGVTLPIF 381
+++A F L EA+F + ++ L K + +RS+ + V+GV+LP F
Sbjct: 60 KIRDAFFRLTEAEFLGANL-KMFLYECQKQNVYVRSRVEQVSGVSLPFF 107
>UniRef50_A1Z8V7 Cluster: CG13167-PA; n=3; Sophophora|Rep:
CG13167-PA - Drosophila melanogaster (Fruit fly)
Length = 373
Score = 64.9 bits (151), Expect = 1e-09
Identities = 40/122 (32%), Positives = 64/122 (52%), Gaps = 1/122 (0%)
Frame = +1
Query: 55 MSGKDRLAIFPSRGAQMLIKGRLAGAVKGHGLLKKKADALQVRFRMILSKIIETKTLMG- 231
M+ +D L IFPSR +++K R+ A +G GLLK+K DA+ ++ R L +I + + G
Sbjct: 1 MAKRDILPIFPSRANSVIMKQRVLAARRGVGLLKRKRDAIDMKLRE-LRRIRFDQDMHGD 59
Query: 232 EVMKEAAFSLAEAKFTTGDFNQVVLQNVTKAQIKIRSKKDNVAGVTLPIFESYQDGSDTY 411
E M+ A FS+A+A DF ++ A + +R + + GV L E G +
Sbjct: 60 EAMRNAIFSMAKANLLGADFKPQMVSRSHVATVSLRRTEIKIVGVKLNTLELETKGVGAF 119
Query: 412 EL 417
L
Sbjct: 120 PL 121
Score = 34.3 bits (75), Expect = 1.7
Identities = 14/31 (45%), Positives = 24/31 (77%)
Frame = +2
Query: 419 AGLARGGQQLAKLKKNFQSAVKLLVELASLQ 511
AGL+ GG Q+++++ ++ A+K LVE ASL+
Sbjct: 122 AGLSCGGMQVSRIRDSYTKALKALVEFASLE 152
>UniRef50_Q8TUS9 Cluster: V-type ATP synthase subunit D; n=2;
Euryarchaeota|Rep: V-type ATP synthase subunit D -
Methanopyrus kandleri
Length = 232
Score = 56.8 bits (131), Expect = 3e-07
Identities = 37/114 (32%), Positives = 56/114 (49%), Gaps = 1/114 (0%)
Frame = +1
Query: 85 PSRGAQMLIKGRLAGAVKGHGLLKKKADALQVRFRMILSKIIETKTLMGEVMKEAAFSLA 264
P+R + ++ R+ A KGH LLK+K DAL + F ++ + E + + + EA LA
Sbjct: 11 PTRMELLKLQDRIELAKKGHKLLKEKRDALIMEFFEMVKRASEIREQAVKKLMEAYSKLA 70
Query: 265 EAKFTTGDFNQVVLQNVTKAQIKIRSKKDNVAGVTLPIFESY-QDGSDTYELGW 423
AK T G+ T +IK+ NV GV +PI E +DG G+
Sbjct: 71 AAKVTVGEIGVERASMATGEEIKVDVGSRNVMGVVVPIIERVSEDGGSKVVYGF 124
>UniRef50_Q7QVH2 Cluster: GLP_21_44446_43640; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_21_44446_43640 - Giardia lamblia
ATCC 50803
Length = 268
Score = 55.6 bits (128), Expect = 7e-07
Identities = 35/108 (32%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Frame = +1
Query: 70 RLAIFPSRGAQMLIKGRLAGAVKGHGLLKKKADALQVRFRMILSKIIETKTLMGEVMKEA 249
RL + P++ M ++ R A + +GH LLKKK DA+ ++ R + S+++ + M +KEA
Sbjct: 5 RLNVLPTKMQLMALRQRYAASQRGHSLLKKKLDAMTLQLRSLNSQLVTAREAMVSALKEA 64
Query: 250 AFS--LAEAKFTTGDFNQVVLQNVTKAQIKIRSKK--DNVAGVTLPIF 381
+S LA+ T+G L + +A + K NVAGV + F
Sbjct: 65 NWSLTLAQRSVTSGSDLYSTLFSACEAAPNLTVHKIIQNVAGVRVSSF 112
>UniRef50_Q2Y4Y1 Cluster: V-type ATP synthase, subunit D; n=1;
uncultured archaeon|Rep: V-type ATP synthase, subunit D
- uncultured archaeon
Length = 218
Score = 48.0 bits (109), Expect = 1e-04
Identities = 31/106 (29%), Positives = 54/106 (50%)
Frame = +1
Query: 79 IFPSRGAQMLIKGRLAGAVKGHGLLKKKADALQVRFRMILSKIIETKTLMGEVMKEAAFS 258
+ P+R + ++ R AVKGH LL++K DAL F ++ ++ + + + E +KEA
Sbjct: 11 VSPTRMELLRLRRREQLAVKGHDLLREKRDALIAEFLDVVGEVRDARMVAEEDLKEAFEY 70
Query: 259 LAEAKFTTGDFNQVVLQNVTKAQIKIRSKKDNVAGVTLPIFESYQD 396
L A+ G L +T +I + ++ GV +PI E +D
Sbjct: 71 LIIAQAGLGVEEVRQLSLMTAREIPVDFSMRSIMGVNVPIIELPED 116
>UniRef50_Q58032 Cluster: V-type ATP synthase subunit D; n=14;
Archaea|Rep: V-type ATP synthase subunit D -
Methanococcus jannaschii
Length = 216
Score = 46.4 bits (105), Expect = 4e-04
Identities = 32/114 (28%), Positives = 53/114 (46%), Gaps = 1/114 (0%)
Frame = +1
Query: 85 PSRGAQMLIKGRLAGAVKGHGLLKKKADALQVRFRMILSKIIETKTLMGEVMKEAAFSLA 264
P+R + +K ++ A KGH LLK+K DAL + F I+ + + + + + EA L
Sbjct: 6 PTRMELLKLKNKIKLAEKGHKLLKQKRDALIMEFFQIIEQASDLRDKVEAKLAEAYKDLI 65
Query: 265 EAKFTTGDFNQVVLQNVTK-AQIKIRSKKDNVAGVTLPIFESYQDGSDTYELGW 423
A+ G K ++++ N+ GVT+P FE Y E G+
Sbjct: 66 MAQTVMGTLAVKEAALAAKNDKLEVDMDTKNIMGVTVPTFEIYNVRRKVGERGY 119
>UniRef50_Q2FL45 Cluster: V-type ATPase, D subunit; n=1;
Methanospirillum hungatei JF-1|Rep: V-type ATPase, D
subunit - Methanospirillum hungatei (strain JF-1 / DSM
864)
Length = 222
Score = 39.9 bits (89), Expect = 0.035
Identities = 27/115 (23%), Positives = 51/115 (44%)
Frame = +1
Query: 79 IFPSRGAQMLIKGRLAGAVKGHGLLKKKADALQVRFRMILSKIIETKTLMGEVMKEAAFS 258
+ P+R M + ++ A +G LLK+K +AL F I+ E++ + ++ EA +
Sbjct: 4 VHPTRMELMKKRSQIVLAEQGRDLLKEKMEALIQEFFKIMVNFSESREGLEQLAIEADLA 63
Query: 259 LAEAKFTTGDFNQVVLQNVTKAQIKIRSKKDNVAGVTLPIFESYQDGSDTYELGW 423
L A+ TK QI + N+ GV +P+ + + + G+
Sbjct: 64 LLVAEAVDDPIAVKSASYATKRQIMVDISGKNIMGVPVPVIQKKSVALNVMQRGY 118
>UniRef50_P43435 Cluster: V-type sodium ATP synthase subunit D (EC
3.6.3.15) (Na(+)- translocating ATPase subunit D); n=32;
Firmicutes|Rep: V-type sodium ATP synthase subunit D (EC
3.6.3.15) (Na(+)- translocating ATPase subunit D) -
Enterococcus hirae
Length = 230
Score = 39.1 bits (87), Expect = 0.060
Identities = 28/109 (25%), Positives = 48/109 (44%)
Frame = +1
Query: 70 RLAIFPSRGAQMLIKGRLAGAVKGHGLLKKKADALQVRFRMILSKIIETKTLMGEVMKEA 249
RL + P+R +K +L A +GH LLK K D L +F +++ K E + + + + A
Sbjct: 2 RLNVNPTRMELTRLKKQLTTATRGHKLLKDKQDELMRQFILLIRKNNELRQAIEKETQTA 61
Query: 250 AFSLAEAKFTTGDFNQVVLQNVTKAQIKIRSKKDNVAGVTLPIFESYQD 396
AK T + L + + I + N+ V +P+ D
Sbjct: 62 MKDFVLAKSTVEEAFIDELLALPAENVSISVVEKNIMSVKVPLMNFQYD 110
>UniRef50_O87880 Cluster: V-type ATP synthase subunit D; n=2;
Thermus thermophilus|Rep: V-type ATP synthase subunit D
- Thermus thermophilus (strain HB8 / ATCC 27634 / DSM
579)
Length = 223
Score = 37.1 bits (82), Expect = 0.24
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Frame = +1
Query: 79 IFPSRGAQMLIKGRLAGAVKGHGLLKKKADALQVRFRMILSKIIETKTLMGEVMKE--AA 252
+ P+R + +G+L A KG LLKKK DAL F ++ + +E + + + KE AA
Sbjct: 4 VSPTRMNLLQRRGQLRLAQKGVDLLKKKRDALVAEFFGLVREAMEARKALDQAAKEAYAA 63
Query: 253 FSLAEA 270
LA+A
Sbjct: 64 LLLAQA 69
>UniRef50_Q60188 Cluster: V-type ATP synthase subunit D; n=10;
Euryarchaeota|Rep: V-type ATP synthase subunit D -
Methanosarcina mazei (Methanosarcina frisia)
Length = 209
Score = 36.7 bits (81), Expect = 0.32
Identities = 27/113 (23%), Positives = 46/113 (40%)
Frame = +1
Query: 85 PSRGAQMLIKGRLAGAVKGHGLLKKKADALQVRFRMILSKIIETKTLMGEVMKEAAFSLA 264
P+R + +K ++ + GH LLK K D L + F IL++ +T + ++ +
Sbjct: 8 PTRSELINLKKKIKLSESGHKLLKMKRDGLILEFFKILNEARNVRTELDAAFAKSTEKIN 67
Query: 265 EAKFTTGDFNQVVLQNVTKAQIKIRSKKDNVAGVTLPIFESYQDGSDTYELGW 423
A G K +I+ N+ GV +P S YE G+
Sbjct: 68 LASAVNGMVAVRSTAFTAKESPEIQLSGHNIMGVVVPKISSTGVRKSLYERGY 120
>UniRef50_Q184E4 Cluster: V-type sodium ATP synthase subunit D;
n=15; Bacteria|Rep: V-type sodium ATP synthase subunit D
- Clostridium difficile (strain 630)
Length = 222
Score = 35.9 bits (79), Expect = 0.56
Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 4/121 (3%)
Frame = +1
Query: 70 RLAIFPSRGAQMLIKGRLAGAVKGHGLLKKKADALQVRFRMILSKIIETKTLMGEVMKEA 249
RL I P+R +K L A +GH LLK K D L +F I+ + + + A
Sbjct: 3 RLNINPTRMEMTRLKKLLKTATRGHKLLKDKLDELMKQFLEIVRENKRLREEAENALDTA 62
Query: 250 --AFSLAEAKFTTGDFNQVVLQNVTKAQIKIRSKKDNVAGVTLPIFE--SYQDGSDTYEL 417
F +A A + ++ + K + + N+ V +P+F+ + + SD Y
Sbjct: 63 YKNFIIARAVMSQEYLGSALM--MPKQSVSVDVSTRNIMSVDVPVFDFKTENNQSDIYPY 120
Query: 418 G 420
G
Sbjct: 121 G 121
>UniRef50_A7PSP8 Cluster: Chromosome chr6 scaffold_28, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr6 scaffold_28, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 150
Score = 35.5 bits (78), Expect = 0.74
Identities = 14/25 (56%), Positives = 21/25 (84%)
Frame = +1
Query: 301 VLQNVTKAQIKIRSKKDNVAGVTLP 375
VL+NV A +K+RS+++NVAGV +P
Sbjct: 34 VLENVQNASLKVRSRQENVAGVKVP 58
>UniRef50_Q1QKT6 Cluster: Glycosyl transferase, group 1; n=1;
Nitrobacter hamburgensis X14|Rep: Glycosyl transferase,
group 1 - Nitrobacter hamburgensis (strain X14 / DSM
10229)
Length = 770
Score = 35.1 bits (77), Expect = 0.98
Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 1/98 (1%)
Frame = +1
Query: 121 LAGAVKGHGLLKKKADALQVRFRMILSKIIETKTLMGEVMK-EAAFSLAEAKFTTGDFNQ 297
+AG V+G GL KK ++ ++ S+ K +M E++K E + K T +
Sbjct: 208 MAGLVRGFGLYKKNNPYSELSLAVVCSQSRAGKKVMSELLKSEDLKEGVDVKLTGYLAHD 267
Query: 298 VVLQNVTKAQIKIRSKKDNVAGVTLPIFESYQDGSDTY 411
+++ V A+ I G+ LPI ESY G+ +
Sbjct: 268 ELVKRVASARSSIFPSL--YEGLGLPILESYAAGTPVF 303
>UniRef50_Q6MAJ7 Cluster: Putative V-type sodium ATP synthase; n=1;
Candidatus Protochlamydia amoebophila UWE25|Rep:
Putative V-type sodium ATP synthase - Protochlamydia
amoebophila (strain UWE25)
Length = 215
Score = 33.9 bits (74), Expect = 2.3
Identities = 35/117 (29%), Positives = 49/117 (41%), Gaps = 9/117 (7%)
Frame = +1
Query: 151 LKKKADALQVRFRMILSKIIETKT-------LMGEVMKEAAF--SLAEAKFTTGDFNQVV 303
L+K LQ++ M+ S I ET+ LMG+ SL K T +
Sbjct: 21 LEKYLPTLQLKKAMLQSVIQETRIEIHRLEDLMGKKQDAVNMFSSLLAIKTTIDPMQAIQ 80
Query: 304 LQNVTKAQIKIRSKKDNVAGVTLPIFESYQDGSDTYELGWFGPWWAAACKAQEELPE 474
L+ V K + +N+AGV +P FE + + TY L PW AA L E
Sbjct: 81 LKTVFK-------RYENIAGVEIPYFEGIEFEAFTYSLFETSPWIDAAVLGLRSLVE 130
>UniRef50_Q5P1U0 Cluster: Putative uncharacterized protein; n=2;
Azoarcus|Rep: Putative uncharacterized protein -
Azoarcus sp. (strain EbN1) (Aromatoleum aromaticum
(strain EbN1))
Length = 368
Score = 33.9 bits (74), Expect = 2.3
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1
Query: 170 ASAFFLRRPWPFTAPARRPLINIWAPREGKIANLSFPDI 54
A RRP P + PA +P +IW P A +FPD+
Sbjct: 13 AGRLLARRPSPGSTPAAKPAPSIWQPVAAGAAAAAFPDL 51
>UniRef50_A2QR54 Cluster: Contig An08c0130, complete genome; n=2;
Aspergillus|Rep: Contig An08c0130, complete genome -
Aspergillus niger
Length = 1074
Score = 33.9 bits (74), Expect = 2.3
Identities = 31/99 (31%), Positives = 47/99 (47%), Gaps = 1/99 (1%)
Frame = -3
Query: 408 GIRTILV*LKDWEGDTSNIVL-LGPNLDLSLGNIL*HNLVEVSSCELSFSQRESSFFHYF 232
G++T L + W D S L LGP++ +L NI L+ ++ ++F+ SSF
Sbjct: 723 GMKTDLSRVSFWTADLSQPDLGLGPDVFKTLRNIA--TLIIHNAWAVNFNLSLSSFKPNL 780
Query: 231 THKGFSLNDFAQDHTEPHLKGISLLLEETMAFHCTSQAT 115
T +N AQ H PHL +S + TM H + T
Sbjct: 781 TGVVNLINFAAQSHQSPHLFFLS-SISSTMGHHTKTGLT 818
>UniRef50_Q9RWG6 Cluster: V-type ATP synthase subunit D; n=2;
Deinococcus|Rep: V-type ATP synthase subunit D -
Deinococcus radiodurans
Length = 224
Score = 33.9 bits (74), Expect = 2.3
Identities = 23/65 (35%), Positives = 31/65 (47%)
Frame = +1
Query: 79 IFPSRGAQMLIKGRLAGAVKGHGLLKKKADALQVRFRMILSKIIETKTLMGEVMKEAAFS 258
I P+R A + K L A G LLK+K DAL F ++ + + + V K A S
Sbjct: 5 ISPTRSALLASKASLKTANGGADLLKRKRDALIGEFFALVKDALAAREQLSSVSKGAYTS 64
Query: 259 LAEAK 273
L AK
Sbjct: 65 LFGAK 69
>UniRef50_A2YNI2 Cluster: MADS-box transcription factor 18; n=8;
Magnoliophyta|Rep: MADS-box transcription factor 18 -
Oryza sativa subsp. indica (Rice)
Length = 249
Score = 33.9 bits (74), Expect = 2.3
Identities = 21/72 (29%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Frame = +1
Query: 142 HGLLKKKADALQVRFRMILSKIIETKTL--MGEVMKEAAFSLAEAKFTTGDFNQVVLQNV 315
+G+LK K DALQ R +L + ++T T+ + ++ + +SL K NQ++ +++
Sbjct: 95 YGILKSKLDALQKSQRQLLGEQLDTLTIKELQQLEHQLEYSL---KHIRSKKNQLLFESI 151
Query: 316 TKAQIKIRSKKD 351
++ Q K +S K+
Sbjct: 152 SELQKKEKSLKN 163
>UniRef50_Q9A614 Cluster: Methyl-accepting chemotaxis protein McpE;
n=2; Caulobacter|Rep: Methyl-accepting chemotaxis
protein McpE - Caulobacter crescentus (Caulobacter
vibrioides)
Length = 781
Score = 33.5 bits (73), Expect = 3.0
Identities = 30/115 (26%), Positives = 46/115 (40%), Gaps = 5/115 (4%)
Frame = +1
Query: 88 SRGAQMLIKGRLAGAVKGHGLLKKKADALQVRFRMILSKIIETKTLMGEV---MKEAAFS 258
S A IKG ++ + + G K R IL ++ E L+GE+ KE A
Sbjct: 619 SADAAKEIKGLISASTQQVGKGVKLVGETGETLREILVQVAEINELVGEIAASSKEQAVG 678
Query: 259 LAEAKFTTGDFNQVVLQNVTKAQIKIRSKK--DNVAGVTLPIFESYQDGSDTYEL 417
LAE +QV QN + + N A + +Q G++ +EL
Sbjct: 679 LAEVNQAVNQMDQVTQQNAAMVEQSTAASHALSNEAAQLERLIGRFQVGAEVHEL 733
>UniRef50_A6R5H2 Cluster: Nucleolar protein NOP2; n=16; Fungi/Metazoa
group|Rep: Nucleolar protein NOP2 - Ajellomyces
capsulatus NAm1
Length = 1980
Score = 33.1 bits (72), Expect = 4.0
Identities = 18/60 (30%), Positives = 33/60 (55%)
Frame = +1
Query: 241 KEAAFSLAEAKFTTGDFNQVVLQNVTKAQIKIRSKKDNVAGVTLPIFESYQDGSDTYELG 420
++ A S EAK TT + +VV + + ++ + + N+AG T+ +FE +DG + G
Sbjct: 1521 EDEAISSTEAKLTTANIEEVV-EEQARLELNESAIQSNIAGHTMEVFE--EDGQPQKQTG 1577
>UniRef50_Q9HNE7 Cluster: V-type ATP synthase subunit D; n=8;
cellular organisms|Rep: V-type ATP synthase subunit D -
Halobacterium salinarium (Halobacterium halobium)
Length = 224
Score = 33.1 bits (72), Expect = 4.0
Identities = 26/103 (25%), Positives = 47/103 (45%)
Frame = +1
Query: 79 IFPSRGAQMLIKGRLAGAVKGHGLLKKKADALQVRFRMILSKIIETKTLMGEVMKEAAFS 258
I P+R M I+ R+ + +GH L++K D L + F IL + + ++ + + A
Sbjct: 5 IKPTRKNLMEIEDRIDLSERGHDTLEQKRDGLIMEFMDILDQSQDVRSGLEGDYETAQQK 64
Query: 259 LAEAKFTTGDFNQVVLQNVTKAQIKIRSKKDNVAGVTLPIFES 387
+ A+ GD + +I + N+ GV +P ES
Sbjct: 65 INMARAMEGDVAVSGAAAALEEYPEITVESMNIMGVVVPQIES 107
>UniRef50_Q2IKP8 Cluster: Putative uncharacterized protein; n=1;
Anaeromyxobacter dehalogenans 2CP-C|Rep: Putative
uncharacterized protein - Anaeromyxobacter dehalogenans
(strain 2CP-C)
Length = 499
Score = 32.7 bits (71), Expect = 5.2
Identities = 19/46 (41%), Positives = 22/46 (47%)
Frame = +1
Query: 373 PIFESYQDGSDTYELGWFGPWWAAACKAQEELPERCEAFGRVSVTA 510
PI E Y+ + W G W A AQ PE EA GR+ VTA
Sbjct: 273 PIREVYERLAAEQGREWIGWWRAVGPLAQVVAPELAEAAGRLEVTA 318
>UniRef50_A0TDV6 Cluster: Putative uncharacterized protein; n=1;
Burkholderia ambifaria MC40-6|Rep: Putative
uncharacterized protein - Burkholderia ambifaria MC40-6
Length = 351
Score = 32.7 bits (71), Expect = 5.2
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
Frame = -3
Query: 336 NLDLSLGNIL*HNLVEVSSCELSFSQRESSFFHYF----THKGFSLNDFAQDHTEPHLKG 169
N+ + + N L HN V S ++ + E FF YF TH+ F + +D E +
Sbjct: 202 NIYIDINNFLKHNAVPYLSTKIEIFEEERRFFSYFEIKHTHRDFLKDGILKDLVETSFEK 261
Query: 168 ISLLLE 151
+ LE
Sbjct: 262 LKTDLE 267
>UniRef50_Q23AQ5 Cluster: Cation channel family protein; n=7;
Eukaryota|Rep: Cation channel family protein -
Tetrahymena thermophila SB210
Length = 2320
Score = 32.7 bits (71), Expect = 5.2
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +1
Query: 208 IETKTLMGEVMKEAAFSLAEAKFTTGDFNQVVLQNVTKAQIKI 336
+E+K+ + E+M+E FS E F GD + L + K +KI
Sbjct: 428 LESKSKIVEIMEECLFSPGEYIFQQGDLDDSALYYIVKGSVKI 470
Score = 32.7 bits (71), Expect = 5.2
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +1
Query: 208 IETKTLMGEVMKEAAFSLAEAKFTTGDFNQVVLQNVTKAQIKI 336
+E+K+ + E+M+E FS E F GD + L + K +KI
Sbjct: 1562 LESKSKIVEIMEECLFSPGEYIFQQGDLDDSALYYIVKGSVKI 1604
>UniRef50_Q6SA09 Cluster: OATP-I; n=7; Murinae|Rep: OATP-I - Mus
musculus (Mouse)
Length = 709
Score = 32.3 bits (70), Expect = 6.9
Identities = 17/48 (35%), Positives = 30/48 (62%)
Frame = +2
Query: 350 TMLLVSPSQSLSHTRMVLIPMSWAGLARGGQQLAKLKKNFQSAVKLLV 493
+ L+SPS++ T ++L+P S G GG ++KLK + +S +K +V
Sbjct: 414 SQFLLSPSRATLLTGIILVPGSALGNFLGGFIVSKLKMSSRSQMKFIV 461
>UniRef50_Q0AYR3 Cluster:
UDP-N-acetylmuramoylalanyl-D-glutamate--2,
6-diaminopimelate ligase; n=1; Syntrophomonas wolfei
subsp. wolfei str. Goettingen|Rep:
UDP-N-acetylmuramoylalanyl-D-glutamate--2,
6-diaminopimelate ligase - Syntrophomonas wolfei subsp.
wolfei (strain Goettingen)
Length = 489
Score = 32.3 bits (70), Expect = 6.9
Identities = 19/86 (22%), Positives = 35/86 (40%)
Frame = +1
Query: 235 VMKEAAFSLAEAKFTTGDFNQVVLQNVTKAQIKIRSKKDNVAGVTLPIFESYQDGSDTYE 414
VM+ ++ +L + DFN V N+T+ + DN L +F+ ++ Y
Sbjct: 175 VMEVSSHALQLQRVAEIDFNVAVFTNLTQDHLDFHQNMDNYRAAKLQLFQMIKEEKQNYA 234
Query: 415 LGWFGPWWAAACKAQEELPERCEAFG 492
+ WA +P C ++G
Sbjct: 235 IINIDDPWAEEIFQAATIP--CRSYG 258
>UniRef50_Q23AQ6 Cluster: Cation channel family protein; n=1;
Tetrahymena thermophila SB210|Rep: Cation channel family
protein - Tetrahymena thermophila SB210
Length = 2636
Score = 32.3 bits (70), Expect = 6.9
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +1
Query: 208 IETKTLMGEVMKEAAFSLAEAKFTTGDFNQVVLQNVTKAQIKI 336
+E+K+ + E+M+E FS E F GD + L + K +KI
Sbjct: 1953 LESKSKIVEIMEECLFSPGEYIFKQGDLDDCSLYYIVKGSVKI 1995
>UniRef50_Q96FW1-2 Cluster: Isoform 2 of Q96FW1 ; n=1; Homo
sapiens|Rep: Isoform 2 of Q96FW1 - Homo sapiens (Human)
Length = 315
Score = 31.9 bits (69), Expect = 9.2
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 267 FSQRESSFFHYFTHKGFSLNDFAQDHTEPHLK 172
+ QRES FF +F G ++ +F Q EP K
Sbjct: 226 YLQRESKFFEHFIEGGRTVKEFCQQEVEPMCK 257
>UniRef50_Q96FW1 Cluster: Ubiquitin thioesterase OTUB1; n=37;
Eumetazoa|Rep: Ubiquitin thioesterase OTUB1 - Homo
sapiens (Human)
Length = 271
Score = 31.9 bits (69), Expect = 9.2
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 267 FSQRESSFFHYFTHKGFSLNDFAQDHTEPHLK 172
+ QRES FF +F G ++ +F Q EP K
Sbjct: 182 YLQRESKFFEHFIEGGRTVKEFCQQEVEPMCK 213
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 523,942,141
Number of Sequences: 1657284
Number of extensions: 10363049
Number of successful extensions: 26137
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 25310
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26126
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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