Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS302B02f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069116-1|AAL39261.1|  246|Drosophila melanogaster GH12958p pro...   224   7e-59
AF218238-1|AAG13186.1|  246|Drosophila melanogaster vacuolar pro...   224   7e-59
AE013599-2075|AAF58126.1|  246|Drosophila melanogaster CG8186-PA...   224   7e-59
AL138972-6|CAB72289.1|  249|Drosophila melanogaster EG:BACR25B3....   212   3e-55
AE014298-411|AAG22401.2|  249|Drosophila melanogaster CG8310-PA ...   212   3e-55
AE013599-1430|AAF58545.1|  373|Drosophila melanogaster CG13167-P...    65   6e-11
AY075304-1|AAL68171.1|  373|Drosophila melanogaster AT31643p pro...    64   8e-11
AY069555-1|AAL39700.1|  639|Drosophila melanogaster LD28458p pro...    29   2.9  
AE014297-3277|AAF56101.2|  639|Drosophila melanogaster CG31365-P...    29   2.9  

>AY069116-1|AAL39261.1|  246|Drosophila melanogaster GH12958p
           protein.
          Length = 246

 Score =  224 bits (547), Expect = 7e-59
 Identities = 109/121 (90%), Positives = 116/121 (95%)
 Frame = +1

Query: 55  MSGKDRLAIFPSRGAQMLIKGRLAGAVKGHGLLKKKADALQVRFRMILSKIIETKTLMGE 234
           MSGKDRL IFPSRGAQML+K RLAGA KGHGLLKKKADALQ+RFR+IL KIIETKTLMG+
Sbjct: 1   MSGKDRLPIFPSRGAQMLMKARLAGAQKGHGLLKKKADALQMRFRLILGKIIETKTLMGD 60

Query: 235 VMKEAAFSLAEAKFTTGDFNQVVLQNVTKAQIKIRSKKDNVAGVTLPIFESYQDGSDTYE 414
           VMKEAAFSLAEAKFT+GD NQVVLQNVTKAQIKIR+KKDNVAGVTLP+FESYQDGSDTYE
Sbjct: 61  VMKEAAFSLAEAKFTSGDINQVVLQNVTKAQIKIRTKKDNVAGVTLPVFESYQDGSDTYE 120

Query: 415 L 417
           L
Sbjct: 121 L 121



 Score = 64.5 bits (150), Expect = 8e-11
 Identities = 32/33 (96%), Positives = 33/33 (100%)
 Frame = +2

Query: 419 AGLARGGQQLAKLKKNFQSAVKLLVELASLQTS 517
           AGLARGGQQLAKLKKN+QSAVKLLVELASLQTS
Sbjct: 122 AGLARGGQQLAKLKKNYQSAVKLLVELASLQTS 154


>AF218238-1|AAG13186.1|  246|Drosophila melanogaster vacuolar
           proton-translocatingATPase subunit D protein.
          Length = 246

 Score =  224 bits (547), Expect = 7e-59
 Identities = 109/121 (90%), Positives = 116/121 (95%)
 Frame = +1

Query: 55  MSGKDRLAIFPSRGAQMLIKGRLAGAVKGHGLLKKKADALQVRFRMILSKIIETKTLMGE 234
           MSGKDRL IFPSRGAQML+K RLAGA KGHGLLKKKADALQ+RFR+IL KIIETKTLMG+
Sbjct: 1   MSGKDRLPIFPSRGAQMLMKARLAGAQKGHGLLKKKADALQMRFRLILGKIIETKTLMGD 60

Query: 235 VMKEAAFSLAEAKFTTGDFNQVVLQNVTKAQIKIRSKKDNVAGVTLPIFESYQDGSDTYE 414
           VMKEAAFSLAEAKFT+GD NQVVLQNVTKAQIKIR+KKDNVAGVTLP+FESYQDGSDTYE
Sbjct: 61  VMKEAAFSLAEAKFTSGDINQVVLQNVTKAQIKIRTKKDNVAGVTLPVFESYQDGSDTYE 120

Query: 415 L 417
           L
Sbjct: 121 L 121



 Score = 64.5 bits (150), Expect = 8e-11
 Identities = 32/33 (96%), Positives = 33/33 (100%)
 Frame = +2

Query: 419 AGLARGGQQLAKLKKNFQSAVKLLVELASLQTS 517
           AGLARGGQQLAKLKKN+QSAVKLLVELASLQTS
Sbjct: 122 AGLARGGQQLAKLKKNYQSAVKLLVELASLQTS 154


>AE013599-2075|AAF58126.1|  246|Drosophila melanogaster CG8186-PA
           protein.
          Length = 246

 Score =  224 bits (547), Expect = 7e-59
 Identities = 109/121 (90%), Positives = 116/121 (95%)
 Frame = +1

Query: 55  MSGKDRLAIFPSRGAQMLIKGRLAGAVKGHGLLKKKADALQVRFRMILSKIIETKTLMGE 234
           MSGKDRL IFPSRGAQML+K RLAGA KGHGLLKKKADALQ+RFR+IL KIIETKTLMG+
Sbjct: 1   MSGKDRLPIFPSRGAQMLMKARLAGAQKGHGLLKKKADALQMRFRLILGKIIETKTLMGD 60

Query: 235 VMKEAAFSLAEAKFTTGDFNQVVLQNVTKAQIKIRSKKDNVAGVTLPIFESYQDGSDTYE 414
           VMKEAAFSLAEAKFT+GD NQVVLQNVTKAQIKIR+KKDNVAGVTLP+FESYQDGSDTYE
Sbjct: 61  VMKEAAFSLAEAKFTSGDINQVVLQNVTKAQIKIRTKKDNVAGVTLPVFESYQDGSDTYE 120

Query: 415 L 417
           L
Sbjct: 121 L 121



 Score = 64.5 bits (150), Expect = 8e-11
 Identities = 32/33 (96%), Positives = 33/33 (100%)
 Frame = +2

Query: 419 AGLARGGQQLAKLKKNFQSAVKLLVELASLQTS 517
           AGLARGGQQLAKLKKN+QSAVKLLVELASLQTS
Sbjct: 122 AGLARGGQQLAKLKKNYQSAVKLLVELASLQTS 154


>AL138972-6|CAB72289.1|  249|Drosophila melanogaster EG:BACR25B3.4
           protein.
          Length = 249

 Score =  212 bits (517), Expect = 3e-55
 Identities = 103/121 (85%), Positives = 110/121 (90%)
 Frame = +1

Query: 55  MSGKDRLAIFPSRGAQMLIKGRLAGAVKGHGLLKKKADALQVRFRMILSKIIETKTLMGE 234
           M+ KDRL IFPSRGAQ L+K RLAGA KGHGLLKKKADALQ+RFR+IL KIIETKTLMG+
Sbjct: 1   MAAKDRLPIFPSRGAQTLMKSRLAGATKGHGLLKKKADALQMRFRLILGKIIETKTLMGQ 60

Query: 235 VMKEAAFSLAEAKFTTGDFNQVVLQNVTKAQIKIRSKKDNVAGVTLPIFESYQDGSDTYE 414
           VMKEAAFSLAE KFTTGD NQ+VLQNVTKAQIKIR+KKDNVAGVTLPIFE Y DG DTYE
Sbjct: 61  VMKEAAFSLAEVKFTTGDINQIVLQNVTKAQIKIRTKKDNVAGVTLPIFEPYTDGVDTYE 120

Query: 415 L 417
           L
Sbjct: 121 L 121



 Score = 62.1 bits (144), Expect = 4e-10
 Identities = 30/33 (90%), Positives = 33/33 (100%)
 Frame = +2

Query: 419 AGLARGGQQLAKLKKNFQSAVKLLVELASLQTS 517
           AGLARGGQQLAKLKKN+QSAV+LLV+LASLQTS
Sbjct: 122 AGLARGGQQLAKLKKNYQSAVRLLVQLASLQTS 154


>AE014298-411|AAG22401.2|  249|Drosophila melanogaster CG8310-PA
           protein.
          Length = 249

 Score =  212 bits (517), Expect = 3e-55
 Identities = 103/121 (85%), Positives = 110/121 (90%)
 Frame = +1

Query: 55  MSGKDRLAIFPSRGAQMLIKGRLAGAVKGHGLLKKKADALQVRFRMILSKIIETKTLMGE 234
           M+ KDRL IFPSRGAQ L+K RLAGA KGHGLLKKKADALQ+RFR+IL KIIETKTLMG+
Sbjct: 1   MAAKDRLPIFPSRGAQTLMKSRLAGATKGHGLLKKKADALQMRFRLILGKIIETKTLMGQ 60

Query: 235 VMKEAAFSLAEAKFTTGDFNQVVLQNVTKAQIKIRSKKDNVAGVTLPIFESYQDGSDTYE 414
           VMKEAAFSLAE KFTTGD NQ+VLQNVTKAQIKIR+KKDNVAGVTLPIFE Y DG DTYE
Sbjct: 61  VMKEAAFSLAEVKFTTGDINQIVLQNVTKAQIKIRTKKDNVAGVTLPIFEPYTDGVDTYE 120

Query: 415 L 417
           L
Sbjct: 121 L 121



 Score = 62.1 bits (144), Expect = 4e-10
 Identities = 30/33 (90%), Positives = 33/33 (100%)
 Frame = +2

Query: 419 AGLARGGQQLAKLKKNFQSAVKLLVELASLQTS 517
           AGLARGGQQLAKLKKN+QSAV+LLV+LASLQTS
Sbjct: 122 AGLARGGQQLAKLKKNYQSAVRLLVQLASLQTS 154


>AE013599-1430|AAF58545.1|  373|Drosophila melanogaster CG13167-PA
           protein.
          Length = 373

 Score = 64.9 bits (151), Expect = 6e-11
 Identities = 40/122 (32%), Positives = 64/122 (52%), Gaps = 1/122 (0%)
 Frame = +1

Query: 55  MSGKDRLAIFPSRGAQMLIKGRLAGAVKGHGLLKKKADALQVRFRMILSKIIETKTLMG- 231
           M+ +D L IFPSR   +++K R+  A +G GLLK+K DA+ ++ R  L +I   + + G 
Sbjct: 1   MAKRDILPIFPSRANSVIMKQRVLAARRGVGLLKRKRDAIDMKLRE-LRRIRFDQDMHGD 59

Query: 232 EVMKEAAFSLAEAKFTTGDFNQVVLQNVTKAQIKIRSKKDNVAGVTLPIFESYQDGSDTY 411
           E M+ A FS+A+A     DF   ++     A + +R  +  + GV L   E    G   +
Sbjct: 60  EAMRNAIFSMAKANLLGADFKPQMVSRSHVATVSLRRTEIKIVGVKLNTLELETKGVGAF 119

Query: 412 EL 417
            L
Sbjct: 120 PL 121



 Score = 34.3 bits (75), Expect = 0.10
 Identities = 14/31 (45%), Positives = 24/31 (77%)
 Frame = +2

Query: 419 AGLARGGQQLAKLKKNFQSAVKLLVELASLQ 511
           AGL+ GG Q+++++ ++  A+K LVE ASL+
Sbjct: 122 AGLSCGGMQVSRIRDSYTKALKALVEFASLE 152


>AY075304-1|AAL68171.1|  373|Drosophila melanogaster AT31643p
           protein.
          Length = 373

 Score = 64.5 bits (150), Expect = 8e-11
 Identities = 39/122 (31%), Positives = 64/122 (52%), Gaps = 1/122 (0%)
 Frame = +1

Query: 55  MSGKDRLAIFPSRGAQMLIKGRLAGAVKGHGLLKKKADALQVRFRMILSKIIETKTLMG- 231
           M+ +D L +FPSR   +++K R+  A +G GLLK+K DA+ ++ R  L +I   + + G 
Sbjct: 1   MAKRDILPVFPSRANSVIMKQRVLAARRGVGLLKRKRDAIDMKLRE-LRRIRFDQDMHGD 59

Query: 232 EVMKEAAFSLAEAKFTTGDFNQVVLQNVTKAQIKIRSKKDNVAGVTLPIFESYQDGSDTY 411
           E M+ A FS+A+A     DF   ++     A + +R  +  + GV L   E    G   +
Sbjct: 60  EAMRNAIFSMAKANLLGADFKPQMVSRSHVATVSLRRTEIKIVGVKLNTLELETKGVGAF 119

Query: 412 EL 417
            L
Sbjct: 120 PL 121



 Score = 34.3 bits (75), Expect = 0.10
 Identities = 14/31 (45%), Positives = 24/31 (77%)
 Frame = +2

Query: 419 AGLARGGQQLAKLKKNFQSAVKLLVELASLQ 511
           AGL+ GG Q+++++ ++  A+K LVE ASL+
Sbjct: 122 AGLSCGGMQVSRIRDSYTKALKALVEFASLE 152


>AY069555-1|AAL39700.1|  639|Drosophila melanogaster LD28458p
           protein.
          Length = 639

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 14/22 (63%), Positives = 14/22 (63%)
 Frame = -3

Query: 285 SSCELSFSQRESSFFHYFTHKG 220
           S CELSFSQRE    H  TH G
Sbjct: 514 SECELSFSQREVLKRHMDTHTG 535


>AE014297-3277|AAF56101.2|  639|Drosophila melanogaster CG31365-PA
           protein.
          Length = 639

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 14/22 (63%), Positives = 14/22 (63%)
 Frame = -3

Query: 285 SSCELSFSQRESSFFHYFTHKG 220
           S CELSFSQRE    H  TH G
Sbjct: 514 SECELSFSQREVLKRHMDTHTG 535


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,257,729
Number of Sequences: 53049
Number of extensions: 481000
Number of successful extensions: 1332
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1211
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1330
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)