Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS302B02f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    23   2.5  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    23   2.5  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   5.8  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   7.7  

>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 13/48 (27%), Positives = 18/48 (37%)
 Frame = +1

Query: 376 IFESYQDGSDTYELGWFGPWWAAACKAQEELPERCEAFGRVSVTADFF 519
           +F   ++ S   ELGWF    AA        P    +    S  + FF
Sbjct: 53  LFSGPEESSGGVELGWFNDSAAAITSTSPSYPGGGSSSPSPSSPSSFF 100


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = +3

Query: 300 CATKCYQGSNQD*VQEGQCCW 362
           C+  C  G  +  V   QCCW
Sbjct: 587 CSLPCEVGQAKKYVAGEQCCW 607


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = -1

Query: 203 LLKIIRNLT*RASAFFLRRPWPFTAPAR 120
           L+  I ++      FFLR+ +PF  P++
Sbjct: 220 LIYFIEDIGLNTYYFFLRQAFPFWLPSK 247


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -1

Query: 161 FFLRRPWPFTAPAR 120
           FFLR+ +PF  P++
Sbjct: 234 FFLRQAFPFWLPSK 247


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,314
Number of Sequences: 438
Number of extensions: 2761
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)