Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS302B01f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    25   0.31 
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    25   0.31 
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    22   3.8  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   6.6  

>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 25.4 bits (53), Expect = 0.31
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = -2

Query: 454 CIFVLYNAWFLEKKDSTAPYTV*KIVKVDKHNNFK 350
           CI+V    ++LEKK +   +   K V  ++  NFK
Sbjct: 230 CIYVFNPRYYLEKKVTRRLHRFTKSVIAERQENFK 264



 Score = 22.2 bits (45), Expect = 2.9
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -2

Query: 214 AVVFSIFVLKYLYELNNNHLTHDLAYLYKP 125
           A VF +F L Y Y+    H+   ++  Y P
Sbjct: 11  AAVFLLFYLFYCYKTIKQHIYSLISLSYLP 40


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 25.4 bits (53), Expect = 0.31
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = -2

Query: 454 CIFVLYNAWFLEKKDSTAPYTV*KIVKVDKHNNFK 350
           CI+V    ++LEKK +   +   K V  ++  NFK
Sbjct: 230 CIYVFNPRYYLEKKVTRRLHRFTKSVIAERQENFK 264



 Score = 22.2 bits (45), Expect = 2.9
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -2

Query: 214 AVVFSIFVLKYLYELNNNHLTHDLAYLYKP 125
           A VF +F L Y Y+    H+   ++  Y P
Sbjct: 11  AAVFLLFYLFYCYKTIKQHIYSLISLSYLP 40


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +3

Query: 189 NTKIENTTA*FRVYIRHFDNFTYSVLINN 275
           N +++NT    ++   H+  +  SVLI+N
Sbjct: 132 NARVKNTALWKQLRYEHYRLYQLSVLIDN 160


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -2

Query: 94  TVRIRLSQFYYLYL*SFGNSSL 29
           T  I ++QFYY Y   F + +L
Sbjct: 243 TFSICITQFYYCYDSGFNSDNL 264


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,270
Number of Sequences: 336
Number of extensions: 1766
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)