Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS302A12f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    32   0.004
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    22   2.9  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    22   2.9  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    22   3.8  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    22   3.8  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          21   5.0  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           21   5.0  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 31.9 bits (69), Expect = 0.004
 Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
 Frame = -1

Query: 434 FTLCIFRFLCCLVL*VIR-VYCFIFIGLQYMSVRGYCVLCYQYFXXXXXXXIPTVRRFRF 258
           F LCI+ F C  ++  +  ++C  FI   + ++    +LC  YF       +P +  F  
Sbjct: 162 FLLCIYHFFCAFIIFTMHLLFCCAFI---FFNMHLLFLLCLDYF-TLHLLFLPCIYYFYS 217

Query: 257 LFVFHSVGR*RLCFFCFVV 201
            F+  ++    L F+C ++
Sbjct: 218 AFIIFTI---HLLFYCVLI 233



 Score = 24.6 bits (51), Expect = 0.54
 Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
 Frame = -1

Query: 434 FTLCIFRFLCCL-VL*VIRVYCFIFI 360
           F LCI+ F C L +L  I  +C  FI
Sbjct: 281 FLLCIYYFYCALIILLCIYYFCRAFI 306



 Score = 21.4 bits (43), Expect = 5.0
 Identities = 7/25 (28%), Positives = 13/25 (52%)
 Frame = -1

Query: 434 FTLCIFRFLCCLVL*VIRVYCFIFI 360
           F LCI+ F C  ++  + +   + I
Sbjct: 142 FLLCIYYFYCAFIIFTVHLLFLLCI 166


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 8/28 (28%), Positives = 17/28 (60%)
 Frame = -1

Query: 161 SLFSILFYRCILSLVGTFKIFTITCSHF 78
           +LF+ +F  C++ + G   +  +TC +F
Sbjct: 233 ALFNDVFGTCLILITGKSIVQLLTCLNF 260


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 8/28 (28%), Positives = 17/28 (60%)
 Frame = -1

Query: 161 SLFSILFYRCILSLVGTFKIFTITCSHF 78
           +LF+ +F  C++ + G   +  +TC +F
Sbjct: 233 ALFNDVFGTCLILITGKSIVQLLTCLNF 260


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -3

Query: 498 YRDPQSYYHLVPNHQNHPN 442
           Y +PQ  Y+   NH N  N
Sbjct: 352 YPNPQQQYYYNKNHPNSEN 370


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -3

Query: 498 YRDPQSYYHLVPNHQNHPN 442
           Y +PQ  Y+   NH N  N
Sbjct: 300 YPNPQQQYYYNKNHPNSEN 318


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -3

Query: 309 FHHHQYQNHPNRQKI*VPLCFSQCR*MKIVF 217
           FHH +Y + P R +I   L  S+ R +KI F
Sbjct: 107 FHHGKYLSRPRRIQIAENLNLSE-RQIKIWF 136


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -3

Query: 309 FHHHQYQNHPNRQKI*VPLCFSQCR*MKIVF 217
           FHH +Y + P R +I   L  S+ R +KI F
Sbjct: 98  FHHGKYLSRPRRIQIAENLNLSE-RQIKIWF 127


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,354
Number of Sequences: 336
Number of extensions: 2229
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)