Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS302A12f
         (521 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X94453-1|CAA64224.1|  795|Homo sapiens pyrroline 5-carboxylate s...    31   2.4  
U76542-1|AAD17454.1|  795|Homo sapiens pyrroline-5-carboxylate s...    31   2.4  
U68758-1|AAD00169.1|  793|Homo sapiens pyrroline-5-carboxylate s...    31   2.4  
BC117242-1|AAI17243.1|  795|Homo sapiens aldehyde dehydrogenase ...    31   2.4  
BC117240-1|AAI17241.1|  795|Homo sapiens aldehyde dehydrogenase ...    31   2.4  
BC106054-1|AAI06055.1|  795|Homo sapiens aldehyde dehydrogenase ...    31   2.4  
AL356632-3|CAI16765.1|  793|Homo sapiens aldehyde dehydrogenase ...    31   2.4  
AL356632-2|CAI16766.1|  795|Homo sapiens aldehyde dehydrogenase ...    31   2.4  

>X94453-1|CAA64224.1|  795|Homo sapiens pyrroline 5-carboxylate
           synthetase protein.
          Length = 795

 Score = 31.1 bits (67), Expect = 2.4
 Identities = 10/27 (37%), Positives = 22/27 (81%)
 Frame = +1

Query: 382 RITHKTRQQRNLKIQRVKIPVGMILMI 462
           R+  +TR  +NL++++V +P+G++L+I
Sbjct: 453 RVLRRTRIAKNLELEQVTVPIGVLLVI 479


>U76542-1|AAD17454.1|  795|Homo sapiens pyrroline-5-carboxylate
           synthase long form protein.
          Length = 795

 Score = 31.1 bits (67), Expect = 2.4
 Identities = 10/27 (37%), Positives = 22/27 (81%)
 Frame = +1

Query: 382 RITHKTRQQRNLKIQRVKIPVGMILMI 462
           R+  +TR  +NL++++V +P+G++L+I
Sbjct: 453 RVLRRTRIAKNLELEQVTVPIGVLLVI 479


>U68758-1|AAD00169.1|  793|Homo sapiens pyrroline-5-carboxylate
           synthase protein.
          Length = 793

 Score = 31.1 bits (67), Expect = 2.4
 Identities = 10/27 (37%), Positives = 22/27 (81%)
 Frame = +1

Query: 382 RITHKTRQQRNLKIQRVKIPVGMILMI 462
           R+  +TR  +NL++++V +P+G++L+I
Sbjct: 451 RVLRRTRIAKNLELEQVTVPIGVLLVI 477


>BC117242-1|AAI17243.1|  795|Homo sapiens aldehyde dehydrogenase 18
           family, member A1 protein.
          Length = 795

 Score = 31.1 bits (67), Expect = 2.4
 Identities = 10/27 (37%), Positives = 22/27 (81%)
 Frame = +1

Query: 382 RITHKTRQQRNLKIQRVKIPVGMILMI 462
           R+  +TR  +NL++++V +P+G++L+I
Sbjct: 453 RVLRRTRIAKNLELEQVTVPIGVLLVI 479


>BC117240-1|AAI17241.1|  795|Homo sapiens aldehyde dehydrogenase 18
           family, member A1 protein.
          Length = 795

 Score = 31.1 bits (67), Expect = 2.4
 Identities = 10/27 (37%), Positives = 22/27 (81%)
 Frame = +1

Query: 382 RITHKTRQQRNLKIQRVKIPVGMILMI 462
           R+  +TR  +NL++++V +P+G++L+I
Sbjct: 453 RVLRRTRIAKNLELEQVTVPIGVLLVI 479


>BC106054-1|AAI06055.1|  795|Homo sapiens aldehyde dehydrogenase 18
           family, member A1 protein.
          Length = 795

 Score = 31.1 bits (67), Expect = 2.4
 Identities = 10/27 (37%), Positives = 22/27 (81%)
 Frame = +1

Query: 382 RITHKTRQQRNLKIQRVKIPVGMILMI 462
           R+  +TR  +NL++++V +P+G++L+I
Sbjct: 453 RVLRRTRIAKNLELEQVTVPIGVLLVI 479


>AL356632-3|CAI16765.1|  793|Homo sapiens aldehyde dehydrogenase 18
           family, member A1 protein.
          Length = 793

 Score = 31.1 bits (67), Expect = 2.4
 Identities = 10/27 (37%), Positives = 22/27 (81%)
 Frame = +1

Query: 382 RITHKTRQQRNLKIQRVKIPVGMILMI 462
           R+  +TR  +NL++++V +P+G++L+I
Sbjct: 451 RVLRRTRIAKNLELEQVTVPIGVLLVI 477


>AL356632-2|CAI16766.1|  795|Homo sapiens aldehyde dehydrogenase 18
           family, member A1 protein.
          Length = 795

 Score = 31.1 bits (67), Expect = 2.4
 Identities = 10/27 (37%), Positives = 22/27 (81%)
 Frame = +1

Query: 382 RITHKTRQQRNLKIQRVKIPVGMILMI 462
           R+  +TR  +NL++++V +P+G++L+I
Sbjct: 453 RVLRRTRIAKNLELEQVTVPIGVLLVI 479


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,777,803
Number of Sequences: 237096
Number of extensions: 1041646
Number of successful extensions: 1921
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1873
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1918
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)