Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS302A11f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical pr... 100 7e-22
U39653-2|AAM69064.1| 1092|Caenorhabditis elegans Hypothetical pr... 31 0.38
U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical pr... 31 0.38
L15188-6|AAA27950.2| 1132|Caenorhabditis elegans Gex interacting... 29 1.5
L15188-5|AAA27949.3| 1780|Caenorhabditis elegans Gex interacting... 29 1.5
L15188-4|AAM22026.1| 1697|Caenorhabditis elegans Gex interacting... 29 1.5
AF125959-2|AAD14732.1| 531|Caenorhabditis elegans Udp-glucurono... 27 8.1
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 27 8.1
>Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical
protein ZK20.3 protein.
Length = 372
Score = 100 bits (239), Expect = 7e-22
Identities = 56/127 (44%), Positives = 82/127 (64%), Gaps = 2/127 (1%)
Frame = -1
Query: 521 PQFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQEAFVRMLNEPVNPSAAGVASD 342
PQ ++RA+IQQNP +L AVLQQ+ NP L+Q I +Q+AF+ +LN AG A+
Sbjct: 252 PQLAEIRALIQQNPEMLAAVLQQLAAVNPRLVQTIQNNQQAFMDLLNG--GAQGAGAAAG 309
Query: 341 ENVADIQQPQLGSQNVIQVSAQDKEAIERLKAL--GFPEHMVIQAYFACEKNENLAANFL 168
N + P+ ++VI +S ++ AIER+KA+ PE +V++AYFAC+KNE A NF+
Sbjct: 310 -NAPERNTPR---RHVIHLSPEEAAAIERIKAIVVNAPEAVVVEAYFACDKNEEAAINFI 365
Query: 167 LSQNFDD 147
S N D+
Sbjct: 366 FS-NLDE 371
Score = 29.1 bits (62), Expect = 2.0
Identities = 19/78 (24%), Positives = 33/78 (42%)
Frame = -1
Query: 380 EPVNPSAAGVASDENVADIQQPQLGSQNVIQVSAQDKEAIERLKALGFPEHMVIQAYFAC 201
EPV +AA ++ AD+ ++ + +E + + +G+ I A A
Sbjct: 143 EPVPVAAAPASNPAPAADVAPEAAAPAEAEALTDEQEENVLAITGMGYDREQTIAALRAA 202
Query: 200 EKNENLAANFLLSQNFDD 147
N + A FLL+ DD
Sbjct: 203 FWNPDRAVEFLLNGLPDD 220
>U39653-2|AAM69064.1| 1092|Caenorhabditis elegans Hypothetical protein
T13H2.5b protein.
Length = 1092
Score = 31.5 bits (68), Expect = 0.38
Identities = 24/70 (34%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Frame = -1
Query: 518 QFQQMRAVIQQN--PNLLNAVLQQIGQTNPALLQVISQHQEAFVRMLNEPVNPSAAGVAS 345
Q QQ + + QQ PN+ +A LQQ Q QV+ Q+ V PV P A VA
Sbjct: 864 QMQQQQQLAQQGLVPNVSSAWLQQQAQLAQQQQQVVQQNLLMRVPSAQTPVAPRAPTVAP 923
Query: 344 DENVADIQQP 315
V P
Sbjct: 924 QSVVQQAPAP 933
>U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical protein
T13H2.5a protein.
Length = 2471
Score = 31.5 bits (68), Expect = 0.38
Identities = 24/70 (34%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Frame = -1
Query: 518 QFQQMRAVIQQN--PNLLNAVLQQIGQTNPALLQVISQHQEAFVRMLNEPVNPSAAGVAS 345
Q QQ + + QQ PN+ +A LQQ Q QV+ Q+ V PV P A VA
Sbjct: 2243 QMQQQQQLAQQGLVPNVSSAWLQQQAQLAQQQQQVVQQNLLMRVPSAQTPVAPRAPTVAP 2302
Query: 344 DENVADIQQP 315
V P
Sbjct: 2303 QSVVQQAPAP 2312
>L15188-6|AAA27950.2| 1132|Caenorhabditis elegans Gex interacting
protein protein8, isoform a protein.
Length = 1132
Score = 29.5 bits (63), Expect = 1.5
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -1
Query: 515 FQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQE 402
F+Q + QQ P N ++QQ+G NP L ++ Q Q+
Sbjct: 870 FKQQQQQQQQQPQQSN-LMQQLGNINPQFLALLLQQQQ 906
Score = 28.7 bits (61), Expect = 2.7
Identities = 26/84 (30%), Positives = 32/84 (38%)
Frame = -1
Query: 518 QFQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQEAFVRMLNEPVNPSAAGVASDE 339
QF Q IQQNP L+NA Q I Q +Q +Q Q A A A E
Sbjct: 960 QFPQFPQAIQQNPLLMNAQHQLILQQQQLAMQ-HAQAQAAQAAQAQAAQAAQAQAQAQAE 1018
Query: 338 NVADIQQPQLGSQNVIQVSAQDKE 267
Q Q +Q Q Q ++
Sbjct: 1019 AKLKTQAAQAKAQADAQARVQTQQ 1042
>L15188-5|AAA27949.3| 1780|Caenorhabditis elegans Gex interacting
protein protein8, isoform b protein.
Length = 1780
Score = 29.5 bits (63), Expect = 1.5
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -1
Query: 515 FQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQE 402
F+Q + QQ P N ++QQ+G NP L ++ Q Q+
Sbjct: 870 FKQQQQQQQQQPQQSN-LMQQLGNINPQFLALLLQQQQ 906
>L15188-4|AAM22026.1| 1697|Caenorhabditis elegans Gex interacting
protein protein8, isoform c protein.
Length = 1697
Score = 29.5 bits (63), Expect = 1.5
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -1
Query: 515 FQQMRAVIQQNPNLLNAVLQQIGQTNPALLQVISQHQE 402
F+Q + QQ P N ++QQ+G NP L ++ Q Q+
Sbjct: 870 FKQQQQQQQQQPQQSN-LMQQLGNINPQFLALLLQQQQ 906
>AF125959-2|AAD14732.1| 531|Caenorhabditis elegans
Udp-glucuronosyltransferase protein8 protein.
Length = 531
Score = 27.1 bits (57), Expect = 8.1
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 135 VKNLVIKILRQQKVSCKILIFFTSKIGLYHHMF 233
VKNL+ +L VSCK ++ F GL H F
Sbjct: 3 VKNLLSILLVLGSVSCKNILIFNPIFGLSHVKF 35
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 27.1 bits (57), Expect = 8.1
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = -1
Query: 368 PSAAGVASDENVADIQQPQLGSQNVIQVSAQDKEAI 261
PS++ V+S + Q+P S NV+++S + I
Sbjct: 1103 PSSSSVSSSGSDLQTQEPTQASSNVVEISEESSSPI 1138
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,017,448
Number of Sequences: 27780
Number of extensions: 173498
Number of successful extensions: 508
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 478
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 495
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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