Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS302A08f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    25   0.41 
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    23   2.2  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    23   2.2  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    23   2.2  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    22   2.9  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   5.0  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   6.6  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   6.6  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       21   8.7  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   8.7  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   8.7  

>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 25.0 bits (52), Expect = 0.41
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -1

Query: 317 QFASSMLSPPSTMPWYPSRIKYT 249
           Q  S  LSP S++P YP+R + T
Sbjct: 473 QRTSPQLSPMSSLPPYPNRTQIT 495


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +3

Query: 90  FDYHDGRVSYSEIY 131
           FDY  G++SYS I+
Sbjct: 190 FDYFFGKMSYSHIF 203


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +3

Query: 90  FDYHDGRVSYSEIY 131
           FDY  G++SYS I+
Sbjct: 190 FDYFFGKMSYSHIF 203


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +3

Query: 90  FDYHDGRVSYSEIY 131
           FDY  G++SYS I+
Sbjct: 190 FDYFFGKMSYSHIF 203


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -3

Query: 342 VNYRANRRPVRFFNVITSIYHAL 274
           ++YR +R  +RF  V+  + H L
Sbjct: 1   MSYRLSRNDIRFLKVMYKLSHFL 23


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 348 SFVNYRANRRPVRFFNV 298
           SFVN+R +    RFF +
Sbjct: 288 SFVNFRPSFTAARFFEI 304


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -3

Query: 405 ETTFFFNELHAPS*SNYS 352
           E   FF EL AP   NY+
Sbjct: 306 EAETFFRELEAPCPRNYN 323


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -3

Query: 405 ETTFFFNELHAPS*SNYS 352
           E   FF EL AP   NY+
Sbjct: 306 EAETFFRELEAPCPRNYN 323


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +3

Query: 330 LYNSQRRHYNW 362
           +YNS +R Y W
Sbjct: 148 VYNSMKREYYW 158


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +1

Query: 289 GGDNIEEANWSSVSSII 339
           GGD +    W+S  SI+
Sbjct: 363 GGDEVHLGCWNSTPSIV 379


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +1

Query: 307 EANWSSVSSIIHKG 348
           + +W+S+SS+ H G
Sbjct: 375 DLSWNSISSLSHGG 388


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,889
Number of Sequences: 336
Number of extensions: 2738
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)