Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS302A08f
(521 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g56630.1 68418.m07070 phosphofructokinase family protein simi... 38 0.003
At4g26270.1 68417.m03780 phosphofructokinase family protein simi... 37 0.009
At4g29220.1 68417.m04180 phosphofructokinase family protein simi... 36 0.017
At4g32840.1 68417.m04670 phosphofructokinase family protein simi... 31 0.62
At3g29180.1 68416.m03657 expressed protein 31 0.62
At5g14230.1 68418.m01663 ankyrin repeat family protein contains ... 29 1.9
At5g23170.1 68418.m02710 protein kinase family protein contains ... 29 2.5
At3g58020.1 68416.m06466 DNAJ heat shock N-terminal domain-conta... 28 3.3
At1g54710.1 68414.m06237 expressed protein contains 3 WD-40 repe... 28 3.3
At4g11790.1 68417.m01878 Ran-binding protein 1 domain-containing... 27 5.8
At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid t... 27 5.8
At5g51500.1 68418.m06387 pectinesterase family protein contains ... 27 7.7
At1g62970.1 68414.m07110 DNAJ heat shock N-terminal domain-conta... 27 7.7
>At5g56630.1 68418.m07070 phosphofructokinase family protein similar
to phosphofructokinase [Amycolatopsis methanolica]
GI:17432243; contains Pfam profile PF00365:
Phosphofructokinase
Length = 485
Score = 38.3 bits (85), Expect = 0.003
Identities = 32/100 (32%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Frame = +1
Query: 166 VFTSGGDSQGMNAAVRSVVRMGIYL-GCK-VYFIREGYQGMVDGGDNIEEANWSSVSSII 339
+ T GG G+N +R VV Y+ G K + I GY+G N N V+ I
Sbjct: 96 IVTCGGLCPGLNTVIREVVSSLSYMYGVKRILGIDGGYRGFY--AKNTIPLNSKVVNDIH 153
Query: 340 HKGGTIIGSARCMEFIKKEGRLKAAYNLMSRGITNLVVIG 459
+GGTIIG++R K ++ RGI + +IG
Sbjct: 154 KRGGTIIGTSR-----GGHDTNKIVDSIQDRGINQVYIIG 188
>At4g26270.1 68417.m03780 phosphofructokinase family protein similar
to phosphofructokinase [Amycolatopsis methanolica]
GI:17432243; contains Pfam profile PF00365:
Phosphofructokinase
Length = 489
Score = 36.7 bits (81), Expect = 0.009
Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Frame = +1
Query: 166 VFTSGGDSQGMNAAVRSVVRMGIYL-GCK-VYFIREGYQGMVDGGDNIEEANWSSVSSII 339
+ T GG G+N +R +V Y+ G K + I GY+G N + V+ I
Sbjct: 96 IVTCGGLCPGLNTVIREIVSSLSYMYGVKRILGIDGGYRGFY--AKNTVSLDSKVVNDIH 153
Query: 340 HKGGTIIGSARCMEFIKKEGRLKAAYNLMSRGITNLVVIG 459
+GGTI+G++R K ++ RGI + +IG
Sbjct: 154 KRGGTILGTSR-----GGHDTTKIVDSIQDRGINQVYIIG 188
>At4g29220.1 68417.m04180 phosphofructokinase family protein similar
to phosphofructokinase [Amycolatopsis methanolica]
GI:17432243; contains Pfam profile PF00365:
Phosphofructokinase
Length = 473
Score = 35.9 bits (79), Expect = 0.017
Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Frame = +1
Query: 166 VFTSGGDSQGMNAAVRSVVRMGIYL-GCK-VYFIREGYQGMVDGGDNIEEANWSSVSSII 339
+ T GG G+N +R +V Y+ G K + I GY+G N + +V+ I
Sbjct: 97 IVTCGGLCPGLNTVIREIVCGLSYMYGVKRILGIDGGYRGFY--ARNTIHLDLKTVNDIH 154
Query: 340 HKGGTIIGSARCMEFIKKEGRLKAAYNLMSRGITNLVVIG 459
GGTI+G++R K ++ RGI + +IG
Sbjct: 155 RSGGTILGTSR-----GGHNTTKIVDSIQDRGINQVYIIG 189
>At4g32840.1 68417.m04670 phosphofructokinase family protein similar
to phosphofructokinase [Amycolatopsis methanolica]
GI:17432243; contains Pfam profile PF00365:
Phosphofructokinase
Length = 462
Score = 30.7 bits (66), Expect = 0.62
Identities = 28/101 (27%), Positives = 45/101 (44%), Gaps = 3/101 (2%)
Frame = +1
Query: 166 VFTSGGDSQGMNAAVRSVVRMGI---YLGCKVYFIREGYQGMVDGGDNIEEANWSSVSSI 336
+ T GG G+N +R +V G+ Y +V + G++G N +VS I
Sbjct: 97 IVTCGGLCPGLNTVIREIV-CGLHFMYGVTEVIGVDCGFRGFYS--KNTVALTPKTVSDI 153
Query: 337 IHKGGTIIGSARCMEFIKKEGRLKAAYNLMSRGITNLVVIG 459
+GGTI+G++R K N+ R I + +IG
Sbjct: 154 HKRGGTILGTSR-----GGHDTSKIVDNIQDREINQVYIIG 189
>At3g29180.1 68416.m03657 expressed protein
Length = 513
Score = 30.7 bits (66), Expect = 0.62
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +1
Query: 76 EDYNILITTMDGSATQKFIGRGSHKG-KGLAVFTSGGDSQGMNAA 207
E+Y+ +DGS +KF+ +G +K GL+V T + M+ A
Sbjct: 117 EEYHETYLKIDGSKAEKFVSKGMYKDPSGLSVLTGNNKKKLMDHA 161
>At5g14230.1 68418.m01663 ankyrin repeat family protein contains
ankyrin repeats, Pfam:PF00023
Length = 591
Score = 29.1 bits (62), Expect = 1.9
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = +1
Query: 103 MDGSATQKFI--GRGSHKGKGLAVFTSGGDSQGMNAAVRSVVRMGIYLGCKVYFIREGYQ 276
++GS+ K G+G GKGL + S G + R+VV + +G F R+ +
Sbjct: 477 IEGSSVMKHTKGGKGKKHGKGLRMLESSGVLSWGKSRKRTVVCKEVEIGMSQRF-RKNRK 535
Query: 277 GMVDGGD 297
G DG +
Sbjct: 536 GKGDGAE 542
>At5g23170.1 68418.m02710 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 341
Score = 28.7 bits (61), Expect = 2.5
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1
Query: 79 DYNILITTMDGSATQKFIGRGSH 147
DY+ L+T +D + K IG+GSH
Sbjct: 5 DYDKLVTAIDRFSPSKLIGKGSH 27
>At3g58020.1 68416.m06466 DNAJ heat shock N-terminal
domain-containing protein contains Pfam profile PF00226
DnaJ domain
Length = 580
Score = 28.3 bits (60), Expect = 3.3
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +1
Query: 133 GRGSHKGKGLAVFTSGGDSQGMNAAVRSVVRMGIYLGCKV 252
GRG H G +F GG S N+A MG+ + C V
Sbjct: 36 GRGGHGRGGGGIFFFGGGSHHRNSASVDGSNMGLTVTCLV 75
>At1g54710.1 68414.m06237 expressed protein contains 3 WD-40 repeats
(PF00400) (1 weak) submitForm();
Length = 927
Score = 28.3 bits (60), Expect = 3.3
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = -1
Query: 332 ELTEDQFASSMLSPPSTMPWYPSRIKYTLHPKYMP 228
E+ QF L+P ++PW+ S T H Y P
Sbjct: 482 EIRNSQFDGPTLAPTLSLPWWSSPSFMTTHFSYPP 516
>At4g11790.1 68417.m01878 Ran-binding protein 1 domain-containing
protein / RanBP1 domain-containing protein contains Pfam
profile PF00638: RanBP1 domain
Length = 443
Score = 27.5 bits (58), Expect = 5.8
Identities = 11/43 (25%), Positives = 21/43 (48%)
Frame = +1
Query: 262 REGYQGMVDGGDNIEEANWSSVSSIIHKGGTIIGSARCMEFIK 390
++ + DGGD + + SV KG T++ +C ++K
Sbjct: 294 KQDHSDDADGGDEQSQPSSPSVKKTEEKGITVVHEVKCKLYVK 336
>At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 334
Score = 27.5 bits (58), Expect = 5.8
Identities = 15/54 (27%), Positives = 20/54 (37%)
Frame = -1
Query: 293 PPSTMPWYPSRIKYTLHPKYMPIRTTDRTAAFIP*ESPPLVNTASPLPL*EPRP 132
PP+ P P HPK ++ + P PP V P P +P P
Sbjct: 57 PPAVKPPTPKPPTVKPHPKPPTVKPHPKPPTVKPHPKPPTVKPPHPKPPTKPHP 110
>At5g51500.1 68418.m06387 pectinesterase family protein contains
Pfam profile: PF01095 pectinesterase
Length = 540
Score = 27.1 bits (57), Expect = 7.7
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 154 KGLAVFTSGGDSQGMNAAVRSVVRMGIYLGCKVYFIREGYQ 276
KG+A + G ++G A+RS + I+ C + EGYQ
Sbjct: 318 KGIAFQNTAGPAKGQAVALRSSSDLSIFYRCSI----EGYQ 354
>At1g62970.1 68414.m07110 DNAJ heat shock N-terminal
domain-containing protein low similarity to AHM1
[Triticum aestivum] GI:6691467; contains Pfam profile
PF00226: DnaJ domain
Length = 797
Score = 27.1 bits (57), Expect = 7.7
Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Frame = +1
Query: 142 SHKGKGLAVFTSGGDSQGMNAAVRSVVRMGIYLGCKVYFIR--EGYQGMVDGGDNI 303
SH G G GGD++ M A ++ G G K Y IR E +VD + I
Sbjct: 3 SHGGGGGVSNGGGGDAERMLAQAEKLLLSGDLNGSKTYAIRACEADHSLVDHAELI 58
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,910,863
Number of Sequences: 28952
Number of extensions: 221050
Number of successful extensions: 505
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 493
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 505
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 957410176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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